RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C CMR1Q12510 522 aaKnown RBP7.08□□□□□ -1.28
RPF2YKR081C NPR1P22211 790 aa7.07□□□□□ -1.28
RPF2YKR081C GCD6P32501 712 aaKnown RBP7.07□□□□□ -1.28
RPF2YKR081C DUR3P33413 735 aa7.07□□□□□ -1.28
RPF2YKR081C SEN54Q02825 467 aaPredicted RBP7.07□□□□□ -1.28
RPF2YKR081C YML020WQ03722 664 aa7.07□□□□□ -1.28
RPF2YKR081C PRP5P21372 849 aaPredicted RBP7.06□□□□□ -1.28
RPF2YKR081C SAP155P43612 1002 aa7.06□□□□□ -1.28
RPF2YKR081C NUT1P53114 1132 aa7.06□□□□□ -1.28
RPF2YKR081C SDH1Q00711 640 aa7.06□□□□□ -1.28
RPF2YKR081C NSI1Q12457 570 aa7.06□□□□□ -1.28
RPF2YKR081C PHO4P07270 312 aaKnown RBP7.05□□□□□ -1.28
RPF2YKR081C MET4P32389 672 aa7.05□□□□□ -1.28
RPF2YKR081C MMM1P41800 426 aa7.05□□□□□ -1.28
RPF2YKR081C PMT7Q06644 662 aa7.05□□□□□ -1.28
RPF2YKR081C VPS35P34110 944 aa7.04□□□□□ -1.28
RPF2YKR081C GPT2P36148 743 aa7.04□□□□□ -1.28
RPF2YKR081C IPL1P38991 367 aa7.04□□□□□ -1.28
RPF2YKR081C THI12P42883 340 aa7.04□□□□□ -1.28
RPF2YKR081C THI5P43534 340 aa7.04□□□□□ -1.28
RPF2YKR081C THI11P47183 340 aa7.04□□□□□ -1.28
RPF2YKR081C THI13Q07748 340 aa7.04□□□□□ -1.28
RPF2YKR081C NOP8Q08287 484 aaPredicted RBP7.04□□□□□ -1.28
RPF2YKR081C WHI5Q12416 295 aa7.04□□□□□ -1.28
RPF2YKR081C RVS167P39743 482 aaKnown RBP7.03□□□□□ -1.28
RPF2YKR081C YCS4Q06156 1176 aa7.03□□□□□ -1.28
RPF2YKR081C WHI3P34761 661 aaKnown RBP7.02□□□□□ -1.29
RPF2YKR081C CIT3P43635 486 aa7.02□□□□□ -1.29
RPF2YKR081C YAF9P53930 226 aa7.02□□□□□ -1.29
RPF2YKR081C DOT1Q04089 582 aaKnown RBP7.02□□□□□ -1.29
RPF2YKR081C YIG1Q08956 461 aa7.02□□□□□ -1.29
RPF2YKR081C HTS1P07263 546 aaKnown RBP7.01□□□□□ -1.29
RPF2YKR081C GCD1P09032 578 aaPredicted RBP7.01□□□□□ -1.29
RPF2YKR081C GCV1P48015 400 aa7.01□□□□□ -1.29
RPF2YKR081C MON1P53129 644 aa7.01□□□□□ -1.29
RPF2YKR081C AOS1Q06624 347 aa7.01□□□□□ -1.29
RPF2YKR081C MCM5P29496 775 aaKnown RBP7□□□□□ -1.29
RPF2YKR081C RCM1P53972 490 aa7□□□□□ -1.29
RPF2YKR081C DAK2P43550 591 aa6.99□□□□□ -1.29
RPF2YKR081C POL12P38121 705 aaPredicted RBP6.98□□□□□ -1.29
RPF2YKR081C UTP22P53254 1237 aaPredicted RBP6.98□□□□□ -1.29
RPF2YKR081C YOR059CQ08448 450 aaKnown RBP6.98□□□□□ -1.29
RPF2YKR081C OXR1Q08952 273 aa6.98□□□□□ -1.29
RPF2YKR081C ELM1P32801 640 aa6.97□□□□□ -1.29
RPF2YKR081C KAR2P16474 682 aaKnown RBP6.96□□□□□ -1.3
RPF2YKR081C RNQ1P25367 405 aa6.96□□□□□ -1.3
RPF2YKR081C PRP40P33203 583 aaKnown RBP6.96□□□□□ -1.3
RPF2YKR081C SEA4P38164 1038 aa6.96□□□□□ -1.3
RPF2YKR081C REI1P38344 393 aaPredicted RBP6.96□□□□□ -1.3
RPF2YKR081C SHU2P38957 223 aa6.96□□□□□ -1.3
RPF2YKR081C MEC3Q02574 474 aa6.96□□□□□ -1.3
RPF2YKR081C ALG6Q12001 544 aaKnown RBP6.96□□□□□ -1.3
RPF2YKR081C RPS4AP0CX35 261 aaKnown RBP6.95□□□□□ -1.3
RPF2YKR081C RPS4BP0CX36 261 aaKnown RBP6.95□□□□□ -1.3
RPF2YKR081C LRG1P35688 1017 aa6.95□□□□□ -1.3
RPF2YKR081C DAL4Q04895 635 aa6.95□□□□□ -1.3
RPF2YKR081C RPT1P33299 467 aaKnown RBP6.94□□□□□ -1.3
RPF2YKR081C SEG2P34250 1132 aa6.94□□□□□ -1.3
RPF2YKR081C UBP5P39944 805 aa6.94□□□□□ -1.3
RPF2YKR081C HEM3P28789 327 aa6.93□□□□□ -1.3
RPF2YKR081C YKL077WP36081 392 aa6.93□□□□□ -1.3
RPF2YKR081C ARL1P38116 183 aaKnown RBP6.93□□□□□ -1.3
RPF2YKR081C ECL1P48235 211 aa6.93□□□□□ -1.3
RPF2YKR081C DFG16Q99234 619 aa6.93□□□□□ -1.3
RPF2YKR081C TY1A-LR4P0C2I8 440 aaKnown RBP6.92□□□□□ -1.3
RPF2YKR081C TY1A-DR6P0CX70 440 aa6.92□□□□□ -1.3
RPF2YKR081C TY1A-ER1P0CX71 440 aa6.92□□□□□ -1.3
RPF2YKR081C TY1A-LR2P0CX72 440 aa6.92□□□□□ -1.3
RPF2YKR081C TY1A-PLP0CX73 440 aa6.92□□□□□ -1.3
RPF2YKR081C TY1A-JR1P0CX74 440 aa6.92□□□□□ -1.3
RPF2YKR081C TY1A-LR3P0CX75 440 aa6.92□□□□□ -1.3
RPF2YKR081C TY1A-ML2P0CX76 440 aa6.92□□□□□ -1.3
RPF2YKR081C NOG1Q02892 647 aaKnown RBP6.92□□□□□ -1.3
RPF2YKR081C TY1A-GR1Q12085 440 aa6.92□□□□□ -1.3
RPF2YKR081C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.92□□□□□ -1.3
RPF2YKR081C TY1A-OLQ92392 440 aaKnown RBP6.92□□□□□ -1.3
RPF2YKR081C EXO5P38289 585 aa6.91□□□□□ -1.3
RPF2YKR081C MSH4P40965 878 aaPredicted RBP6.91□□□□□ -1.3
RPF2YKR081C POL32P47110 350 aa6.91□□□□□ -1.3
RPF2YKR081C ULP1Q02724 621 aa6.91□□□□□ -1.3
RPF2YKR081C AVO1Q08236 1176 aa6.91□□□□□ -1.3
RPF2YKR081C MGE1P38523 228 aa6.9□□□□□ -1.3
RPF2YKR081C RSM26P47141 266 aa6.9□□□□□ -1.3
RPF2YKR081C TOS4Q06266 489 aa6.9□□□□□ -1.3
RPF2YKR081C ADP1P25371 1049 aa6.89□□□□□ -1.31
RPF2YKR081C UGA4P32837 571 aa6.89□□□□□ -1.31
RPF2YKR081C SQT1P35184 431 aa6.89□□□□□ -1.31
RPF2YKR081C ELA1P53861 379 aaPredicted RBP6.89□□□□□ -1.31
RPF2YKR081C HXK1P04806 485 aaKnown RBP6.88□□□□□ -1.31
RPF2YKR081C ASF1P32447 279 aa6.88□□□□□ -1.31
RPF2YKR081C HSP78P33416 811 aa6.88□□□□□ -1.31
RPF2YKR081C OYE3P41816 400 aaPredicted RBP6.88□□□□□ -1.31
RPF2YKR081C YPL109CQ02981 657 aa6.88□□□□□ -1.31
RPF2YKR081C MSH3P25336 1018 aa6.87□□□□□ -1.31
RPF2YKR081C NFS1P25374 497 aa6.87□□□□□ -1.31
RPF2YKR081C FAA3P39002 694 aa6.87□□□□□ -1.31
RPF2YKR081C MTR4P47047 1073 aaKnown RBP6.87□□□□□ -1.31
RPF2YKR081C PRP43P53131 767 aaKnown RBP6.87□□□□□ -1.31
RPF2YKR081C YGR122WP53272 402 aa6.87□□□□□ -1.31
RPF2YKR081C PEX13P80667 386 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms