RNA–Protein interactions for RNA: ENST00000355540.7

TRRAP-201, Transcript of transformation/transcription domain associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRRAP, Length 12,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAP-201ENST00000355540 TEX47Q8TBZ9 253 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 UPF1Q92900 1129 aaKnown RBP eCLIP7.34□□□□□ -1.232e-7■□□□□ 8.1
TRRAP-201ENST00000355540 PSMB7Q99436 277 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 OR6B1O95007 311 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 ARCN1P48444 511 aaKnown RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 PKNOX1P55347 436 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 CDC16Q13042 620 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 KRT31Q15323 416 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 FOXR1Q6PIV2 292 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 ZNF548Q8NEK5 533 aaPredicted RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 TRIB2Q92519 343 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 ZNF184Q99676 751 aaPredicted RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 SPOCK3Q9BQ16 436 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 TRMT13Q9NUP7 481 aaKnown RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 C17orf102A2RUQ5 167 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 ASS1P00966 412 aaKnown RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 ELK3P41970 407 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 SPP2Q13103 211 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 TAF1CQ15572 869 aaPredicted RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 UBE2SQ16763 222 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 CHST12Q9NRB3 414 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 VANGL2Q9ULK5 521 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 AP1M2Q9Y6Q5 423 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 ARHGEF17Q96PE2 2063 aaPredicted RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 RAB19A4D1S5 217 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 RGSL1A5PLK6 1076 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 MCIDASD6RGH6 385 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 PGAM1P18669 254 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 RPL26P61254 145 aaKnown RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 PTAR1Q7Z6K3 402 aaPredicted RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 RANBP3LQ86VV4 465 aaPredicted RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 MMAAQ8IVH4 418 aaKnown RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 SKA3Q8IX90 412 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 KATNAL2Q8IYT4 538 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 KCNN1Q92952 543 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 POLR1EQ9GZS1 481 aaKnown RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 PNPLA3Q9NST1 481 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 FNIP2Q9P278 1114 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 VPS4AQ9UN37 437 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 ZNF407Q9C0G0 2248 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 UBDO15205 165 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 C1QBPQ07021 282 aaKnown RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 EPHA10Q5JZY3 1008 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 DNAJC14Q6Y2X3 702 aaPredicted RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 DENND2DQ9H6A0 471 aaPredicted RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 RAB6BQ9NRW1 208 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 TMEM63CQ9P1W3 806 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 BTN3A3O00478 584 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 RAD51CO43502 376 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 TFRCP02786 760 aaKnown RBP7.34□□□□□ -1.23
TRRAP-201ENST00000355540 NEK3P51956 506 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 NR1H2P55055 460 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 CDO1Q16878 200 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 VMACQ2NL98 169 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 RINLQ6ZS11 566 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 TBC1D21Q8IYX1 336 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 B3GAT2Q9NPZ5 323 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 HPS4Q9NQG7 708 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 STARD7Q9NQZ5 370 aa7.34□□□□□ -1.23
TRRAP-201ENST00000355540 CHRNGP07510 517 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 CBSLP0DN79 551 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 CBSP35520 551 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 RPIAP49247 311 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 DRAP1Q14919 205 aaPredicted RBP7.34□□□□□ -1.24
TRRAP-201ENST00000355540 CERS6Q6ZMG9 384 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 C11orf74Q86VG3 221 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 ZSCAN1Q8NBB4 408 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 HIST1H2AAQ96QV6 131 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 HEPHQ9BQS7 1158 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 FAM213AQ9BRX8 229 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 CLIC4Q9Y696 253 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 CACNA1DQ01668 2161 aa7.34□□□□□ -1.24
TRRAP-201ENST00000355540 XRN1Q8IZH2 1706 aaKnown RBP7.34□□□□□ -1.24
TRRAP-201ENST00000355540 HTR3EA5X5Y0 456 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 BMP4P12644 408 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 HMGCS2P54868 508 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 LRRC20Q8TCA0 184 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 AGPAT1Q99943 283 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 ACTR6Q9GZN1 396 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 USP42Q9H9J4 1324 aaKnown RBP7.33□□□□□ -1.24
TRRAP-201ENST00000355540 SSNA1O43805 119 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 GLI1P08151 1106 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 TSPAN8P19075 237 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 CCNFP41002 786 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 TRIM28Q13263 835 aaKnown RBP7.33□□□□□ -1.24
TRRAP-201ENST00000355540 MPPE1Q53F39 396 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 RSBN1Q5VWQ0 802 aaPredicted RBP7.33□□□□□ -1.24
TRRAP-201ENST00000355540 PET117Q6UWS5 81 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 GALNT12Q8IXK2 581 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 FAM126BQ8IXS8 530 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 SFRP1Q8N474 314 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 SPATA4Q8NEY3 305 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 ATXN2LQ8WWM7 1075 aaKnown RBP7.33□□□□□ -1.24
TRRAP-201ENST00000355540 ZNF347Q96SE7 839 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 ATP12AP54707 1039 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 FKBP1CQ5VVH2 108 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 ANKRD26P1Q6NSI1 321 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 ATP13A1Q9HD20 1204 aa7.33□□□□□ -1.24
TRRAP-201ENST00000355540 SCN4AP35499 1836 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms