RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W PRO1P32264 428 aa3.52□□□□□ -1.85
MVP1YMR004W PNP1Q05788 311 aa3.52□□□□□ -1.85
MVP1YMR004W HTS1P07263 546 aaKnown RBP3.51□□□□□ -1.85
MVP1YMR004W RIM8P53179 542 aa3.51□□□□□ -1.85
MVP1YMR004W MRPL22P53881 309 aa3.51□□□□□ -1.85
MVP1YMR004W CTR9P89105 1077 aa3.51□□□□□ -1.85
MVP1YMR004W MEC3Q02574 474 aa3.51□□□□□ -1.85
MVP1YMR004W GSF2Q04697 403 aaKnown RBP3.51□□□□□ -1.85
MVP1YMR004W LSO1Q3E827 93 aa3.51□□□□□ -1.85
MVP1YMR004W YDL177CQ12257 170 aa3.5□□□□□ -1.85
MVP1YMR004W SSA4P22202 642 aaKnown RBP3.49□□□□□ -1.85
MVP1YMR004W RIM11P38615 370 aa3.49□□□□□ -1.85
MVP1YMR004W COBP00163 385 aa3.49□□□□□ -1.85
MVP1YMR004W NPR1P22211 790 aa3.49□□□□□ -1.85
MVP1YMR004W REI1P38344 393 aaPredicted RBP3.49□□□□□ -1.85
MVP1YMR004W PTC7P38797 343 aa3.49□□□□□ -1.85
MVP1YMR004W ALG6Q12001 544 aaKnown RBP3.49□□□□□ -1.85
MVP1YMR004W CMR1Q12510 522 aaKnown RBP3.49□□□□□ -1.85
MVP1YMR004W SOD2P00447 233 aa3.48□□□□□ -1.85
MVP1YMR004W PRP5P21372 849 aaPredicted RBP3.48□□□□□ -1.85
MVP1YMR004W NFS1P25374 497 aa3.48□□□□□ -1.85
MVP1YMR004W SMY2P32909 740 aaKnown RBP3.48□□□□□ -1.85
MVP1YMR004W UTP22P53254 1237 aaPredicted RBP3.48□□□□□ -1.85
MVP1YMR004W YML083CQ04526 418 aa3.48□□□□□ -1.85
MVP1YMR004W TOD6P34219 525 aa3.47□□□□□ -1.85
MVP1YMR004W GTS1P40956 396 aa3.47□□□□□ -1.85
MVP1YMR004W TAD3Q9URQ3 322 aa3.47□□□□□ -1.85
MVP1YMR004W ABZ1P37254 787 aaPredicted RBP3.46□□□□□ -1.86
MVP1YMR004W DUR3P33413 735 aa3.45□□□□□ -1.86
MVP1YMR004W NNK1P36003 928 aa3.45□□□□□ -1.86
MVP1YMR004W YGR045CP53229 120 aa3.45□□□□□ -1.86
MVP1YMR004W ELA1P53861 379 aaPredicted RBP3.45□□□□□ -1.86
MVP1YMR004W YPL277CQ08989 487 aa3.45□□□□□ -1.86
MVP1YMR004W FUR4P05316 633 aaKnown RBP3.44□□□□□ -1.86
MVP1YMR004W ECM2P38241 364 aaKnown RBP3.44□□□□□ -1.86
MVP1YMR004W ETP1P38748 585 aaKnown RBP3.44□□□□□ -1.86
MVP1YMR004W RPS13P05756 151 aaKnown RBP3.44□□□□□ -1.86
MVP1YMR004W BOL3P39724 118 aa3.44□□□□□ -1.86
MVP1YMR004W CLU1Q03690 1277 aaKnown RBP3.44□□□□□ -1.86
MVP1YMR004W NOB1Q08444 459 aaKnown RBP3.44□□□□□ -1.86
MVP1YMR004W ARL1P38116 183 aaKnown RBP3.43□□□□□ -1.86
MVP1YMR004W RSC4Q02206 625 aa3.43□□□□□ -1.86
MVP1YMR004W AVO1Q08236 1176 aa3.43□□□□□ -1.86
MVP1YMR004W PUS7Q08647 676 aaKnown RBP3.43□□□□□ -1.86
MVP1YMR004W YLR358CO13565 187 aa3.42□□□□□ -1.86
MVP1YMR004W TUB2P02557 457 aaKnown RBP3.42□□□□□ -1.86
MVP1YMR004W SHM2P37291 469 aaKnown RBP3.42□□□□□ -1.86
MVP1YMR004W SNO2P53823 222 aa3.42□□□□□ -1.86
MVP1YMR004W CTS1P29029 562 aa3.41□□□□□ -1.86
MVP1YMR004W SAP155P43612 1002 aa3.41□□□□□ -1.86
MVP1YMR004W TPP1Q03796 238 aa3.41□□□□□ -1.86
MVP1YMR004W PNS1Q12412 539 aa3.41□□□□□ -1.86
MVP1YMR004W TY1A-LR4P0C2I8 440 aaKnown RBP3.4□□□□□ -1.86
MVP1YMR004W TY1A-DR6P0CX70 440 aa3.4□□□□□ -1.86
MVP1YMR004W TY1A-ER1P0CX71 440 aa3.4□□□□□ -1.86
MVP1YMR004W TY1A-LR2P0CX72 440 aa3.4□□□□□ -1.86
MVP1YMR004W TY1A-PLP0CX73 440 aa3.4□□□□□ -1.86
MVP1YMR004W TY1A-JR1P0CX74 440 aa3.4□□□□□ -1.86
MVP1YMR004W TY1A-LR3P0CX75 440 aa3.4□□□□□ -1.86
MVP1YMR004W TY1A-ML2P0CX76 440 aa3.4□□□□□ -1.86
MVP1YMR004W PRE10P21242 288 aaKnown RBP RIP-Chip data3.4□□□□□ -1.86not detected
MVP1YMR004W UFD2P54860 961 aa3.4□□□□□ -1.86
MVP1YMR004W TY1A-GR1Q12085 440 aa3.4□□□□□ -1.86
MVP1YMR004W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.4□□□□□ -1.86
MVP1YMR004W TY1A-OLQ92392 440 aaKnown RBP3.4□□□□□ -1.86
MVP1YMR004W FOL2P51601 243 aaKnown RBP3.39□□□□□ -1.87
MVP1YMR004W SAM35P14693 329 aa3.39□□□□□ -1.87
MVP1YMR004W YPT53P36019 220 aa3.39□□□□□ -1.87
MVP1YMR004W YHL012WP38709 493 aa3.39□□□□□ -1.87
MVP1YMR004W PMT7Q06644 662 aa3.39□□□□□ -1.87
MVP1YMR004W YAF9P53930 226 aa3.38□□□□□ -1.87
MVP1YMR004W FLP1P03870 423 aa3.37□□□□□ -1.87
MVP1YMR004W MDL2P33311 773 aa3.37□□□□□ -1.87
MVP1YMR004W NUT1P53114 1132 aa3.37□□□□□ -1.87
MVP1YMR004W YDR132CQ03900 495 aa3.36□□□□□ -1.87
MVP1YMR004W SUB2Q07478 446 aaKnown RBP3.36□□□□□ -1.87
MVP1YMR004W RET1P22276 1149 aaKnown RBP3.35□□□□□ -1.87
MVP1YMR004W MCM5P29496 775 aaKnown RBP3.35□□□□□ -1.87
MVP1YMR004W YKL077WP36081 392 aa3.35□□□□□ -1.87
MVP1YMR004W GLO3P38682 493 aaKnown RBP3.35□□□□□ -1.87
MVP1YMR004W TAT2P38967 592 aa3.35□□□□□ -1.87
MVP1YMR004W MPT5P39016 859 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
MVP1YMR004W YAR028WP39548 234 aa3.35□□□□□ -1.87
MVP1YMR004W SLS1P42900 643 aa3.35□□□□□ -1.87
MVP1YMR004W BSC2Q05611 235 aa3.35□□□□□ -1.87
MVP1YMR004W YLR257WQ06146 321 aaKnown RBP3.35□□□□□ -1.87
MVP1YMR004W RLF2Q12495 606 aa3.35□□□□□ -1.87
MVP1YMR004W AIM26P32858 118 aa3.34□□□□□ -1.87
MVP1YMR004W EXO5P38289 585 aa3.34□□□□□ -1.87
MVP1YMR004W NMD3P38861 518 aaKnown RBP3.34□□□□□ -1.87
MVP1YMR004W YNL011CP53980 444 aa3.34□□□□□ -1.87
MVP1YMR004W RPL34AP87262 121 aaPredicted RBP3.34□□□□□ -1.87
MVP1YMR004W SRO9P25567 434 aaKnown RBP3.34□□□□□ -1.88
MVP1YMR004W NEM1P38757 446 aa3.34□□□□□ -1.88
MVP1YMR004W QDR1P40475 563 aa3.34□□□□□ -1.88
MVP1YMR004W KAR5Q04746 504 aa3.34□□□□□ -1.88
MVP1YMR004W HRK1Q08732 759 aaKnown RBP3.34□□□□□ -1.88
MVP1YMR004W RVS167P39743 482 aaKnown RBP3.33□□□□□ -1.88
MVP1YMR004W SPT20P50875 604 aa3.33□□□□□ -1.88
MVP1YMR004W ENV11P53246 860 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms