RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 EDEM1Q92611 657 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PCED1BQ96HM7 432 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CNDP1Q96KN2 507 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TSEN34Q9BSV6 310 aaKnown RBP16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SNX15Q9NRS6 342 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 VPS45Q9NRW7 570 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ADA2Q9NZK5 511 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NOX1Q9Y5S8 564 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 VAPBO95292 243 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 LTFP02788 710 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PABPC1P11940 636 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RCVRNP35243 200 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RPL34P49207 117 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 BMXP51813 675 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TUBA4AP68366 448 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 BNIP3Q12983 259 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 OLIG2Q13516 323 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DSC3Q14574 896 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FGD3Q5JSP0 725 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PAWRQ96IZ0 340 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CLK4Q9HAZ1 481 aaKnown RBP16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NCKIPSDQ9NZQ3 722 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CORINQ9Y5Q5 1042 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SNX10Q9Y5X0 201 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CHD9Q3L8U1 2897 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 G3V2L1 256 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SULT1C4O75897 302 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DDHD2O94830 711 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FYNP06241 537 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 INHBBP09529 407 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TPSB2P20231 275 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MGAT1P26572 445 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GABRB3P28472 473 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DPYSQ14117 519 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TPSAB1Q15661 275 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TIGD5Q53EQ6 642 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 STEAP4Q687X5 459 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 STRADAQ7RTN6 431 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HTR3CQ8WXA8 447 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SMOQ99835 787 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TXNDC16Q9P2K2 825 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 USP3Q9Y6I4 520 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TTC3P53804 2025 aa16.05■□□□□ 0.16
MAP1LC3B-201ENST00000268607 I6L893 689 aaPredicted RBP16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 BMP10O95393 424 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 LRPAP1P30533 357 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ESRRGP62508 458 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 IRF9Q00978 393 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PTK2BQ14289 1009 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CLLU1OSQ5K130 101 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CYS1Q717R9 158 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RNF139Q8WU17 664 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CGREF1Q99674 301 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 EFCAB1Q9HAE3 211 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SACM1LQ9NTJ5 587 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GIN1Q9NXP7 522 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 VPS51Q9UID3 782 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 KCNK1O00180 336 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GABRDO14764 452 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GIPC1O14908 333 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ABCG1P45844 678 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ITGADQ13349 1161 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NR1D2Q14995 579 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DCLK2Q8N568 766 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PCDH20Q8N6Y1 951 aaKnown RBP16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TRPC4APQ8TEL6 797 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TMEM209Q96SK2 561 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GATA5Q9BWX5 397 aaPredicted RBP16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ILKAPQ9H0C8 392 aaPredicted RBP16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NOL11Q9H8H0 719 aaKnown RBP16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CHST12Q9NRB3 414 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MAGED2Q9UNF1 606 aaPredicted RBP16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NUP205Q92621 2012 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HTRA2O43464 458 aaPredicted RBP16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GCATO75600 419 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NCAM1P13591 858 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SELPP16109 830 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CKMT2P17540 419 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ITGB8P26012 769 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NOS2P35228 1153 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 KCNC4Q03721 635 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 IFRD2Q12894 506 aaPredicted RBP16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DLG2Q15700 870 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RGS21Q2M5E4 152 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ZBED5Q49AG3 693 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SEL1L3Q68CR1 1132 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 LYSMD3Q7Z3D4 306 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SETD3Q86TU7 594 aaPredicted RBP16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HACE1Q8IYU2 909 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ZMIZ2Q8NF64 920 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HM13Q8TCT9 377 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SGF29Q96ES7 293 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NSMCE3Q96MG7 304 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 QKIQ96PU8 341 aaKnown RBP eCLIP16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NPY6RQ99463 290 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms