Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm25239-201ENSMUST00000174915 86 ntBASIC44,37■■■■■ 4,69
Slc6a20bO88575 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41,28■■■■■ 4,2
Slc6a20bO88575 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40,63■■■■■ 4,09
Slc6a20bO88575 Gm24109-201ENSMUST00000175489 103 ntBASIC38,7■■■■□ 3,79
Slc6a20bO88575 Gm15042-201ENSMUST00000120212 883 ntBASIC38,22■■■■□ 3,71
Slc6a20bO88575 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37,5■■■■□ 3,59
Slc6a20bO88575 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37,39■■■■□ 3,58
Slc6a20bO88575 Gm15045-201ENSMUST00000117359 883 ntBASIC37,32■■■■□ 3,56
Slc6a20bO88575 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37,29■■■■□ 3,56
Slc6a20bO88575 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3,51
Slc6a20bO88575 Gm23366-201ENSMUST00000175022 89 ntBASIC36,95■■■■□ 3,51
Slc6a20bO88575 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36,32■■■■□ 3,4
Slc6a20bO88575 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35,94■■■■□ 3,34
Slc6a20bO88575 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35,93■■■■□ 3,34
Slc6a20bO88575 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35,89■■■■□ 3,34
Slc6a20bO88575 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
Slc6a20bO88575 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35,71■■■■□ 3,31
Slc6a20bO88575 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35,43■■■■□ 3,26
Slc6a20bO88575 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35,37■■■■□ 3,25
Slc6a20bO88575 Gm25238-201ENSMUST00000174914 89 ntBASIC35,22■■■■□ 3,23
Slc6a20bO88575 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35,22■■■■□ 3,23
Slc6a20bO88575 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35,21■■■■□ 3,23
Slc6a20bO88575 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Slc6a20bO88575 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Slc6a20bO88575 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34,65■■■■□ 3,14
Slc6a20bO88575 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34,43■■■■□ 3,1
Slc6a20bO88575 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34,4■■■■□ 3,1
Slc6a20bO88575 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34,32■■■■□ 3,08
Slc6a20bO88575 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34,22■■■■□ 3,07
Slc6a20bO88575 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34,19■■■■□ 3,06
Slc6a20bO88575 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34,18■■■■□ 3,06
Slc6a20bO88575 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34,16■■■■□ 3,06
Slc6a20bO88575 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33,97■■■■□ 3,03
Slc6a20bO88575 Gm25262-201ENSMUST00000174934 133 ntBASIC33,96■■■■□ 3,03
Slc6a20bO88575 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33,96■■■■□ 3,03
Slc6a20bO88575 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33,96■■■■□ 3,03
Slc6a20bO88575 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33,92■■■■□ 3,02
Slc6a20bO88575 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33,9■■■■□ 3,02
Slc6a20bO88575 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33,75■■■□□ 2,99
Slc6a20bO88575 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33,64■■■□□ 2,98
Slc6a20bO88575 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33,62■■■□□ 2,97
Slc6a20bO88575 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33,47■■■□□ 2,95
Slc6a20bO88575 Gm27325-201ENSMUST00000175467 74 ntBASIC33,42■■■□□ 2,94
Slc6a20bO88575 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33,39■■■□□ 2,94
Slc6a20bO88575 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33,34■■■□□ 2,93
Slc6a20bO88575 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33,33■■■□□ 2,93
Slc6a20bO88575 Gm26115-201ENSMUST00000175605 87 ntBASIC33,33■■■□□ 2,93
Slc6a20bO88575 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,28■■■□□ 2,92
Slc6a20bO88575 Rab21-202ENSMUST00000218831 843 ntBASIC33,14■■■□□ 2,9
Slc6a20bO88575 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33,13■■■□□ 2,89
Slc6a20bO88575 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33,12■■■□□ 2,89
Slc6a20bO88575 Gm8109-201ENSMUST00000194076 746 ntBASIC33,1■■■□□ 2,89
Slc6a20bO88575 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33,09■■■□□ 2,89
Slc6a20bO88575 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33,04■■■□□ 2,88
Slc6a20bO88575 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33,01■■■□□ 2,87
Slc6a20bO88575 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32,96■■■□□ 2,87
Slc6a20bO88575 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,93■■■□□ 2,86
Slc6a20bO88575 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32,91■■■□□ 2,86
Slc6a20bO88575 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32,87■■■□□ 2,85
Slc6a20bO88575 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32,86■■■□□ 2,85
Slc6a20bO88575 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32,77■■■□□ 2,84
Slc6a20bO88575 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32,76■■■□□ 2,83
Slc6a20bO88575 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32,76■■■□□ 2,83
Slc6a20bO88575 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32,58■■■□□ 2,81
Slc6a20bO88575 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32,55■■■□□ 2,8
Slc6a20bO88575 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32,48■■■□□ 2,79
Slc6a20bO88575 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32,35■■■□□ 2,77
Slc6a20bO88575 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32,32■■■□□ 2,76
Slc6a20bO88575 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32,3■■■□□ 2,76
Slc6a20bO88575 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32,27■■■□□ 2,76
Slc6a20bO88575 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32,26■■■□□ 2,75
Slc6a20bO88575 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32,24■■■□□ 2,75
Slc6a20bO88575 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32,23■■■□□ 2,75
Slc6a20bO88575 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32,23■■■□□ 2,75
Slc6a20bO88575 Psd-208ENSMUST00000224556 2034 ntBASIC32,17■■■□□ 2,74
Slc6a20bO88575 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32,16■■■□□ 2,74
Slc6a20bO88575 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32,12■■■□□ 2,73
Slc6a20bO88575 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32,11■■■□□ 2,73
Slc6a20bO88575 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32,1■■■□□ 2,73
Slc6a20bO88575 Gm17082-201ENSMUST00000166043 1091 ntBASIC32,09■■■□□ 2,73
Slc6a20bO88575 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32,04■■■□□ 2,72
Slc6a20bO88575 Gm24804-201ENSMUST00000174982 85 ntBASIC31,99■■■□□ 2,71
Slc6a20bO88575 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31,96■■■□□ 2,71
Slc6a20bO88575 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31,82■■■□□ 2,68
Slc6a20bO88575 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31,81■■■□□ 2,68
Slc6a20bO88575 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31,77■■■□□ 2,68
Slc6a20bO88575 Gm27322-201ENSMUST00000184007 104 ntBASIC31,76■■■□□ 2,67
Slc6a20bO88575 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31,75■■■□□ 2,67
Slc6a20bO88575 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31,72■■■□□ 2,67
Slc6a20bO88575 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31,69■■■□□ 2,66
Slc6a20bO88575 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31,69■■■□□ 2,66
Slc6a20bO88575 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31,65■■■□□ 2,66
Slc6a20bO88575 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31,63■■■□□ 2,65
Slc6a20bO88575 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31,58■■■□□ 2,65
Slc6a20bO88575 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31,57■■■□□ 2,64
Slc6a20bO88575 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31,56■■■□□ 2,64
Slc6a20bO88575 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31,54■■■□□ 2,64
Slc6a20bO88575 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Slc6a20bO88575 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Slc6a20bO88575 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,5■■■□□ 2,63
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms