Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm25239-201ENSMUST00000174915 86 ntBASIC44.37■■■■■ 4.69
Slc6a20bO88575 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.28■■■■■ 4.2
Slc6a20bO88575 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.09
Slc6a20bO88575 Gm24109-201ENSMUST00000175489 103 ntBASIC38.7■■■■□ 3.79
Slc6a20bO88575 Gm15042-201ENSMUST00000120212 883 ntBASIC38.22■■■■□ 3.71
Slc6a20bO88575 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.5■■■■□ 3.59
Slc6a20bO88575 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
Slc6a20bO88575 Gm15045-201ENSMUST00000117359 883 ntBASIC37.32■■■■□ 3.56
Slc6a20bO88575 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Slc6a20bO88575 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Slc6a20bO88575 Gm23366-201ENSMUST00000175022 89 ntBASIC36.95■■■■□ 3.51
Slc6a20bO88575 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.32■■■■□ 3.4
Slc6a20bO88575 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.94■■■■□ 3.34
Slc6a20bO88575 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.93■■■■□ 3.34
Slc6a20bO88575 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Slc6a20bO88575 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Slc6a20bO88575 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Slc6a20bO88575 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
Slc6a20bO88575 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Slc6a20bO88575 Gm25238-201ENSMUST00000174914 89 ntBASIC35.22■■■■□ 3.23
Slc6a20bO88575 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Slc6a20bO88575 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.21■■■■□ 3.23
Slc6a20bO88575 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Slc6a20bO88575 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Slc6a20bO88575 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Slc6a20bO88575 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
Slc6a20bO88575 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Slc6a20bO88575 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Slc6a20bO88575 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Slc6a20bO88575 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.19■■■■□ 3.06
Slc6a20bO88575 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.18■■■■□ 3.06
Slc6a20bO88575 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
Slc6a20bO88575 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.97■■■■□ 3.03
Slc6a20bO88575 Gm25262-201ENSMUST00000174934 133 ntBASIC33.96■■■■□ 3.03
Slc6a20bO88575 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.96■■■■□ 3.03
Slc6a20bO88575 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.96■■■■□ 3.03
Slc6a20bO88575 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
Slc6a20bO88575 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Slc6a20bO88575 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Slc6a20bO88575 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.64■■■□□ 2.98
Slc6a20bO88575 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.62■■■□□ 2.97
Slc6a20bO88575 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.47■■■□□ 2.95
Slc6a20bO88575 Gm27325-201ENSMUST00000175467 74 ntBASIC33.42■■■□□ 2.94
Slc6a20bO88575 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.39■■■□□ 2.94
Slc6a20bO88575 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Slc6a20bO88575 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
Slc6a20bO88575 Gm26115-201ENSMUST00000175605 87 ntBASIC33.33■■■□□ 2.93
Slc6a20bO88575 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.28■■■□□ 2.92
Slc6a20bO88575 Rab21-202ENSMUST00000218831 843 ntBASIC33.14■■■□□ 2.9
Slc6a20bO88575 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Slc6a20bO88575 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.12■■■□□ 2.89
Slc6a20bO88575 Gm8109-201ENSMUST00000194076 746 ntBASIC33.1■■■□□ 2.89
Slc6a20bO88575 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Slc6a20bO88575 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Slc6a20bO88575 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Slc6a20bO88575 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Slc6a20bO88575 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Slc6a20bO88575 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Slc6a20bO88575 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Slc6a20bO88575 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Slc6a20bO88575 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.77■■■□□ 2.84
Slc6a20bO88575 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.76■■■□□ 2.83
Slc6a20bO88575 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
Slc6a20bO88575 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.58■■■□□ 2.81
Slc6a20bO88575 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.55■■■□□ 2.8
Slc6a20bO88575 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Slc6a20bO88575 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Slc6a20bO88575 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Slc6a20bO88575 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.3■■■□□ 2.76
Slc6a20bO88575 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Slc6a20bO88575 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.26■■■□□ 2.75
Slc6a20bO88575 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Slc6a20bO88575 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Slc6a20bO88575 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Slc6a20bO88575 Psd-208ENSMUST00000224556 2034 ntBASIC32.17■■■□□ 2.74
Slc6a20bO88575 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Slc6a20bO88575 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.12■■■□□ 2.73
Slc6a20bO88575 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Slc6a20bO88575 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Slc6a20bO88575 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.09■■■□□ 2.73
Slc6a20bO88575 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.04■■■□□ 2.72
Slc6a20bO88575 Gm24804-201ENSMUST00000174982 85 ntBASIC31.99■■■□□ 2.71
Slc6a20bO88575 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
Slc6a20bO88575 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.82■■■□□ 2.68
Slc6a20bO88575 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
Slc6a20bO88575 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.77■■■□□ 2.68
Slc6a20bO88575 Gm27322-201ENSMUST00000184007 104 ntBASIC31.76■■■□□ 2.67
Slc6a20bO88575 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Slc6a20bO88575 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
Slc6a20bO88575 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Slc6a20bO88575 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.69■■■□□ 2.66
Slc6a20bO88575 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.65■■■□□ 2.66
Slc6a20bO88575 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.63■■■□□ 2.65
Slc6a20bO88575 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Slc6a20bO88575 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Slc6a20bO88575 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Slc6a20bO88575 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Slc6a20bO88575 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Slc6a20bO88575 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Slc6a20bO88575 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms