Protein–RNA interactions for Protein: O70622

Rtn2, Reticulon-2, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn2O70622 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Rtn2O70622 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
Rtn2O70622 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rtn2O70622 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rtn2O70622 Gm25239-201ENSMUST00000174915 86 ntBASIC32.34■■■□□ 2.77
Rtn2O70622 Psd-208ENSMUST00000224556 2034 ntBASIC32.14■■■□□ 2.74
Rtn2O70622 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Rtn2O70622 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rtn2O70622 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtn2O70622 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rtn2O70622 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rtn2O70622 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rtn2O70622 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rtn2O70622 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Rtn2O70622 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Rtn2O70622 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Rtn2O70622 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Rtn2O70622 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Rtn2O70622 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Rtn2O70622 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rtn2O70622 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rtn2O70622 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Rtn2O70622 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.33■■■□□ 2.29
Rtn2O70622 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rtn2O70622 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.2■■■□□ 2.26
Rtn2O70622 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rtn2O70622 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rtn2O70622 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rtn2O70622 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Rtn2O70622 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.1■■■□□ 2.25
Rtn2O70622 Gm15042-201ENSMUST00000120212 883 ntBASIC29.08■■■□□ 2.25
Rtn2O70622 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rtn2O70622 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Rtn2O70622 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.97■■■□□ 2.23
Rtn2O70622 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rtn2O70622 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rtn2O70622 Gm15045-201ENSMUST00000117359 883 ntBASIC28.6■■■□□ 2.17
Rtn2O70622 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Rtn2O70622 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.58■■■□□ 2.17
Rtn2O70622 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rtn2O70622 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Rtn2O70622 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rtn2O70622 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rtn2O70622 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.39■■■□□ 2.13
Rtn2O70622 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rtn2O70622 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rtn2O70622 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.29■■■□□ 2.12
Rtn2O70622 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rtn2O70622 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Rtn2O70622 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Rtn2O70622 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rtn2O70622 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rtn2O70622 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rtn2O70622 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Rtn2O70622 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.92■■■□□ 2.06
Rtn2O70622 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rtn2O70622 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Rtn2O70622 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rtn2O70622 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Rtn2O70622 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtn2O70622 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtn2O70622 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Rtn2O70622 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rtn2O70622 Gm24109-201ENSMUST00000175489 103 ntBASIC27.67■■■□□ 2.02
Rtn2O70622 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rtn2O70622 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Rtn2O70622 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Rtn2O70622 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rtn2O70622 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.6■■■□□ 2.01
Rtn2O70622 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rtn2O70622 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.55■■■□□ 2
Rtn2O70622 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rtn2O70622 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtn2O70622 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtn2O70622 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rtn2O70622 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Rtn2O70622 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rtn2O70622 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rtn2O70622 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.41■■□□□ 1.98
Rtn2O70622 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.34■■□□□ 1.97
Rtn2O70622 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.29■■□□□ 1.96
Rtn2O70622 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rtn2O70622 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rtn2O70622 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn2O70622 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Rtn2O70622 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rtn2O70622 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtn2O70622 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rtn2O70622 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtn2O70622 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtn2O70622 Gm23366-201ENSMUST00000175022 89 ntBASIC27.11■■□□□ 1.93
Rtn2O70622 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rtn2O70622 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rtn2O70622 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rtn2O70622 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rtn2O70622 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rtn2O70622 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27■■□□□ 1.91
Rtn2O70622 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rtn2O70622 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rtn2O70622 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms