RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Txndc15Q6P6J9 344 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 C2cd2lQ80X80 706 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Msl3Q9WVG9 525 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 PurbO35295 324 aaKnown RBP18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Gna12P27600 379 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Ube2e3P52483 207 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Rasa4Q6PFQ7 802 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 ErfeQ6PGN1 340 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Dalrd3Q6PJN8 538 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Tha1Q6XPS7 400 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Snrpb2Q9CQI7 225 aaKnown RBP18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Lgals2Q9CQW5 130 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Gsdmdc1Q9D8T2 487 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Tex22Q9D9U4 189 aa18.4■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Col3a1P08121 1464 aa18.39■□□□□ 0.54
Scaf11-201ENSMUST00000047835 Slc2a3P32037 493 aaKnown RBP18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Zfp868Q3UTQ6 422 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Gpr19Q61121 415 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Rap2cQ8BU31 183 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Anapc2Q8BZQ7 837 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Vps26bQ8C0E2 336 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Mbtps2Q8CHX6 515 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Tmco1Q921L3 188 aaKnown RBP18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Efhc2Q9D485 750 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Ptpn9O35239 593 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Rab17P35292 214 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Ccr4P51680 360 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Gstt2Q61133 244 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Nlgn2Q69ZK9 836 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Lca5lQ8C0X0 741 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Snrnp48Q9D361 337 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Cpne8Q9DC53 577 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Cntnap5aQ0V8T9 1304 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Shmt1P50431 478 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Pcnx4Q3UVY5 1174 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Creb3l2Q8BH52 521 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Hat1Q8BY71 416 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Lrrc42Q8R2U7 421 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Pole3Q9JKP7 145 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 EnpepP16406 945 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 PuraP42669 321 aaKnown RBP18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Atp6v0d1P51863 351 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Map3k3Q61084 626 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Tas2r129Q7M709 320 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Samd3Q8C4H2 520 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Tcf25Q8R3L2 676 aaKnown RBP18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Epm2aip1Q8VEH5 606 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Ptdss1Q99LH2 473 aaKnown RBP18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Ppil6Q9D6D8 278 aa18.39■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Slfn9B1ARD6 910 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Has3O08650 554 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Sod3O09164 251 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Foxr1Q3UTB7 268 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Smarcal1Q8BJL0 910 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Fam110bQ8C739 366 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Gemin6Q9CX53 166 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Ifrd2Q9D8U0 441 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 4932443I19RikA0A286YE38 169 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Gm29394H3BIW7 199 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Azin1O35484 448 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 CcncQ62447 283 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Zbtb24Q80X44 710 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 RhdQ8CF94 418 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Pgm3Q9CYR6 542 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Gm5751A2AHC8 147 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Ptpn3A2ALK8 913 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Xlr5aA2BI45 236 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Gm10717D3Z1I8 228 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Rtn2O70622 471 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 H2-Q7P14429 334 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 H2-Q9P14431 200 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Pcyt1aP49586 367 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Shcbp1lQ3TTP0 639 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Zc3h11aQ6NZF1 792 aaKnown RBP18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Scamp1Q8K021 338 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Trpv3Q8K424 791 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Mapre2Q8R001 326 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Col26a1Q91VF6 440 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Atg7Q9D906 698 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Rsph9Q9D9V4 276 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Nrf1Q9WU00 503 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Vmn2r86G5E8Y4 848 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Nrp1P97333 923 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Lpcat1Q3TFD2 534 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Cep44Q5HZK1 386 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Ccdc32Q8BS39 179 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Gfm2Q8R2Q4 779 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Tas1r3Q925D8 858 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 GsdmcQ99NB5 468 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 CabyrQ9D424 453 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Tmem79Q9D709 391 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 RhojQ9ER71 214 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Smok3cA0A087WSF2 504 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 1600015I10RikE9Q745 711 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Fbxw9F8VPX2 458 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Cer1O55233 272 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 CenpcP49452 906 aaKnown RBP18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Vps45P97390 570 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Luzp2Q8BGY3 345 aa18.38■□□□□ 0.53
Scaf11-201ENSMUST00000047835 Pcdha6Q91Y14 946 aa18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms