Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Gm25239-201ENSMUST00000174915 86 ntBASIC33.45■■■□□ 2.95
Lcmt2Q8BYR1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Lcmt2Q8BYR1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Lcmt2Q8BYR1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Lcmt2Q8BYR1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Lcmt2Q8BYR1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Lcmt2Q8BYR1 Psd-208ENSMUST00000224556 2034 ntBASIC29.88■■■□□ 2.37
Lcmt2Q8BYR1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Lcmt2Q8BYR1 Gm15042-201ENSMUST00000120212 883 ntBASIC29.54■■■□□ 2.32
Lcmt2Q8BYR1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Lcmt2Q8BYR1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Lcmt2Q8BYR1 Gm15045-201ENSMUST00000117359 883 ntBASIC28.96■■■□□ 2.23
Lcmt2Q8BYR1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Lcmt2Q8BYR1 Gm24109-201ENSMUST00000175489 103 ntBASIC28.83■■■□□ 2.21
Lcmt2Q8BYR1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.79■■■□□ 2.2
Lcmt2Q8BYR1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Lcmt2Q8BYR1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Lcmt2Q8BYR1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Lcmt2Q8BYR1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Lcmt2Q8BYR1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lcmt2Q8BYR1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Lcmt2Q8BYR1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Lcmt2Q8BYR1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Lcmt2Q8BYR1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Lcmt2Q8BYR1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Lcmt2Q8BYR1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Lcmt2Q8BYR1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Lcmt2Q8BYR1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Lcmt2Q8BYR1 Gm23366-201ENSMUST00000175022 89 ntBASIC27.96■■■□□ 2.07
Lcmt2Q8BYR1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.94■■■□□ 2.06
Lcmt2Q8BYR1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Lcmt2Q8BYR1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Lcmt2Q8BYR1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Lcmt2Q8BYR1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Lcmt2Q8BYR1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.74■■■□□ 2.03
Lcmt2Q8BYR1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Lcmt2Q8BYR1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Lcmt2Q8BYR1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Lcmt2Q8BYR1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Lcmt2Q8BYR1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Lcmt2Q8BYR1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
Lcmt2Q8BYR1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.38■■□□□ 1.97
Lcmt2Q8BYR1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Lcmt2Q8BYR1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.24■■□□□ 1.95
Lcmt2Q8BYR1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Lcmt2Q8BYR1 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.22■■□□□ 1.95
Lcmt2Q8BYR1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Lcmt2Q8BYR1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.17■■□□□ 1.94
Lcmt2Q8BYR1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Lcmt2Q8BYR1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Lcmt2Q8BYR1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Lcmt2Q8BYR1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Lcmt2Q8BYR1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.81■■□□□ 1.88
Lcmt2Q8BYR1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.68■■□□□ 1.86
Lcmt2Q8BYR1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lcmt2Q8BYR1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Lcmt2Q8BYR1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.55■■□□□ 1.84
Lcmt2Q8BYR1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Lcmt2Q8BYR1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Lcmt2Q8BYR1 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.44■■□□□ 1.82
Lcmt2Q8BYR1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lcmt2Q8BYR1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lcmt2Q8BYR1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lcmt2Q8BYR1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Lcmt2Q8BYR1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Lcmt2Q8BYR1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Lcmt2Q8BYR1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
Lcmt2Q8BYR1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Lcmt2Q8BYR1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lcmt2Q8BYR1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Lcmt2Q8BYR1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lcmt2Q8BYR1 Gm25238-201ENSMUST00000174914 89 ntBASIC26.31■■□□□ 1.8
Lcmt2Q8BYR1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lcmt2Q8BYR1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Lcmt2Q8BYR1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Lcmt2Q8BYR1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
Lcmt2Q8BYR1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.21■■□□□ 1.79
Lcmt2Q8BYR1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lcmt2Q8BYR1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Lcmt2Q8BYR1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Lcmt2Q8BYR1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Lcmt2Q8BYR1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Lcmt2Q8BYR1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.01■■□□□ 1.75
Lcmt2Q8BYR1 Gm27325-201ENSMUST00000175467 74 ntBASIC25.96■■□□□ 1.75
Lcmt2Q8BYR1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Lcmt2Q8BYR1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Lcmt2Q8BYR1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Lcmt2Q8BYR1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.87■■□□□ 1.73
Lcmt2Q8BYR1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Lcmt2Q8BYR1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Lcmt2Q8BYR1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Lcmt2Q8BYR1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Lcmt2Q8BYR1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
Lcmt2Q8BYR1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Lcmt2Q8BYR1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Lcmt2Q8BYR1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Lcmt2Q8BYR1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Lcmt2Q8BYR1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Lcmt2Q8BYR1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Lcmt2Q8BYR1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms