RNA–Protein interactions for RNA: YNL009W

IDP3, Transcript of Peroxisomal NADP-dependent isocitrate dehydrogenase, yeastyeast

Gene IDP3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IDP3YNL009W SFP1P32432 683 aa8.73□□□□□ -1.01
IDP3YNL009W MRP8P35719 219 aa8.73□□□□□ -1.01
IDP3YNL009W ERP6P53198 216 aa8.73□□□□□ -1.01
IDP3YNL009W CTR9P89105 1077 aa8.73□□□□□ -1.01
IDP3YNL009W RPC31P17890 251 aa8.72□□□□□ -1.01
IDP3YNL009W RPL8BP29453 256 aaKnown RBP8.72□□□□□ -1.01
IDP3YNL009W RGA2Q06407 1009 aa8.72□□□□□ -1.01
IDP3YNL009W COBP00163 385 aa8.71□□□□□ -1.02
IDP3YNL009W CAN1P04817 590 aa8.71□□□□□ -1.02
IDP3YNL009W AGP1P25376 633 aa8.71□□□□□ -1.02
IDP3YNL009W ARE1P25628 610 aa8.71□□□□□ -1.02
IDP3YNL009W UGA3P26370 528 aa8.71□□□□□ -1.02
IDP3YNL009W STE5P32917 917 aa8.71□□□□□ -1.02
IDP3YNL009W SSN3P39073 555 aa8.71□□□□□ -1.02
IDP3YNL009W IRR1P40541 1150 aa8.71□□□□□ -1.02
IDP3YNL009W HUL4P40985 892 aa8.71□□□□□ -1.02
IDP3YNL009W MSN5P52918 1224 aa8.71□□□□□ -1.02
IDP3YNL009W LCB5Q06147 687 aaKnown RBP8.71□□□□□ -1.02
IDP3YNL009W EMG1Q06287 252 aaKnown RBP8.71□□□□□ -1.02
IDP3YNL009W ADR1P07248 1323 aa8.71□□□□□ -1.02
IDP3YNL009W SPA2P23201 1466 aaKnown RBP8.7□□□□□ -1.02
IDP3YNL009W TAF13P11747 167 aa8.7□□□□□ -1.02
IDP3YNL009W PYC2P32327 1180 aaKnown RBP8.7□□□□□ -1.02
IDP3YNL009W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
IDP3YNL009W SHE9Q04172 456 aa8.7□□□□□ -1.02
IDP3YNL009W EAF1Q06337 982 aa8.7□□□□□ -1.02
IDP3YNL009W FMP25Q08023 583 aa8.7□□□□□ -1.02
IDP3YNL009W SBA1P28707 216 aaKnown RBP8.69□□□□□ -1.02
IDP3YNL009W PEX28P38848 579 aa8.69□□□□□ -1.02
IDP3YNL009W TRP2P00899 507 aaKnown RBP8.68□□□□□ -1.02
IDP3YNL009W RPS31P05759 152 aaKnown RBP8.68□□□□□ -1.02
IDP3YNL009W IRE1P32361 1115 aa8.68□□□□□ -1.02
IDP3YNL009W ABD1P32783 436 aaPredicted RBP8.68□□□□□ -1.02
IDP3YNL009W SHM1P37292 490 aaPredicted RBP8.68□□□□□ -1.02
IDP3YNL009W PEX13P80667 386 aa8.68□□□□□ -1.02
IDP3YNL009W BUD21Q08492 214 aaPredicted RBP8.68□□□□□ -1.02
IDP3YNL009W SBP1P10080 294 aaKnown RBP8.67□□□□□ -1.02
IDP3YNL009W MRC1P25588 1096 aa8.67□□□□□ -1.02
IDP3YNL009W LYP1P32487 611 aa8.67□□□□□ -1.02
IDP3YNL009W NAB2P32505 525 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
IDP3YNL009W VBA5P36172 582 aa8.67□□□□□ -1.02
IDP3YNL009W NTG2Q08214 380 aa8.67□□□□□ -1.02
IDP3YNL009W SEC23P15303 768 aaKnown RBP8.66□□□□□ -1.02
IDP3YNL009W MSH2P25847 964 aa8.66□□□□□ -1.02
IDP3YNL009W DUR3P33413 735 aa8.66□□□□□ -1.02
IDP3YNL009W PBY1P38254 753 aa8.66□□□□□ -1.02
IDP3YNL009W SHU2P38957 223 aa8.66□□□□□ -1.02
IDP3YNL009W GNP1P48813 663 aa8.66□□□□□ -1.02
IDP3YNL009W YNR029CP53729 429 aaKnown RBP8.66□□□□□ -1.02
IDP3YNL009W HDA2Q06629 674 aa8.66□□□□□ -1.02
IDP3YNL009W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
IDP3YNL009W NAB3P38996 802 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
IDP3YNL009W YIL165CP40446 119 aa8.65□□□□□ -1.02
IDP3YNL009W SAP155P43612 1002 aa8.65□□□□□ -1.02
IDP3YNL009W PTK2P47116 818 aaKnown RBP8.65□□□□□ -1.02
IDP3YNL009W YGL140CP53120 1219 aa8.65□□□□□ -1.02
IDP3YNL009W CUS1Q02554 436 aaPredicted RBP8.65□□□□□ -1.02
IDP3YNL009W SRF1Q12516 437 aa8.65□□□□□ -1.02
IDP3YNL009W ARG82P07250 355 aa8.64□□□□□ -1.03
IDP3YNL009W PRP9P19736 530 aaKnown RBP8.64□□□□□ -1.03
IDP3YNL009W SEA4P38164 1038 aa8.64□□□□□ -1.03
IDP3YNL009W GEM1P39722 662 aa8.64□□□□□ -1.03
IDP3YNL009W ZDS1P50111 915 aaKnown RBP8.64□□□□□ -1.03
IDP3YNL009W YDL124WQ07551 312 aaKnown RBP8.64□□□□□ -1.03
IDP3YNL009W RPL8AP17076 256 aaKnown RBP8.63□□□□□ -1.03
IDP3YNL009W PDC6P26263 563 aaKnown RBP8.63□□□□□ -1.03
IDP3YNL009W RER2P35196 286 aa8.63□□□□□ -1.03
IDP3YNL009W PMC1P38929 1173 aaPredicted RBP8.63□□□□□ -1.03
IDP3YNL009W HLJ1P48353 224 aa8.63□□□□□ -1.03
IDP3YNL009W SIW14P53965 281 aa8.63□□□□□ -1.03
IDP3YNL009W YLR225CQ05948 407 aaKnown RBP8.63□□□□□ -1.03
IDP3YNL009W ESC2Q06340 456 aa8.63□□□□□ -1.03
IDP3YNL009W SNF7P39929 240 aaKnown RBP8.62□□□□□ -1.03
IDP3YNL009W ALR2P43553 858 aa8.62□□□□□ -1.03
IDP3YNL009W PFD1P46988 109 aa8.62□□□□□ -1.03
IDP3YNL009W ENT3P47160 408 aa8.62□□□□□ -1.03
IDP3YNL009W FOL1P53848 824 aa8.62□□□□□ -1.03
IDP3YNL009W TAF8Q03750 510 aa8.62□□□□□ -1.03
IDP3YNL009W LEU1P07264 779 aaKnown RBP8.61□□□□□ -1.03
IDP3YNL009W MSH3P25336 1018 aa8.61□□□□□ -1.03
IDP3YNL009W SEC6P32844 805 aa8.61□□□□□ -1.03
IDP3YNL009W PAF1P38351 445 aa8.61□□□□□ -1.03
IDP3YNL009W AAD14P42884 376 aa8.61□□□□□ -1.03
IDP3YNL009W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
IDP3YNL009W ITC1P53125 1264 aa8.61□□□□□ -1.03
IDP3YNL009W UTP8P53276 713 aaKnown RBP8.61□□□□□ -1.03
IDP3YNL009W UGO1Q03327 502 aa8.61□□□□□ -1.03
IDP3YNL009W YLR346CQ06139 101 aa8.61□□□□□ -1.03
IDP3YNL009W PSH1Q12161 406 aa8.61□□□□□ -1.03
IDP3YNL009W APM2P38700 605 aa8.6□□□□□ -1.03
IDP3YNL009W HSV2P50079 448 aaPredicted RBP8.6□□□□□ -1.03
IDP3YNL009W NOG1Q02892 647 aaKnown RBP8.6□□□□□ -1.03
IDP3YNL009W TFB2Q02939 513 aa8.6□□□□□ -1.03
IDP3YNL009W CMR1Q12510 522 aaKnown RBP8.6□□□□□ -1.03
IDP3YNL009W INO1P11986 533 aa8.59□□□□□ -1.03
IDP3YNL009W RIM11P38615 370 aa8.59□□□□□ -1.03
IDP3YNL009W NUP85P46673 744 aa8.59□□□□□ -1.03
IDP3YNL009W SKP1P52286 194 aa8.59□□□□□ -1.03
IDP3YNL009W RTA1P53047 317 aa8.59□□□□□ -1.03
IDP3YNL009W NPR1P22211 790 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms