RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 GOLGA2P5Q9HBQ8 144 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 AGPAT4Q9NRZ5 378 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 GTSE1Q9NYZ3 720 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 KLK14Q9P0G3 267 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 EGFL7Q9UHF1 273 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 POU2F3Q9UKI9 436 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 USP3Q9Y6I4 520 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 SRP72O76094 671 aaKnown RBP18.74■□□□□ 0.59
SCARF1-202ENST00000348987 LRPAP1P30533 357 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 PTPN9P43378 593 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 PCYT1AP49585 367 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 GRM3Q14832 879 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 SMYD5Q6GMV2 418 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 SPPL2BQ8TCT7 592 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 SLC2A14Q8TDB8 520 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 NSMCE3Q96MG7 304 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 SETD4Q9NVD3 440 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 IFT80Q9P2H3 777 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-202ENST00000348987 PSME2Q9UL46 239 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 NOX1Q9Y5S8 564 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 DGKBQ9Y6T7 804 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 ZCWPW2A0A1B0GU75 182 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 DHRS12A0PJE2 317 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 TRPC5OSA6NMA1 111 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 APOA4P06727 396 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 SNRPB2P08579 225 aaKnown RBP18.73■□□□□ 0.59
SCARF1-202ENST00000348987 NR4A1P22736 598 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 HPCAL1P37235 193 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 MPP1Q00013 466 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 SF3B4Q15427 424 aaKnown RBP eCLIP18.73■□□□□ 0.594e-7■■■■■ 28.1
SCARF1-202ENST00000348987 ZBTB6Q15916 424 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 GRIK4Q16099 956 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 FAM219BQ5XKK7 198 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 COLGALT2Q8IYK4 626 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 DHRSXQ8N5I4 330 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 ABHD11Q8NFV4 315 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 RDH11Q8TC12 318 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 P2RY11Q96G91 374 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 LRCH3Q96II8 777 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 ZNF347Q96SE7 839 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 CGREF1Q99674 301 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 TUBA1CQ9BQE3 449 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 C9orf16Q9BUW7 83 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 LRRC40Q9H9A6 602 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 ACOX3O15254 700 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 FASP25445 335 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 TKTP29401 623 aaKnown RBP18.73■□□□□ 0.59
SCARF1-202ENST00000348987 ATP6AP1Q15904 470 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 CYBRD1Q53TN4 286 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 PPTC7Q8NI37 304 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 SH3YL1Q96HL8 342 aaPredicted RBP18.73■□□□□ 0.59
SCARF1-202ENST00000348987 TSNARE1Q96NA8 513 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 FTHL17Q9BXU8 183 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 EHD1Q9H4M9 534 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 IL1RL2Q9HB29 575 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 CD320Q9NPF0 282 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 EIF2B3Q9NR50 452 aaKnown RBP18.73■□□□□ 0.59
SCARF1-202ENST00000348987 IARS2Q9NSE4 1012 aaKnown RBP18.73■□□□□ 0.59
SCARF1-202ENST00000348987 PKD2L2Q9NZM6 624 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 TRAF6Q9Y4K3 522 aa18.73■□□□□ 0.59
SCARF1-202ENST00000348987 UBDO15205 165 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 CPNE6O95741 557 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 HLCSP50747 726 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 RABGGTBP53611 331 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 MAPRE2Q15555 327 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 FRA10AC1Q70Z53 315 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 PIWIL3Q7Z3Z3 882 aaKnown RBP18.72■□□□□ 0.59
SCARF1-202ENST00000348987 TTC39CQ8N584 583 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 MAGEE2Q8TD90 523 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-202ENST00000348987 STYXQ8WUJ0 223 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 FAM149B1Q96BN6 582 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 DNAI2Q9GZS0 605 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 RAD21L1Q9H4I0 556 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 MROH8Q9H579 483 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 SCHIP1Q9P0W5 487 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-202ENST00000348987 XPR1Q9UBH6 696 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 ASB14A6NK59 587 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 TIMM44O43615 452 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 NRP2O60462 931 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 IGFBP6P24592 240 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-202ENST00000348987 ELK4P28324 431 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 OXTRP30559 389 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 CAPGP40121 348 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 CCT8P50990 548 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 CSE1LP55060 971 aaKnown RBP18.72■□□□□ 0.59
SCARF1-202ENST00000348987 DNASE1L3Q13609 305 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 PRPSAP1Q14558 356 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 ZNF460Q14592 562 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 PGS1Q32NB8 556 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 C9orf57Q5W0N0 161 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 CNSTQ6PJW8 725 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 CCNYQ8ND76 341 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 USP33Q8TEY7 942 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 SEZ6LQ9BYH1 1024 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 LHPPQ9H008 270 aa18.72■□□□□ 0.59
SCARF1-202ENST00000348987 CLDN25C9JDP6 229 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 JRKO75564 520 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 RECQL4O94761 1208 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 TOMM70O94826 608 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 RASAL1O95294 804 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms