RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Gm4788E9Q8B5 879 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Arfip1G5E8V9 373 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Vmn2r67K7N6T2 851 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Socs2O35717 198 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Cd4P06332 457 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Sstr4P49660 385 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Pim3P58750 326 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Clec4fP70194 548 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Sephs2P97364 452 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Rbm44Q3V089 1013 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Dclk2Q6PGN3 756 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Cfap97Q6ZPR1 541 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Dhx33Q80VY9 698 aaKnown RBP18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gtf2a2Q80ZM7 109 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gprc5aQ8BHL4 356 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Grsf1Q8C5Q4 479 aaKnown RBP18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ifi205aQ8CGE8 404 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Vmn1r205Q8R276 316 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Pcolce2Q8R4W6 414 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Snrpb2Q9CQI7 225 aaKnown RBP18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Tmem135Q9CYV5 458 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 TcimQ9D915 106 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Insl5Q9WUG6 135 aa18.42■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm43518A0A0G2JGB6 165 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ceacam3E9Q6J4 706 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm2832F7AEC7 200 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Slc6a20bO88575 635 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Slc2a3P32037 493 aaKnown RBP18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gpc4P51655 557 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Lrig1P70193 1091 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 CtscP97821 462 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Brms1lQ3U1T3 323 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Fam117bQ3U3E2 584 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 BtrcQ3ULA2 605 aaKnown RBP18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Itpk1Q8BYN3 419 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Slc6a20aQ8VDB9 592 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Pbld2Q9CXN7 288 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Acer3Q9D099 267 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ccdc120A2AEV7 629 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Eif2b3B1AUN2 452 aaKnown RBP18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm14496K7N5U4 849 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Rundc3aO08576 446 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Limk2O54785 638 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ldb2O55203 373 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Slc11a2P49282 568 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 AxlQ00993 888 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Spryd7Q3TFQ1 196 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ddx4Q61496 702 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Olfr667Q7TRP4 326 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ofcc1Q8BGX4 166 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Tgm6Q8BM11 706 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ctxn3Q8BXZ0 80 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Serpina3bQ8BYY9 420 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Vps26bQ8C0E2 336 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Olfr1352Q8VGX5 309 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Pip4k2cQ91XU3 421 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gemin2Q9CQQ4 269 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Jam2Q9JI59 298 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Homer2Q9QWW1 354 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Nme4Q9WV84 186 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ap1m2Q9WVP1 423 aa18.41■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm3604A0A087WPN2 559 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gbp6A0A0G2JDV3 611 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Pdia2D3Z6P0 527 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Herc6F2Z461 1003 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Vmn2r86G5E8Y4 848 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Top3aO70157 1003 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Jak1P52332 1153 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Caprin1Q60865 707 aaKnown RBP18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Eps15l1Q60902 907 aaKnown RBP18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Slc35e2Q8C811 405 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Tp53bp2Q8CG79 1128 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Sdcbp2Q99JZ0 292 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Rhox9Q9EQM5 227 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Asah2Q9JHE3 756 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm3147A0A0J9YU88 481 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm10424A0A0J9YVD0 481 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Cyp4a12bA2A974 508 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm7971J3QMM8 481 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Pde9aO70628 534 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Psmc3O88685 442 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Klk1b8P07628 261 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Prf1P10820 554 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Tgm2P21981 686 aaKnown RBP18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Impdh1P50096 514 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Lhx3P50481 400 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Tmem165P52875 323 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Col28a1Q2UY11 1141 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Fam131bQ3TY60 332 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Lmf1Q3U3R4 574 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Nat9Q3UG98 241 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Sox17Q61473 419 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 CcncQ62447 283 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Lingo3Q6GQU6 589 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Znf219Q6IQX8 726 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Amigo1Q80ZD8 492 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Snx8Q8CFD4 459 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Dennd1cQ8CFK6 786 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Acsm2Q8K0L3 575 aa18.4■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Stx5Q8K1E0 355 aa18.4■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms