RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 APOBEC2Q9Y235 224 aaKnown RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 CCL26Q9Y258 94 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 SPTBN5Q9NRC6 3674 aaKnown RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 TGM5O43548 720 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 MPOP05164 745 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 PTPN4P29074 926 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 NME5P56597 212 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 RBBP5Q15291 538 aaKnown RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 PARP15Q460N3 678 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 KHDC1Q4VXA5 237 aaKnown RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 PLPP4Q5VZY2 271 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 CLEC6AQ6EIG7 209 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 ZNF549Q6P9A3 640 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 CNKSR3Q6P9H4 555 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 GAREM2Q75VX8 874 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 BBS7Q8IWZ6 715 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 TEX9Q8N6V9 391 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 PDFQ9HBH1 243 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
LIMK1-201ENST00000336180 CFAP97Q9P2B7 532 aa12.63□□□□□ -0.39
LIMK1-201ENST00000336180 HIDE1A8MVS5 230 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 GSC2O15499 205 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 SIN3BO75182 1162 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 KRT36O76013 467 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 TMCC1O94876 653 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 GCKP35557 465 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 STK19P49842 368 aaPredicted RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 NTHL1P78549 312 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 TUBB3Q13509 450 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CDH18Q13634 790 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 POM121L1PQ3SYA9 428 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CXorf57Q6NSI4 855 aaKnown RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 GLT6D1Q7Z4J2 308 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CILP2Q8IUL8 1156 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 SDR16C5Q8N3Y7 309 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 TCEAL4Q96EI5 215 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 MCMBPQ9BTE3 642 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 SPG21Q9NZD8 308 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 FKBPLQ9UIM3 349 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 RAI2Q9Y5P3 530 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 TGDSO95455 350 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 TFEBP19484 476 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 PGM1P36871 562 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 MAGEA12P43365 314 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CBLBQ13191 982 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 NAB1Q13506 487 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CBX2Q14781 532 aaPredicted RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 SH2D4BQ5SQS7 431 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 ADGRF1Q5T601 910 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 KIAA0930Q6ICG6 404 aaPredicted RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 GPR78Q96P69 363 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 NUDCD1Q96RS6 583 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 BTBD10Q9BSF8 475 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 SAR1AQ9NR31 198 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 MRPL17Q9NRX2 175 aaKnown RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 OXSMQ9NWU1 459 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 EVLQ9UI08 416 aaPredicted RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CD3EAPO15446 510 aaKnown RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 FGF18O76093 207 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 SNUPNO95149 360 aaKnown RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 S1PR4O95977 384 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 HADHAP40939 763 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CTSOP43234 321 aaPredicted RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 TRAF2Q12933 501 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CCDC153Q494R4 210 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 ZRANB3Q5FWF4 1079 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 RABGAP1LQ5R372 815 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 PIANPQ8IYJ0 282 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 ADAMTS19Q8TE59 1207 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
LIMK1-201ENST00000336180 SLC30A3Q99726 388 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 TTLL2Q9BWV7 592 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 CERS4Q9HA82 394 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 IGSF5Q9NSI5 407 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 HCFC2Q9Y5Z7 792 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 SLC4A7Q9Y6M7 1214 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 COL4A6Q14031 1691 aa12.62□□□□□ -0.39
LIMK1-201ENST00000336180 MIA3Q5JRA6 1907 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 PER2O15055 1255 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 ABLIM3O94929 683 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 CD160O95971 181 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 MYOGP15173 224 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 CA5AP35218 305 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 EPHB3P54753 998 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 NRG1Q02297 640 aaPredicted RBP12.61□□□□□ -0.39
LIMK1-201ENST00000336180 RING1Q06587 406 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 NSUN2Q08J23 767 aaKnown RBP eCLIP12.61□□□□□ -0.39
LIMK1-201ENST00000336180 RBM23Q86U06 439 aaKnown RBP12.61□□□□□ -0.39
LIMK1-201ENST00000336180 LSMEM2Q8N112 164 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 TEX26Q8N6G2 289 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 KLF16Q9BXK1 252 aaPredicted RBP12.61□□□□□ -0.39
LIMK1-201ENST00000336180 IKZF3Q9UKT9 509 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 ZNF195O14628 629 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 CXCL14O95715 111 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 PRLP01236 227 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 CDH4P55283 916 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 DSG1Q02413 1049 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 CUL3Q13618 768 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms