RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C HTS1P07263 546 aaKnown RBP7.38□□□□□ -1.23
CTF18YMR078C SEC23P15303 768 aaKnown RBP7.38□□□□□ -1.23
CTF18YMR078C SQT1P35184 431 aa7.38□□□□□ -1.23
CTF18YMR078C SSF2Q12153 453 aaPredicted RBP7.38□□□□□ -1.23
CTF18YMR078C KNS1P32350 737 aaPredicted RBP7.37□□□□□ -1.23
CTF18YMR078C RDH54P38086 958 aa7.37□□□□□ -1.23
CTF18YMR078C FET4P40988 552 aa7.37□□□□□ -1.23
CTF18YMR078C JJJ3P47138 172 aa7.37□□□□□ -1.23
CTF18YMR078C NAR1P23503 491 aaKnown RBP7.37□□□□□ -1.23
CTF18YMR078C GUP1P53154 560 aa7.36□□□□□ -1.23
CTF18YMR078C YGR053CP53234 283 aa7.36□□□□□ -1.23
CTF18YMR078C SOK2P53438 785 aaPredicted RBP7.36□□□□□ -1.23
CTF18YMR078C HDA2Q06629 674 aa7.36□□□□□ -1.23
CTF18YMR078C REC8Q12188 680 aa7.36□□□□□ -1.23
CTF18YMR078C HXT13P39924 564 aa7.36□□□□□ -1.23
CTF18YMR078C HXT17P53631 564 aa7.36□□□□□ -1.23
CTF18YMR078C HXT15P54854 567 aa7.36□□□□□ -1.23
CTF18YMR078C GIS4Q04233 774 aa7.36□□□□□ -1.23
CTF18YMR078C NNF1P47149 201 aa7.35□□□□□ -1.23
CTF18YMR078C GDE1Q02979 1223 aa7.35□□□□□ -1.23
CTF18YMR078C HPF1Q05164 967 aa7.35□□□□□ -1.23
CTF18YMR078C RTT10Q08924 1013 aa7.35□□□□□ -1.23
CTF18YMR078C YTA7P40340 1379 aa7.35□□□□□ -1.23
CTF18YMR078C EEB1Q02891 456 aa7.35□□□□□ -1.23
CTF18YMR078C MRL1Q06815 381 aa7.35□□□□□ -1.23
CTF18YMR078C NEO1P40527 1151 aa7.34□□□□□ -1.23
CTF18YMR078C YIG1Q08956 461 aa7.34□□□□□ -1.23
CTF18YMR078C GIP2P40036 548 aa7.33□□□□□ -1.24
CTF18YMR078C CWC24P53769 259 aa7.33□□□□□ -1.24
CTF18YMR078C PGM2P37012 569 aaKnown RBP7.32□□□□□ -1.24
CTF18YMR078C TAT2P38967 592 aa7.32□□□□□ -1.24
CTF18YMR078C NEM1P38757 446 aa7.32□□□□□ -1.24
CTF18YMR078C PAN5P38787 379 aa7.32□□□□□ -1.24
CTF18YMR078C TED1P40533 473 aa7.32□□□□□ -1.24
CTF18YMR078C SHU2P38957 223 aa7.31□□□□□ -1.24
CTF18YMR078C VMA4P22203 233 aaKnown RBP7.31□□□□□ -1.24
CTF18YMR078C YKL069WP36088 180 aa7.31□□□□□ -1.24
CTF18YMR078C POL5P39985 1022 aaKnown RBP7.31□□□□□ -1.24
CTF18YMR078C LEM3P42838 414 aa7.31□□□□□ -1.24
CTF18YMR078C SLS1P42900 643 aa7.31□□□□□ -1.24
CTF18YMR078C UTP22P53254 1237 aaPredicted RBP7.31□□□□□ -1.24
CTF18YMR078C SIW14P53965 281 aa7.3□□□□□ -1.24
CTF18YMR078C TAF13P11747 167 aa7.29□□□□□ -1.24
CTF18YMR078C YKL077WP36081 392 aa7.29□□□□□ -1.24
CTF18YMR078C IOC3P43596 787 aa7.29□□□□□ -1.24
CTF18YMR078C SLP1Q12232 587 aa7.29□□□□□ -1.24
CTF18YMR078C PRI2P20457 528 aa7.29□□□□□ -1.24
CTF18YMR078C ALG14P38242 237 aa7.29□□□□□ -1.24
CTF18YMR078C UTP5Q04177 643 aaKnown RBP7.29□□□□□ -1.24
CTF18YMR078C DPH6Q12429 685 aa7.29□□□□□ -1.24
CTF18YMR078C YOL098CQ12496 1037 aa7.29□□□□□ -1.24
CTF18YMR078C ROD1Q02805 837 aa7.28□□□□□ -1.24
CTF18YMR078C SPO71Q03868 1245 aa7.28□□□□□ -1.24
CTF18YMR078C OPI10Q08202 246 aa7.28□□□□□ -1.24
CTF18YMR078C WRS1Q12109 432 aaKnown RBP7.28□□□□□ -1.24
CTF18YMR078C RER2P35196 286 aa7.28□□□□□ -1.24
CTF18YMR078C TY4B-PA0A0B7P3V8 1104 aa7.27□□□□□ -1.25
CTF18YMR078C TMA46Q12000 345 aaKnown RBP7.27□□□□□ -1.25
CTF18YMR078C TY4A-HQ6Q5P6 413 aa7.27□□□□□ -1.25
CTF18YMR078C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
CTF18YMR078C ERS1P17261 260 aa7.26□□□□□ -1.25
CTF18YMR078C MEC3Q02574 474 aa7.26□□□□□ -1.25
CTF18YMR078C TRP2P00899 507 aaKnown RBP7.25□□□□□ -1.25
CTF18YMR078C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25 RIP-Chip
CTF18YMR078C GRX1P25373 110 aaKnown RBP7.25□□□□□ -1.25
CTF18YMR078C MKK2P32491 506 aa7.25□□□□□ -1.25
CTF18YMR078C GCV1P48015 400 aa7.25□□□□□ -1.25
CTF18YMR078C ESC2Q06340 456 aa7.25□□□□□ -1.25
CTF18YMR078C NHA1Q99271 985 aa7.25□□□□□ -1.25
CTF18YMR078C SPF1P39986 1215 aaKnown RBP7.24□□□□□ -1.25
CTF18YMR078C ENT3P47160 408 aa7.24□□□□□ -1.25
CTF18YMR078C YGR035CP53222 116 aa7.24□□□□□ -1.25
CTF18YMR078C AFG2P32794 780 aa7.24□□□□□ -1.25
CTF18YMR078C EST2Q06163 884 aa7.24□□□□□ -1.25
CTF18YMR078C ELG1Q12050 791 aa7.24□□□□□ -1.25
CTF18YMR078C DED1P06634 604 aaKnown RBP7.23□□□□□ -1.25
CTF18YMR078C ARL1P38116 183 aaKnown RBP7.23□□□□□ -1.25
CTF18YMR078C SEA4P38164 1038 aa7.23□□□□□ -1.25
CTF18YMR078C TYW3P53177 273 aa7.23□□□□□ -1.25
CTF18YMR078C RAT1Q02792 1006 aaKnown RBP7.23□□□□□ -1.25
CTF18YMR078C FAL1Q12099 399 aaKnown RBP7.23□□□□□ -1.25
CTF18YMR078C BAS1P22035 811 aa7.23□□□□□ -1.25
CTF18YMR078C RAD27P26793 382 aa7.23□□□□□ -1.25
CTF18YMR078C ADD66P36040 267 aa7.23□□□□□ -1.25
CTF18YMR078C SPO74P45819 413 aa7.23□□□□□ -1.25
CTF18YMR078C GBP2P25555 427 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
CTF18YMR078C MTR4P47047 1073 aaKnown RBP7.22□□□□□ -1.25
CTF18YMR078C YJL049WP47048 450 aa7.22□□□□□ -1.25
CTF18YMR078C NSE3Q05541 303 aa7.22□□□□□ -1.25
CTF18YMR078C SAC7P17121 654 aa7.21□□□□□ -1.25
CTF18YMR078C REI1P38344 393 aaPredicted RBP7.21□□□□□ -1.25
CTF18YMR078C ALG6Q12001 544 aaKnown RBP7.21□□□□□ -1.25
CTF18YMR078C AIM44Q99299 758 aa7.21□□□□□ -1.25
CTF18YMR078C LYP1P32487 611 aa7.21□□□□□ -1.26
CTF18YMR078C SBE2P42223 864 aaKnown RBP7.21□□□□□ -1.26
CTF18YMR078C TDA5Q06417 326 aaKnown RBP7.21□□□□□ -1.26
CTF18YMR078C STE5P32917 917 aa7.2□□□□□ -1.26
CTF18YMR078C TIF35Q04067 274 aaKnown RBP7.2□□□□□ -1.26
CTF18YMR078C BDF2Q07442 638 aa7.2□□□□□ -1.26
CTF18YMR078C ABD1P32783 436 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms