RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C CUZ1P53899 274 aa5.99□□□□□ -1.45
EAR1YMR171C SPR28Q04921 423 aa5.99□□□□□ -1.45
EAR1YMR171C OXR1Q08952 273 aa5.99□□□□□ -1.45
EAR1YMR171C FLP1P03870 423 aa5.98□□□□□ -1.45
EAR1YMR171C RPP1AP05318 106 aaPredicted RBP5.98□□□□□ -1.45
EAR1YMR171C YMR265CQ03508 461 aaKnown RBP5.98□□□□□ -1.45
EAR1YMR171C MMS1Q06211 1407 aa5.98□□□□□ -1.45
EAR1YMR171C COBP00163 385 aa5.98□□□□□ -1.45
EAR1YMR171C CCP1P00431 361 aa5.98□□□□□ -1.45
EAR1YMR171C PYC2P32327 1180 aaKnown RBP5.97□□□□□ -1.45
EAR1YMR171C MSC7P38694 644 aa5.97□□□□□ -1.45
EAR1YMR171C RPS26AP39938 119 aaKnown RBP5.97□□□□□ -1.45
EAR1YMR171C RPS26BP39939 119 aaKnown RBP5.97□□□□□ -1.45
EAR1YMR171C YER156CP40093 338 aaKnown RBP5.97□□□□□ -1.45
EAR1YMR171C SVF1Q05515 481 aa5.97□□□□□ -1.45
EAR1YMR171C SPT7P35177 1332 aa5.96□□□□□ -1.45
EAR1YMR171C IDI1P15496 288 aa5.96□□□□□ -1.46
EAR1YMR171C FAA3P39002 694 aa5.96□□□□□ -1.46
EAR1YMR171C ACO2P39533 789 aa5.96□□□□□ -1.46
EAR1YMR171C YIR007WP40566 764 aa5.96□□□□□ -1.46
EAR1YMR171C YGR122WP53272 402 aa5.96□□□□□ -1.46
EAR1YMR171C KRE33P53914 1056 aaKnown RBP5.96□□□□□ -1.46
EAR1YMR171C DAL4Q04895 635 aa5.96□□□□□ -1.46
EAR1YMR171C YCS4Q06156 1176 aa5.96□□□□□ -1.46
EAR1YMR171C GDB1Q06625 1536 aa5.96□□□□□ -1.46
EAR1YMR171C DUR3P33413 735 aa5.95□□□□□ -1.46
EAR1YMR171C PPT1P53043 513 aa5.95□□□□□ -1.46
EAR1YMR171C HEH2Q03281 663 aa5.95□□□□□ -1.46
EAR1YMR171C HXK1P04806 485 aaKnown RBP5.94□□□□□ -1.46
EAR1YMR171C FPS1P23900 669 aa5.94□□□□□ -1.46
EAR1YMR171C ECM2P38241 364 aaKnown RBP5.94□□□□□ -1.46
EAR1YMR171C PDR5P33302 1511 aaKnown RBP5.94□□□□□ -1.46
EAR1YMR171C CYC8P14922 966 aa5.94□□□□□ -1.46
EAR1YMR171C PRP40P33203 583 aaKnown RBP5.94□□□□□ -1.46
EAR1YMR171C CAF120P53836 1060 aa5.94□□□□□ -1.46
EAR1YMR171C ADE12P80210 433 aaKnown RBP5.94□□□□□ -1.46
EAR1YMR171C YDR461C-AQ2V2P7 80 aa5.94□□□□□ -1.46
EAR1YMR171C PDR12Q02785 1511 aa5.93□□□□□ -1.46
EAR1YMR171C NUT1P53114 1132 aa5.93□□□□□ -1.46
EAR1YMR171C MON1P53129 644 aa5.93□□□□□ -1.46
EAR1YMR171C MSH6Q03834 1242 aa5.93□□□□□ -1.46
EAR1YMR171C JIP5Q06214 492 aaPredicted RBP5.93□□□□□ -1.46
EAR1YMR171C RSC2Q06488 889 aa5.93□□□□□ -1.46
EAR1YMR171C SPO14P36126 1683 aa5.93□□□□□ -1.46
EAR1YMR171C PEP7P32609 515 aa5.92□□□□□ -1.46
EAR1YMR171C UGA4P32837 571 aa5.92□□□□□ -1.46
EAR1YMR171C IQG1Q12280 1495 aa5.92□□□□□ -1.46
EAR1YMR171C RAD2P07276 1031 aa5.91□□□□□ -1.46
EAR1YMR171C CEM1P39525 442 aa5.91□□□□□ -1.46
EAR1YMR171C PRK1P40494 810 aa5.91□□□□□ -1.46
EAR1YMR171C YJL181WP46987 611 aa5.91□□□□□ -1.46
EAR1YMR171C RMD1Q03441 430 aa5.91□□□□□ -1.46
EAR1YMR171C TY1A-DR2Q03964 440 aaKnown RBP5.91□□□□□ -1.46
EAR1YMR171C ESF1Q06344 628 aaKnown RBP5.91□□□□□ -1.46
EAR1YMR171C SYT1Q06836 1226 aa5.91□□□□□ -1.46
EAR1YMR171C DRS2P39524 1355 aa5.91□□□□□ -1.46
EAR1YMR171C FUS1P11710 512 aa5.91□□□□□ -1.46
EAR1YMR171C LYS5P50113 272 aa5.91□□□□□ -1.46
EAR1YMR171C BUD21Q08492 214 aaPredicted RBP5.91□□□□□ -1.46
EAR1YMR171C MHP1P43638 1398 aa5.9□□□□□ -1.46
EAR1YMR171C MRP10O75012 95 aa5.9□□□□□ -1.47
EAR1YMR171C KAR2P16474 682 aaKnown RBP5.9□□□□□ -1.47
EAR1YMR171C MCM5P29496 775 aaKnown RBP5.9□□□□□ -1.47
EAR1YMR171C PAF1P38351 445 aa5.9□□□□□ -1.47
EAR1YMR171C RIM11P38615 370 aa5.9□□□□□ -1.47
EAR1YMR171C ALD3P54114 506 aa5.9□□□□□ -1.47
EAR1YMR171C ULP1Q02724 621 aa5.9□□□□□ -1.47
EAR1YMR171C BUD3P25558 1636 aa5.89□□□□□ -1.47
EAR1YMR171C YOR093CQ12275 1648 aa5.89□□□□□ -1.47
EAR1YMR171C GAR1P28007 205 aaKnown RBP5.89□□□□□ -1.47
EAR1YMR171C RVS167P39743 482 aaKnown RBP5.89□□□□□ -1.47
EAR1YMR171C INP51P40559 946 aaKnown RBP5.89□□□□□ -1.47
EAR1YMR171C SAP155P43612 1002 aa5.89□□□□□ -1.47
EAR1YMR171C YPL109CQ02981 657 aa5.89□□□□□ -1.47
EAR1YMR171C CMR1Q12510 522 aaKnown RBP5.89□□□□□ -1.47
EAR1YMR171C NUP157P40064 1391 aaKnown RBP5.89□□□□□ -1.47
EAR1YMR171C PRE9P23638 258 aaKnown RBP5.88□□□□□ -1.47
EAR1YMR171C MRPS18P42847 217 aa5.88□□□□□ -1.47
EAR1YMR171C MAG2Q06436 670 aaKnown RBP5.88□□□□□ -1.47
EAR1YMR171C PMT7Q06644 662 aa5.88□□□□□ -1.47
EAR1YMR171C YDL176WQ12027 708 aa5.88□□□□□ -1.47
EAR1YMR171C MCD1Q12158 566 aa5.88□□□□□ -1.47
EAR1YMR171C GLO4Q12320 285 aa5.88□□□□□ -1.47
EAR1YMR171C YRF1-1P0CX20 1796 aa5.88□□□□□ -1.47
EAR1YMR171C YRF1-5P0CX21 1796 aa5.88□□□□□ -1.47
EAR1YMR171C YRF1-8P0CX22 1796 aa5.88□□□□□ -1.47
EAR1YMR171C NPR1P22211 790 aa5.88□□□□□ -1.47
EAR1YMR171C NAP1P25293 417 aaKnown RBP5.88□□□□□ -1.47
EAR1YMR171C TFA2P36145 328 aa5.88□□□□□ -1.47
EAR1YMR171C BIO5P53744 561 aaKnown RBP5.88□□□□□ -1.47
EAR1YMR171C CHC1P22137 1653 aaKnown RBP5.87□□□□□ -1.47
EAR1YMR171C YAF9P53930 226 aa5.87□□□□□ -1.47
EAR1YMR171C ADI1Q03677 179 aa5.87□□□□□ -1.47
EAR1YMR171C HVG1P0CE11 249 aa5.86□□□□□ -1.47
EAR1YMR171C AMN1P38285 549 aaPredicted RBP5.86□□□□□ -1.47
EAR1YMR171C YJR124CP47159 448 aa5.86□□□□□ -1.47
EAR1YMR171C PRP5P21372 849 aaPredicted RBP5.85□□□□□ -1.47
EAR1YMR171C PET112P33893 541 aa5.85□□□□□ -1.47
EAR1YMR171C PIC2P40035 300 aa5.85□□□□□ -1.47
EAR1YMR171C VPS16Q03308 798 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms