RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 LAM1P38851 1228 aa1.11□□□□□ -2.23
snR38snR38 MEF2P39677 819 aa1.11□□□□□ -2.23
snR38snR38 FIR1P40020 876 aa1.11□□□□□ -2.23
snR38snR38 QRI1P43123 477 aaKnown RBP1.11□□□□□ -2.23
snR38snR38 HNT2P49775 206 aa1.11□□□□□ -2.23
snR38snR38 GLO1P50107 326 aa1.11□□□□□ -2.23
snR38snR38 GAS4Q08271 471 aa1.11□□□□□ -2.23
snR38snR38 VMA3P25515 160 aa1.1□□□□□ -2.23
snR38snR38 NNK1P36003 928 aa1.1□□□□□ -2.23
snR38snR38 AIM46P38885 310 aa1.1□□□□□ -2.23
snR38snR38 EAR1Q03212 550 aa1.1□□□□□ -2.23
snR38snR38 HAP4P14064 554 aa1.09□□□□□ -2.23
snR38snR38 MRPL33P20084 86 aa1.09□□□□□ -2.23
snR38snR38 YUR1P26725 428 aa1.09□□□□□ -2.23
snR38snR38 MDL2P33311 773 aa1.09□□□□□ -2.23
snR38snR38 KIN4Q01919 800 aa1.09□□□□□ -2.23
snR38snR38 EMG1Q06287 252 aaKnown RBP1.09□□□□□ -2.23
snR38snR38 AIM26P32858 118 aa1.08□□□□□ -2.24
snR38snR38 DEF1P35732 738 aaKnown RBP1.08□□□□□ -2.24
snR38snR38 YHL012WP38709 493 aa1.08□□□□□ -2.24
snR38snR38 TMA10Q06177 86 aa1.08□□□□□ -2.24
snR38snR38 RXT3Q07458 294 aa1.08□□□□□ -2.24
snR38snR38 NBA1Q08229 501 aaKnown RBP1.08□□□□□ -2.24
snR38snR38 SAS10Q12136 610 aaPredicted RBP1.08□□□□□ -2.24
snR38snR38 PMA1P05030 918 aaKnown RBP1.07□□□□□ -2.24
snR38snR38 HVG1P0CE11 249 aa1.07□□□□□ -2.24
snR38snR38 MSS4P38994 779 aa1.07□□□□□ -2.24
snR38snR38 STB2P46679 850 aa1.07□□□□□ -2.24
snR38snR38 RIM21P48565 533 aa1.07□□□□□ -2.24
snR38snR38 PHO23P50947 330 aa1.07□□□□□ -2.24
snR38snR38 UBP3Q01477 912 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
snR38snR38 TIM44Q01852 431 aa1.07□□□□□ -2.24
snR38snR38 YIG1Q08956 461 aa1.07□□□□□ -2.24
snR38snR38 ENO2P00925 437 aaKnown RBP1.06□□□□□ -2.24
snR38snR38 SPS1P08458 490 aa1.06□□□□□ -2.24
snR38snR38 MSN1P22148 382 aa1.06□□□□□ -2.24
snR38snR38 PHO87P25360 923 aa1.06□□□□□ -2.24
snR38snR38 LST4P34239 828 aa1.06□□□□□ -2.24
snR38snR38 REI1P38344 393 aaPredicted RBP1.06□□□□□ -2.24
snR38snR38 PBP1P53297 722 aaKnown RBP1.06□□□□□ -2.24
snR38snR38 MEC3Q02574 474 aa1.06□□□□□ -2.24
snR38snR38 TPP1Q03796 238 aa1.06□□□□□ -2.24
snR38snR38 COQ11Q05892 277 aa1.06□□□□□ -2.24
snR38snR38 ACK1Q07622 623 aaPredicted RBP1.06□□□□□ -2.24
snR38snR38 AIM39Q08223 395 aa1.06□□□□□ -2.24
snR38snR38 AVO1Q08236 1176 aa1.06□□□□□ -2.24
snR38snR38 PUS7Q08647 676 aaKnown RBP1.06□□□□□ -2.24
snR38snR38 GLO4Q12320 285 aa1.06□□□□□ -2.24
snR38snR38 SUP45P12385 437 aaKnown RBP1.05□□□□□ -2.24
snR38snR38 VAN1P23642 535 aa1.05□□□□□ -2.24
snR38snR38 SRO9P25567 434 aaKnown RBP1.05□□□□□ -2.24
snR38snR38 DCG1P32460 244 aa1.05□□□□□ -2.24
snR38snR38 SLX1P38324 304 aa1.05□□□□□ -2.24
snR38snR38 BRL1P38770 471 aa1.05□□□□□ -2.24
snR38snR38 FOX2Q02207 900 aaKnown RBP1.05□□□□□ -2.24
snR38snR38 MCH5Q08777 521 aa1.05□□□□□ -2.24
snR38snR38 TRS33Q99394 268 aa1.05□□□□□ -2.24
snR38snR38 KIN1P13185 1064 aa1.04□□□□□ -2.24
snR38snR38 MDM10P18409 493 aa1.04□□□□□ -2.24
snR38snR38 CDC20P26309 610 aa1.04□□□□□ -2.24
snR38snR38 ACS2P52910 683 aaKnown RBP1.04□□□□□ -2.24
snR38snR38 MRPS35P53292 345 aa1.04□□□□□ -2.24
snR38snR38 ELA1P53861 379 aaPredicted RBP1.04□□□□□ -2.24
snR38snR38 YNL108CP53929 270 aa1.04□□□□□ -2.24
snR38snR38 CAB1Q04430 367 aa1.04□□□□□ -2.24
snR38snR38 IRC10Q08118 586 aa1.04□□□□□ -2.24
snR38snR38 YNL162W-AQ3E7A8 72 aa1.04□□□□□ -2.24
snR38snR38 CYC1P00044 109 aaPredicted RBP1.03□□□□□ -2.24
snR38snR38 PEX2P32800 271 aa1.03□□□□□ -2.24
snR38snR38 ROT1Q03691 256 aa1.03□□□□□ -2.24
snR38snR38 DUS4Q06063 367 aa1.03□□□□□ -2.24
snR38snR38 ALG6Q12001 544 aaKnown RBP1.03□□□□□ -2.24
snR38snR38 SAM35P14693 329 aa1.02□□□□□ -2.25
snR38snR38 LEO1P38439 464 aa1.02□□□□□ -2.25
snR38snR38 UTP22P53254 1237 aaPredicted RBP1.02□□□□□ -2.25
snR38snR38 NPL3Q01560 414 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
snR38snR38 HRK1Q08732 759 aaKnown RBP1.02□□□□□ -2.25
snR38snR38 GPB1Q08886 897 aa1.02□□□□□ -2.25
snR38snR38 MCM5P29496 775 aaKnown RBP1.01□□□□□ -2.25
snR38snR38 BIO2P32451 375 aa1.01□□□□□ -2.25
snR38snR38 ARL1P38116 183 aaKnown RBP1.01□□□□□ -2.25
snR38snR38 HXT8P40886 569 aa1.01□□□□□ -2.25
snR38snR38 IMO32P53219 342 aa1.01□□□□□ -2.25
snR38snR38 YGR045CP53229 120 aa1.01□□□□□ -2.25
snR38snR38 TMN2Q04562 672 aa1.01□□□□□ -2.25
snR38snR38 HTS1P07263 546 aaKnown RBP1□□□□□ -2.25
snR38snR38 HRR25P29295 494 aaKnown RBP1□□□□□ -2.25
snR38snR38 HSE1P38753 452 aa1□□□□□ -2.25
snR38snR38 OMS1Q06668 471 aa1□□□□□ -2.25
snR38snR38 ACF2Q12168 779 aa1□□□□□ -2.25
snR38snR38 ILV6P25605 309 aaKnown RBP0.99□□□□□ -2.25
snR38snR38 SEC26P41810 973 aaKnown RBP0.99□□□□□ -2.25
snR38snR38 YLR224WQ05947 369 aa0.99□□□□□ -2.25
snR38snR38 RSC58Q07979 502 aa0.99□□□□□ -2.25
snR38snR38 PFK1P16861 987 aaKnown RBP0.98□□□□□ -2.25
snR38snR38 PYC2P32327 1180 aaKnown RBP0.98□□□□□ -2.25
snR38snR38 CCZ1P38273 704 aa0.98□□□□□ -2.25
snR38snR38 YBR197CP38306 217 aa0.98□□□□□ -2.25
snR38snR38 NTA1P40354 457 aa0.98□□□□□ -2.25
snR38snR38 RSM24Q03976 319 aa0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms