RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 YER158CP40095 573 aa1.22□□□□□ -2.21
snR50snR50 UBA2P52488 636 aa1.22□□□□□ -2.21
snR50snR50 MCM6P53091 1017 aaKnown RBP1.22□□□□□ -2.21
snR50snR50 TMA10Q06177 86 aa1.22□□□□□ -2.21
snR50snR50 SSA2P10592 639 aaKnown RBP1.21□□□□□ -2.22
snR50snR50 SAM35P14693 329 aa1.21□□□□□ -2.22
snR50snR50 MRPL33P20084 86 aa1.21□□□□□ -2.22
snR50snR50 RIM21P48565 533 aa1.21□□□□□ -2.22
snR50snR50 CAB1Q04430 367 aa1.21□□□□□ -2.22
snR50snR50 HOF1Q05080 669 aa1.21□□□□□ -2.22
snR50snR50 URN1Q06525 465 aaKnown RBP1.21□□□□□ -2.22
snR50snR50 KIN1P13185 1064 aa1.2□□□□□ -2.22
snR50snR50 MSN1P22148 382 aa1.2□□□□□ -2.22
snR50snR50 TMN2Q04562 672 aa1.2□□□□□ -2.22
snR50snR50 SGD1Q06132 899 aa1.2□□□□□ -2.22
snR50snR50 CDC20P26309 610 aa1.19□□□□□ -2.22
snR50snR50 DCG1P32460 244 aa1.19□□□□□ -2.22
snR50snR50 FET4P40988 552 aa1.19□□□□□ -2.22
snR50snR50 PLB2Q03674 706 aa1.19□□□□□ -2.22
snR50snR50 CDC6P09119 513 aa1.18□□□□□ -2.22
snR50snR50 GCV1P48015 400 aa1.18□□□□□ -2.22
snR50snR50 ACS2P52910 683 aaKnown RBP1.18□□□□□ -2.22
snR50snR50 BIO2P32451 375 aa1.17□□□□□ -2.22
snR50snR50 SMY2P32909 740 aaKnown RBP1.17□□□□□ -2.22
snR50snR50 NOP1P15646 327 aaKnown RBP1.16□□□□□ -2.22
snR50snR50 SUV3P32580 737 aa1.16□□□□□ -2.22
snR50snR50 PEX2P32800 271 aa1.16□□□□□ -2.22
snR50snR50 GLO1P50107 326 aa1.16□□□□□ -2.22
snR50snR50 FOL2P51601 243 aaKnown RBP1.16□□□□□ -2.22
snR50snR50 SEC5P89102 971 aa1.16□□□□□ -2.22
snR50snR50 YLL054CQ12244 843 aa1.16□□□□□ -2.22
snR50snR50 PUF4P25339 888 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
snR50snR50 YBL036CP38197 257 aa1.15□□□□□ -2.23
snR50snR50 STU2P46675 888 aa1.15□□□□□ -2.23
snR50snR50 IRC10Q08118 586 aa1.15□□□□□ -2.23
snR50snR50 PUS7Q08647 676 aaKnown RBP1.15□□□□□ -2.23
snR50snR50 YIG1Q08956 461 aa1.15□□□□□ -2.23
snR50snR50 ALG6Q12001 544 aaKnown RBP1.15□□□□□ -2.23
snR50snR50 ROT1Q03691 256 aa1.14□□□□□ -2.23
snR50snR50 AIM46P38885 310 aa1.13□□□□□ -2.23
snR50snR50 STB2P46679 850 aa1.13□□□□□ -2.23
snR50snR50 YGR045CP53229 120 aa1.13□□□□□ -2.23
snR50snR50 GIS2P53849 153 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
snR50snR50 MEC3Q02574 474 aa1.13□□□□□ -2.23
snR50snR50 MRX10Q05648 414 aa1.13□□□□□ -2.23
snR50snR50 ACK1Q07622 623 aaPredicted RBP1.13□□□□□ -2.23
snR50snR50 PEP12P32854 288 aa1.12□□□□□ -2.23
snR50snR50 RGD2P43556 714 aa1.12□□□□□ -2.23
snR50snR50 COQ11Q05892 277 aa1.12□□□□□ -2.23
snR50snR50 GAS4Q08271 471 aa1.12□□□□□ -2.23
snR50snR50 CYC1P00044 109 aaPredicted RBP1.11□□□□□ -2.23
snR50snR50 STE4P18851 423 aa1.11□□□□□ -2.23
snR50snR50 MDL2P33311 773 aa1.11□□□□□ -2.23
snR50snR50 NNK1P36003 928 aa1.11□□□□□ -2.23
snR50snR50 YBR197CP38306 217 aa1.11□□□□□ -2.23
snR50snR50 ELA1P53861 379 aaPredicted RBP1.11□□□□□ -2.23
snR50snR50 YNL108CP53929 270 aa1.11□□□□□ -2.23
snR50snR50 PHO87P25360 923 aa1.1□□□□□ -2.23
snR50snR50 AIM26P32858 118 aa1.1□□□□□ -2.23
snR50snR50 DED81P38707 554 aaKnown RBP1.1□□□□□ -2.23
snR50snR50 YHL012WP38709 493 aa1.1□□□□□ -2.23
snR50snR50 BPL1P48445 690 aaPredicted RBP1.1□□□□□ -2.23
snR50snR50 ROM1P53046 1155 aa1.1□□□□□ -2.23
snR50snR50 IMO32P53219 342 aa1.1□□□□□ -2.23
snR50snR50 TPP1Q03796 238 aa1.1□□□□□ -2.23
snR50snR50 BNR1P40450 1375 aa1.09□□□□□ -2.23
snR50snR50 HTS1P07263 546 aaKnown RBP1.09□□□□□ -2.23
snR50snR50 SRM1P21827 482 aa1.09□□□□□ -2.23
snR50snR50 PYC2P32327 1180 aaKnown RBP1.09□□□□□ -2.23
snR50snR50 KTR2P33550 425 aa1.09□□□□□ -2.23
snR50snR50 REI1P38344 393 aaPredicted RBP1.09□□□□□ -2.23
snR50snR50 YBR287WP38355 427 aa1.09□□□□□ -2.23
snR50snR50 ENV11P53246 860 aa1.09□□□□□ -2.23
snR50snR50 VPS62P53285 467 aa1.09□□□□□ -2.23
snR50snR50 TDA9Q04545 1251 aa1.09□□□□□ -2.23
snR50snR50 YLR224WQ05947 369 aa1.09□□□□□ -2.23
snR50snR50 HRR25P29295 494 aaKnown RBP1.08□□□□□ -2.24
snR50snR50 FOX2Q02207 900 aaKnown RBP1.08□□□□□ -2.24
snR50snR50 YOR352WQ08816 343 aa1.08□□□□□ -2.24
snR50snR50 SUT2Q12286 268 aa1.08□□□□□ -2.24
snR50snR50 SRS2P12954 1174 aa1.07□□□□□ -2.24
snR50snR50 HAP4P14064 554 aa1.07□□□□□ -2.24
snR50snR50 MTH1P35198 433 aa1.07□□□□□ -2.24
snR50snR50 FLO10P36170 1169 aa1.07□□□□□ -2.24
snR50snR50 SIP5P40210 489 aaKnown RBP1.07□□□□□ -2.24
snR50snR50 STB4P50104 949 aa1.07□□□□□ -2.24
snR50snR50 YAP6Q03935 383 aa1.07□□□□□ -2.24
snR50snR50 RXT3Q07458 294 aa1.07□□□□□ -2.24
snR50snR50 GPB1Q08886 897 aa1.07□□□□□ -2.24
snR50snR50 YNL162W-AQ3E7A8 72 aa1.07□□□□□ -2.24
snR50snR50 SRO9P25567 434 aaKnown RBP1.06□□□□□ -2.24
snR50snR50 NMD3P38861 518 aaKnown RBP1.06□□□□□ -2.24
snR50snR50 MET30P39014 640 aa1.06□□□□□ -2.24
snR50snR50 HNT2P49775 206 aa1.06□□□□□ -2.24
snR50snR50 RSC58Q07979 502 aa1.06□□□□□ -2.24
snR50snR50 MCH5Q08777 521 aa1.06□□□□□ -2.24
snR50snR50 MSL5Q12186 476 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
snR50snR50 ENO1P00924 437 aaKnown RBP1.05□□□□□ -2.24
snR50snR50 PRP5P21372 849 aaPredicted RBP1.05□□□□□ -2.24
snR50snR50 RIM11P38615 370 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms