RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W YCK2P23292 546 aaKnown RBP5.48□□□□□ -1.53
MSN4YKL062W UGA4P32837 571 aa5.48□□□□□ -1.53
MSN4YKL062W SEC8P32855 1065 aa5.48□□□□□ -1.53
MSN4YKL062W MAE1P36013 669 aaKnown RBP5.48□□□□□ -1.53
MSN4YKL062W SLN1P39928 1220 aaPredicted RBP5.48□□□□□ -1.53
MSN4YKL062W DOS2P54858 310 aa5.48□□□□□ -1.53
MSN4YKL062W GAS5Q08193 484 aa5.48□□□□□ -1.53
MSN4YKL062W YDR215CQ12240 137 aa5.48□□□□□ -1.53
MSN4YKL062W SKN7P38889 622 aa5.47□□□□□ -1.53
MSN4YKL062W FAA3P39002 694 aa5.47□□□□□ -1.53
MSN4YKL062W ULP1Q02724 621 aa5.47□□□□□ -1.53
MSN4YKL062W ELG1Q12050 791 aa5.47□□□□□ -1.53
MSN4YKL062W HXK1P04806 485 aaKnown RBP5.47□□□□□ -1.53
MSN4YKL062W SFA1P32771 386 aa5.47□□□□□ -1.53
MSN4YKL062W OCA5P38738 679 aa5.47□□□□□ -1.53
MSN4YKL062W YGR122WP53272 402 aa5.47□□□□□ -1.53
MSN4YKL062W YIG1Q08956 461 aa5.47□□□□□ -1.53
MSN4YKL062W AI3P03877 415 aa5.46□□□□□ -1.54
MSN4YKL062W MCM2P29469 868 aa5.46□□□□□ -1.54
MSN4YKL062W TAT1P38085 619 aa5.46□□□□□ -1.54
MSN4YKL062W SHU2P38957 223 aa5.46□□□□□ -1.54
MSN4YKL062W RPS26AP39938 119 aaKnown RBP5.46□□□□□ -1.54
MSN4YKL062W RPS26BP39939 119 aaKnown RBP5.46□□□□□ -1.54
MSN4YKL062W RTS3P53289 263 aa5.46□□□□□ -1.54
MSN4YKL062W TY1A-NL1Q12391 440 aaKnown RBP5.46□□□□□ -1.54
MSN4YKL062W ERS1P17261 260 aa5.45□□□□□ -1.54
MSN4YKL062W YKL077WP36081 392 aa5.45□□□□□ -1.54
MSN4YKL062W UTP22P53254 1237 aaPredicted RBP5.45□□□□□ -1.54
MSN4YKL062W NOG1Q02892 647 aaKnown RBP5.45□□□□□ -1.54
MSN4YKL062W OYE2Q03558 400 aaKnown RBP5.45□□□□□ -1.54
MSN4YKL062W YJR008WP47085 338 aa5.45□□□□□ -1.54
MSN4YKL062W RSM26P47141 266 aa5.45□□□□□ -1.54
MSN4YKL062W YPL109CQ02981 657 aa5.45□□□□□ -1.54
MSN4YKL062W ADI1Q03677 179 aa5.45□□□□□ -1.54
MSN4YKL062W SQT1P35184 431 aa5.44□□□□□ -1.54
MSN4YKL062W GCV1P48015 400 aa5.44□□□□□ -1.54
MSN4YKL062W PEX13P80667 386 aa5.44□□□□□ -1.54
MSN4YKL062W MEC3Q02574 474 aa5.44□□□□□ -1.54
MSN4YKL062W YMR074CQ04773 145 aa5.44□□□□□ -1.54
MSN4YKL062W SPR28Q04921 423 aa5.44□□□□□ -1.54
MSN4YKL062W YLL054CQ12244 843 aa5.44□□□□□ -1.54
MSN4YKL062W RAD2P07276 1031 aa5.43□□□□□ -1.54
MSN4YKL062W CYC8P14922 966 aa5.43□□□□□ -1.54
MSN4YKL062W MSH3P25336 1018 aa5.43□□□□□ -1.54
MSN4YKL062W RSC6P25632 483 aa5.43□□□□□ -1.54
MSN4YKL062W EXO5P38289 585 aa5.43□□□□□ -1.54
MSN4YKL062W FYV10P40492 516 aa5.43□□□□□ -1.54
MSN4YKL062W MRPS18P42847 217 aa5.43□□□□□ -1.54
MSN4YKL062W KIP3P53086 805 aaKnown RBP5.43□□□□□ -1.54
MSN4YKL062W ARI1P53111 347 aaKnown RBP5.43□□□□□ -1.54
MSN4YKL062W MTC5Q03897 1148 aa5.43□□□□□ -1.54
MSN4YKL062W MCD1Q12158 566 aa5.43□□□□□ -1.54
MSN4YKL062W TY1A-LR4P0C2I8 440 aaKnown RBP5.42□□□□□ -1.54
MSN4YKL062W TY1A-DR6P0CX70 440 aa5.42□□□□□ -1.54
MSN4YKL062W TY1A-ER1P0CX71 440 aa5.42□□□□□ -1.54
MSN4YKL062W TY1A-LR2P0CX72 440 aa5.42□□□□□ -1.54
MSN4YKL062W TY1A-PLP0CX73 440 aa5.42□□□□□ -1.54
MSN4YKL062W TY1A-JR1P0CX74 440 aa5.42□□□□□ -1.54
MSN4YKL062W TY1A-LR3P0CX75 440 aa5.42□□□□□ -1.54
MSN4YKL062W TY1A-ML2P0CX76 440 aa5.42□□□□□ -1.54
MSN4YKL062W TPO2P53283 614 aa5.42□□□□□ -1.54
MSN4YKL062W SUB1P54000 292 aaKnown RBP5.42□□□□□ -1.54
MSN4YKL062W MCA1Q08601 432 aa5.42□□□□□ -1.54
MSN4YKL062W TY1A-GR1Q12085 440 aa5.42□□□□□ -1.54
MSN4YKL062W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.42□□□□□ -1.54
MSN4YKL062W TY1A-OLQ92392 440 aaKnown RBP5.42□□□□□ -1.54
MSN4YKL062W PRE9P23638 258 aaKnown RBP5.41□□□□□ -1.54
MSN4YKL062W PEX28P38848 579 aa5.41□□□□□ -1.54
MSN4YKL062W NCE103P53615 221 aa5.41□□□□□ -1.54
MSN4YKL062W VPS72Q03388 795 aa5.41□□□□□ -1.54
MSN4YKL062W PEP7P32609 515 aa5.41□□□□□ -1.54
MSN4YKL062W REI1P38344 393 aaPredicted RBP5.41□□□□□ -1.54
MSN4YKL062W CCT8P47079 568 aaKnown RBP5.41□□□□□ -1.54
MSN4YKL062W YOR223WQ12015 292 aa5.41□□□□□ -1.54
MSN4YKL062W GIN4Q12263 1142 aa5.41□□□□□ -1.54
MSN4YKL062W ARL1P38116 183 aaKnown RBP5.4□□□□□ -1.55
MSN4YKL062W PIC2P40035 300 aa5.4□□□□□ -1.55
MSN4YKL062W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.4□□□□□ -1.55not detected
MSN4YKL062W VMA4P22203 233 aaKnown RBP5.39□□□□□ -1.55
MSN4YKL062W SLS1P42900 643 aa5.39□□□□□ -1.55
MSN4YKL062W LSB3P43603 459 aaKnown RBP5.39□□□□□ -1.55
MSN4YKL062W YGL140CP53120 1219 aa5.39□□□□□ -1.55
MSN4YKL062W MDG1P53885 366 aa5.39□□□□□ -1.55
MSN4YKL062W ALG6Q12001 544 aaKnown RBP5.39□□□□□ -1.55
MSN4YKL062W REC8Q12188 680 aa5.39□□□□□ -1.55
MSN4YKL062W YPL034WQ03083 165 aa5.39□□□□□ -1.55
MSN4YKL062W RMD1Q03441 430 aa5.39□□□□□ -1.55
MSN4YKL062W ESF1Q06344 628 aaKnown RBP5.39□□□□□ -1.55
MSN4YKL062W NEM1P38757 446 aa5.38□□□□□ -1.55
MSN4YKL062W MTR4P47047 1073 aaKnown RBP5.38□□□□□ -1.55
MSN4YKL062W DOT1Q04089 582 aaKnown RBP5.38□□□□□ -1.55
MSN4YKL062W OSW7P43611 510 aa5.37□□□□□ -1.55
MSN4YKL062W RDH54P38086 958 aa5.37□□□□□ -1.55
MSN4YKL062W UTP5Q04177 643 aaKnown RBP5.37□□□□□ -1.55
MSN4YKL062W AVO1Q08236 1176 aa5.37□□□□□ -1.55
MSN4YKL062W BUD21Q08492 214 aaPredicted RBP5.37□□□□□ -1.55
MSN4YKL062W HEM13P11353 328 aaKnown RBP5.36□□□□□ -1.55
MSN4YKL062W SEC23P15303 768 aaKnown RBP5.36□□□□□ -1.55
MSN4YKL062W NAM7P30771 971 aaKnown RBP5.36□□□□□ -1.55
MSN4YKL062W GPT2P36148 743 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms