RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C GNT1Q12096 491 aa1.18□□□□□ -2.22
RKR1YMR247C CHS2P14180 963 aa1.18□□□□□ -2.22
RKR1YMR247C PUF4P25339 888 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
RKR1YMR247C ILV6P25605 309 aaKnown RBP1.18□□□□□ -2.22
RKR1YMR247C CDC11P32458 415 aa1.18□□□□□ -2.22
RKR1YMR247C BOI1P38041 980 aaKnown RBP1.18□□□□□ -2.22
RKR1YMR247C BAP2P38084 609 aa1.18□□□□□ -2.22
RKR1YMR247C ALG14P38242 237 aa1.18□□□□□ -2.22
RKR1YMR247C HAL5P38970 855 aaKnown RBP1.18□□□□□ -2.22
RKR1YMR247C ALD2P47771 506 aa1.18□□□□□ -2.22
RKR1YMR247C MTO1P53070 669 aa1.18□□□□□ -2.22
RKR1YMR247C YPL109CQ02981 657 aa1.18□□□□□ -2.22
RKR1YMR247C AVO1Q08236 1176 aa1.18□□□□□ -2.22
RKR1YMR247C YOR352WQ08816 343 aa1.18□□□□□ -2.22
RKR1YMR247C Q0182Q9ZZW1 134 aa1.18□□□□□ -2.22
RKR1YMR247C HTS1P07263 546 aaKnown RBP1.17□□□□□ -2.22
RKR1YMR247C MSN1P22148 382 aa1.17□□□□□ -2.22
RKR1YMR247C MCM5P29496 775 aaKnown RBP1.17□□□□□ -2.22
RKR1YMR247C ISC10P32645 267 aa1.17□□□□□ -2.22
RKR1YMR247C POL5P39985 1022 aaKnown RBP1.17□□□□□ -2.22
RKR1YMR247C IRC24P40580 263 aa1.17□□□□□ -2.22
RKR1YMR247C MMM1P41800 426 aa1.17□□□□□ -2.22
RKR1YMR247C SEC26P41810 973 aaKnown RBP1.17□□□□□ -2.22
RKR1YMR247C ITC1P53125 1264 aa1.17□□□□□ -2.22
RKR1YMR247C YAF9P53930 226 aa1.17□□□□□ -2.22
RKR1YMR247C SIZ1Q04195 904 aa1.17□□□□□ -2.22
RKR1YMR247C ENB1Q08299 606 aa1.17□□□□□ -2.22
RKR1YMR247C GLO4Q12320 285 aa1.17□□□□□ -2.22
RKR1YMR247C TRL1P09880 827 aaKnown RBP1.17□□□□□ -2.22
RKR1YMR247C IDI1P15496 288 aa1.17□□□□□ -2.22
RKR1YMR247C MSC7P38694 644 aa1.17□□□□□ -2.22
RKR1YMR247C ECM1P39715 212 aa1.17□□□□□ -2.22
RKR1YMR247C GIP2P40036 548 aa1.17□□□□□ -2.22
RKR1YMR247C RGD2P43556 714 aa1.17□□□□□ -2.22
RKR1YMR247C APP1P53933 587 aa1.17□□□□□ -2.22
RKR1YMR247C DOS2P54858 310 aa1.17□□□□□ -2.22
RKR1YMR247C VPS30Q02948 557 aa1.17□□□□□ -2.22
RKR1YMR247C SPO20Q04359 397 aa1.17□□□□□ -2.22
RKR1YMR247C GIC2Q06648 383 aa1.17□□□□□ -2.22
RKR1YMR247C YDL176WQ12027 708 aa1.17□□□□□ -2.22
RKR1YMR247C CCP1P00431 361 aa1.17□□□□□ -2.22
RKR1YMR247C DBP5P20449 482 aaKnown RBP1.17□□□□□ -2.22
RKR1YMR247C CPS1P27614 576 aa1.17□□□□□ -2.22
RKR1YMR247C GLO3P38682 493 aaKnown RBP1.17□□□□□ -2.22
RKR1YMR247C BOI2P39969 1040 aa1.17□□□□□ -2.22
RKR1YMR247C CHZ1P40019 153 aaPredicted RBP1.17□□□□□ -2.22
RKR1YMR247C YNR014WP53719 212 aa1.17□□□□□ -2.22
RKR1YMR247C ITT1Q04638 464 aa1.17□□□□□ -2.22
RKR1YMR247C HPF1Q05164 967 aa1.17□□□□□ -2.22
RKR1YMR247C ATG11Q12527 1178 aa1.17□□□□□ -2.22
RKR1YMR247C YLR358CO13565 187 aa1.16□□□□□ -2.22
RKR1YMR247C SOD2P00447 233 aa1.16□□□□□ -2.22
RKR1YMR247C YAR028WP39548 234 aa1.16□□□□□ -2.22
RKR1YMR247C CCM1P48237 864 aaPredicted RBP1.16□□□□□ -2.22
RKR1YMR247C PSP2P50109 593 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C ALT1P52893 592 aa1.16□□□□□ -2.22
RKR1YMR247C SEN54Q02825 467 aaPredicted RBP1.16□□□□□ -2.22
RKR1YMR247C POB3Q04636 552 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C ACM1Q08981 209 aa1.16□□□□□ -2.22
RKR1YMR247C PHO4P07270 312 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C NPR1P22211 790 aa1.16□□□□□ -2.22
RKR1YMR247C ADP1P25371 1049 aa1.16□□□□□ -2.22
RKR1YMR247C AGP1P25376 633 aa1.16□□□□□ -2.22
RKR1YMR247C PYC2P32327 1180 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C SUV3P32580 737 aa1.16□□□□□ -2.22
RKR1YMR247C LSB6P42951 607 aa1.16□□□□□ -2.22
RKR1YMR247C CNN1P43618 361 aa1.16□□□□□ -2.22
RKR1YMR247C YJR124CP47159 448 aa1.16□□□□□ -2.22
RKR1YMR247C RIM8P53179 542 aa1.16□□□□□ -2.22
RKR1YMR247C CAF120P53836 1060 aa1.16□□□□□ -2.22
RKR1YMR247C ALD3P54114 506 aa1.16□□□□□ -2.22
RKR1YMR247C HOS3Q02959 697 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C YPL034WQ03083 165 aa1.16□□□□□ -2.22
RKR1YMR247C FUN30P31380 1131 aa1.16□□□□□ -2.22
RKR1YMR247C PBY1P38254 753 aa1.16□□□□□ -2.22
RKR1YMR247C SIT1P39980 628 aa1.16□□□□□ -2.22
RKR1YMR247C UTP7P40055 554 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C DAS1P47005 663 aa1.16□□□□□ -2.22
RKR1YMR247C BUD9P53226 547 aa1.16□□□□□ -2.22
RKR1YMR247C NSG2P53898 299 aa1.16□□□□□ -2.22
RKR1YMR247C SPO75Q07798 868 aa1.16□□□□□ -2.22
RKR1YMR247C PIN2Q12057 282 aa1.16□□□□□ -2.22
RKR1YMR247C TIF6Q12522 245 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C YBL113CQ7M4S9 792 aa1.16□□□□□ -2.22
RKR1YMR247C PRP40P33203 583 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C SHM1P37292 490 aaPredicted RBP1.16□□□□□ -2.22
RKR1YMR247C YHL008CP38750 627 aa1.16□□□□□ -2.22
RKR1YMR247C FPR3P38911 411 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C NEO1P40527 1151 aa1.16□□□□□ -2.22
RKR1YMR247C ENP2P48234 707 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C PPT1P53043 513 aa1.16□□□□□ -2.22
RKR1YMR247C NCE103P53615 221 aa1.16□□□□□ -2.22
RKR1YMR247C VPS16Q03308 798 aa1.16□□□□□ -2.22
RKR1YMR247C HAS1Q03532 505 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C NUT2Q06213 157 aa1.16□□□□□ -2.22
RKR1YMR247C EMG1Q06287 252 aaKnown RBP1.16□□□□□ -2.22
RKR1YMR247C PET112P33893 541 aa1.15□□□□□ -2.22
RKR1YMR247C PGM2P37012 569 aaKnown RBP1.15□□□□□ -2.22
RKR1YMR247C RDH54P38086 958 aa1.15□□□□□ -2.22
RKR1YMR247C REI1P38344 393 aaPredicted RBP1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms