RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeast

Gene RNP1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNP1	YLL046C	PRO1	P32264	428 aa		5.35	□□□□□ -1.55
RNP1	YLL046C	TOD6	P34219	525 aa		5.35	□□□□□ -1.55
RNP1	YLL046C	SMC1	P32908	1225 aa		5.34	□□□□□ -1.55
RNP1	YLL046C	LPX1	Q12405	387 aa	Known RBP	5.34	□□□□□ -1.55
RNP1	YLL046C	SOD2	P00447	233 aa		5.32	□□□□□ -1.56
RNP1	YLL046C	CTR9	P89105	1077 aa		5.31	□□□□□ -1.56
RNP1	YLL046C	LSO1	Q3E827	93 aa		5.31	□□□□□ -1.56
RNP1	YLL046C	GCV1	P48015	400 aa		5.3	□□□□□ -1.56
RNP1	YLL046C	EAR1	Q03212	550 aa		5.3	□□□□□ -1.56
RNP1	YLL046C	ALT1	P52893	592 aa		5.29	□□□□□ -1.56
RNP1	YLL046C	NOB1	Q08444	459 aa	Known RBP	5.29	□□□□□ -1.56
RNP1	YLL046C	ALG6	Q12001	544 aa	Known RBP	5.29	□□□□□ -1.56
RNP1	YLL046C	YDL177C	Q12257	170 aa		5.29	□□□□□ -1.56
RNP1	YLL046C	PTC7	P38797	343 aa		5.28	□□□□□ -1.56
RNP1	YLL046C	PEX7	P39108	375 aa		5.28	□□□□□ -1.56
RNP1	YLL046C	MSH4	P40965	878 aa	Predicted RBP	5.28	□□□□□ -1.56
RNP1	YLL046C	YIG1	Q08956	461 aa		5.28	□□□□□ -1.56
RNP1	YLL046C	YVC1	Q12324	675 aa		5.28	□□□□□ -1.56
RNP1	YLL046C	COB	P00163	385 aa		5.27	□□□□□ -1.57
RNP1	YLL046C	HTS1	P07263	546 aa	Known RBP	5.27	□□□□□ -1.57
RNP1	YLL046C	SHM2	P37291	469 aa	Known RBP	5.27	□□□□□ -1.57
RNP1	YLL046C	DMA2	P53924	522 aa		5.27	□□□□□ -1.57
RNP1	YLL046C	CLU1	Q03690	1277 aa	Known RBP	5.27	□□□□□ -1.57
RNP1	YLL046C	FUR4	P05316	633 aa	Known RBP	5.26	□□□□□ -1.57
RNP1	YLL046C	RPS13	P05756	151 aa	Known RBP	5.26	□□□□□ -1.57
RNP1	YLL046C	NPR1	P22211	790 aa		5.26	□□□□□ -1.57
RNP1	YLL046C	ETP1	P38748	585 aa	Known RBP	5.26	□□□□□ -1.57
RNP1	YLL046C	YPL277C	Q08989	487 aa		5.26	□□□□□ -1.57
RNP1	YLL046C	YLR358C	O13565	187 aa		5.25	□□□□□ -1.57
RNP1	YLL046C	MEC3	Q02574	474 aa		5.25	□□□□□ -1.57
RNP1	YLL046C	CMR1	Q12510	522 aa	Known RBP	5.25	□□□□□ -1.57
RNP1	YLL046C	CTS1	P29029	562 aa		5.24	□□□□□ -1.57
RNP1	YLL046C	REI1	P38344	393 aa	Predicted RBP	5.24	□□□□□ -1.57
RNP1	YLL046C	RIM11	P38615	370 aa		5.24	□□□□□ -1.57
RNP1	YLL046C	GTS1	P40956	396 aa		5.24	□□□□□ -1.57
RNP1	YLL046C	SSA4	P22202	642 aa	Known RBP	5.23	□□□□□ -1.57
RNP1	YLL046C	DUR3	P33413	735 aa		5.23	□□□□□ -1.57
RNP1	YLL046C	BOL3	P39724	118 aa		5.23	□□□□□ -1.57
RNP1	YLL046C	ECM2	P38241	364 aa	Known RBP	5.22	□□□□□ -1.57
RNP1	YLL046C	UTP22	P53254	1237 aa	Predicted RBP	5.22	□□□□□ -1.57
RNP1	YLL046C	SNO2	P53823	222 aa		5.22	□□□□□ -1.57
RNP1	YLL046C	PRP5	P21372	849 aa	Predicted RBP	5.21	□□□□□ -1.58
RNP1	YLL046C	FOL2	P51601	243 aa	Known RBP	5.21	□□□□□ -1.58
RNP1	YLL046C	ELA1	P53861	379 aa	Predicted RBP	5.21	□□□□□ -1.58
RNP1	YLL046C	YML122C	Q03207	126 aa		5.21	□□□□□ -1.58
RNP1	YLL046C	YGR045C	P53229	120 aa		5.2	□□□□□ -1.58
RNP1	YLL046C	SMY2	P32909	740 aa	Known RBP	5.18	□□□□□ -1.58
RNP1	YLL046C	RSC4	Q02206	625 aa		5.18	□□□□□ -1.58
RNP1	YLL046C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
RNP1	YLL046C	NNK1	P36003	928 aa		5.16	□□□□□ -1.58
RNP1	YLL046C	AVO1	Q08236	1176 aa		5.16	□□□□□ -1.58
RNP1	YLL046C	LEO1	P38439	464 aa		5.15	□□□□□ -1.59
RNP1	YLL046C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
RNP1	YLL046C	UFD2	P54860	961 aa		5.14	□□□□□ -1.59
RNP1	YLL046C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-DR6	P0CX70	440 aa		5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-ER1	P0CX71	440 aa		5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-LR2	P0CX72	440 aa		5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-PL	P0CX73	440 aa		5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-JR1	P0CX74	440 aa		5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-LR3	P0CX75	440 aa		5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-ML2	P0CX76	440 aa		5.13	□□□□□ -1.59
RNP1	YLL046C	GLO3	P38682	493 aa	Known RBP	5.13	□□□□□ -1.59
RNP1	YLL046C	PUS7	Q08647	676 aa	Known RBP	5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-GR1	Q12085	440 aa		5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.13	□□□□□ -1.59
RNP1	YLL046C	TY1A-OL	Q92392	440 aa	Known RBP	5.13	□□□□□ -1.59
RNP1	YLL046C	TAT2	P38967	592 aa		5.12	□□□□□ -1.59
RNP1	YLL046C	TPP1	Q03796	238 aa		5.12	□□□□□ -1.59
RNP1	YLL046C	TRM2	P33753	639 aa		5.11	□□□□□ -1.59
RNP1	YLL046C	QDR1	P40475	563 aa		5.11	□□□□□ -1.59
RNP1	YLL046C	SAP155	P43612	1002 aa		5.11	□□□□□ -1.59
RNP1	YLL046C	YOR352W	Q08816	343 aa		5.11	□□□□□ -1.59
RNP1	YLL046C	PUS9	Q12069	462 aa		5.11	□□□□□ -1.59
RNP1	YLL046C	ARL1	P38116	183 aa	Known RBP	5.1	□□□□□ -1.59
RNP1	YLL046C	NMD3	P38861	518 aa	Known RBP	5.1	□□□□□ -1.59
RNP1	YLL046C	NUT1	P53114	1132 aa		5.1	□□□□□ -1.59
RNP1	YLL046C	YAF9	P53930	226 aa		5.1	□□□□□ -1.59
RNP1	YLL046C	FLP1	P03870	423 aa		5.09	□□□□□ -1.59
RNP1	YLL046C	MSE1	P48525	536 aa		5.09	□□□□□ -1.59
RNP1	YLL046C	YNL011C	P53980	444 aa		5.09	□□□□□ -1.59
RNP1	YLL046C	BSC2	Q05611	235 aa		5.09	□□□□□ -1.59
RNP1	YLL046C	PMT7	Q06644	662 aa		5.09	□□□□□ -1.59
RNP1	YLL046C	MCM5	P29496	775 aa	Known RBP	5.08	□□□□□ -1.6
RNP1	YLL046C	SLS1	P42900	643 aa		5.08	□□□□□ -1.6
RNP1	YLL046C	SPT20	P50875	604 aa		5.08	□□□□□ -1.6
RNP1	YLL046C	KAR5	Q04746	504 aa		5.07	□□□□□ -1.6
RNP1	YLL046C	SAM35	P14693	329 aa		5.06	□□□□□ -1.6
RNP1	YLL046C	YKL077W	P36081	392 aa		5.06	□□□□□ -1.6
RNP1	YLL046C	YHL012W	P38709	493 aa		5.06	□□□□□ -1.6
RNP1	YLL046C	RET1	P22276	1149 aa	Known RBP	5.05	□□□□□ -1.6
RNP1	YLL046C	EXO5	P38289	585 aa		5.05	□□□□□ -1.6
RNP1	YLL046C	MON1	P53129	644 aa		5.05	□□□□□ -1.6
RNP1	YLL046C	YLR257W	Q06146	321 aa	Known RBP	5.05	□□□□□ -1.6
RNP1	YLL046C	MNL2	Q12205	849 aa		5.05	□□□□□ -1.6
RNP1	YLL046C	AIM26	P32858	118 aa		5.04	□□□□□ -1.6
RNP1	YLL046C	NEM1	P38757	446 aa		5.04	□□□□□ -1.6
RNP1	YLL046C	TRS120	Q04183	1289 aa		5.04	□□□□□ -1.6
RNP1	YLL046C	INP54	Q08227	384 aa	Known RBP	5.04	□□□□□ -1.6
RNP1	YLL046C	MDL2	P33311	773 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms