RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W RVS167P39743 482 aaKnown RBP5.53□□□□□ -1.52
RPF1YHR088W NUT1P53114 1132 aa5.53□□□□□ -1.52
RPF1YHR088W GCD1P09032 578 aaPredicted RBP5.52□□□□□ -1.53
RPF1YHR088W WHI3P34761 661 aaKnown RBP5.52□□□□□ -1.53
RPF1YHR088W REI1P38344 393 aaPredicted RBP5.52□□□□□ -1.53
RPF1YHR088W SHU2P38957 223 aa5.52□□□□□ -1.53
RPF1YHR088W ALT1P52893 592 aa5.52□□□□□ -1.53
RPF1YHR088W YAF9P53930 226 aa5.52□□□□□ -1.53
RPF1YHR088W SDH1Q00711 640 aa5.52□□□□□ -1.53
RPF1YHR088W RPS4AP0CX35 261 aaKnown RBP5.51□□□□□ -1.53
RPF1YHR088W RPS4BP0CX36 261 aaKnown RBP5.51□□□□□ -1.53
RPF1YHR088W DUR3P33413 735 aa5.51□□□□□ -1.53
RPF1YHR088W NNK1P36003 928 aa5.5□□□□□ -1.53
RPF1YHR088W UBP5P39944 805 aa5.5□□□□□ -1.53
RPF1YHR088W MSH4P40965 878 aaPredicted RBP5.5□□□□□ -1.53
RPF1YHR088W OYE3P41816 400 aaPredicted RBP5.5□□□□□ -1.53
RPF1YHR088W SAM37P50110 327 aa5.5□□□□□ -1.53
RPF1YHR088W ORC3P54790 616 aa5.5□□□□□ -1.53
RPF1YHR088W DFG16Q99234 619 aa5.5□□□□□ -1.53
RPF1YHR088W ADP1P25371 1049 aa5.49□□□□□ -1.53
RPF1YHR088W SMY2P32909 740 aaKnown RBP5.49□□□□□ -1.53
RPF1YHR088W YKL077WP36081 392 aa5.49□□□□□ -1.53
RPF1YHR088W GEF1P37020 779 aa5.49□□□□□ -1.53
RPF1YHR088W POL12P38121 705 aaPredicted RBP5.49□□□□□ -1.53
RPF1YHR088W PRP43P53131 767 aaKnown RBP5.49□□□□□ -1.53
RPF1YHR088W NOC3Q07896 663 aaPredicted RBP5.49□□□□□ -1.53
RPF1YHR088W MCM5P29496 775 aaKnown RBP5.48□□□□□ -1.53
RPF1YHR088W GRS1P38088 690 aaKnown RBP5.48□□□□□ -1.53
RPF1YHR088W CIC1P38779 376 aaKnown RBP5.48□□□□□ -1.53
RPF1YHR088W MDJ2P42834 146 aa5.48□□□□□ -1.53
RPF1YHR088W INP54Q08227 384 aaKnown RBP5.48□□□□□ -1.53
RPF1YHR088W AVO1Q08236 1176 aa5.48□□□□□ -1.53
RPF1YHR088W SEG2P34250 1132 aa5.47□□□□□ -1.53
RPF1YHR088W SEA4P38164 1038 aa5.47□□□□□ -1.53
RPF1YHR088W TRE1Q08919 783 aa5.47□□□□□ -1.53
RPF1YHR088W YBL113CQ7M4S9 792 aa5.47□□□□□ -1.53
RPF1YHR088W NFS1P25374 497 aa5.46□□□□□ -1.54
RPF1YHR088W HSP78P33416 811 aa5.46□□□□□ -1.54
RPF1YHR088W LRG1P35688 1017 aa5.46□□□□□ -1.54
RPF1YHR088W ERP5P38819 212 aa5.46□□□□□ -1.54
RPF1YHR088W YGR045CP53229 120 aa5.46□□□□□ -1.54
RPF1YHR088W YCS4Q06156 1176 aa5.46□□□□□ -1.54
RPF1YHR088W NUT2Q06213 157 aa5.45□□□□□ -1.54
RPF1YHR088W ALG6Q12001 544 aaKnown RBP5.45□□□□□ -1.54
RPF1YHR088W YVC1Q12324 675 aa5.45□□□□□ -1.54
RPF1YHR088W RNQ1P25367 405 aa5.44□□□□□ -1.54
RPF1YHR088W NOG1Q02892 647 aaKnown RBP5.44□□□□□ -1.54
RPF1YHR088W EXO5P38289 585 aa5.43□□□□□ -1.54
RPF1YHR088W HSE1P38753 452 aa5.43□□□□□ -1.54
RPF1YHR088W PEX7P39108 375 aa5.43□□□□□ -1.54
RPF1YHR088W MTR4P47047 1073 aaKnown RBP5.43□□□□□ -1.54
RPF1YHR088W ELA1P53861 379 aaPredicted RBP5.43□□□□□ -1.54
RPF1YHR088W TY1A-LR4P0C2I8 440 aaKnown RBP5.42□□□□□ -1.54
RPF1YHR088W TY1A-DR6P0CX70 440 aa5.42□□□□□ -1.54
RPF1YHR088W TY1A-ER1P0CX71 440 aa5.42□□□□□ -1.54
RPF1YHR088W TY1A-LR2P0CX72 440 aa5.42□□□□□ -1.54
RPF1YHR088W TY1A-PLP0CX73 440 aa5.42□□□□□ -1.54
RPF1YHR088W TY1A-JR1P0CX74 440 aa5.42□□□□□ -1.54
RPF1YHR088W TY1A-LR3P0CX75 440 aa5.42□□□□□ -1.54
RPF1YHR088W TY1A-ML2P0CX76 440 aa5.42□□□□□ -1.54
RPF1YHR088W KAR2P16474 682 aaKnown RBP5.42□□□□□ -1.54
RPF1YHR088W GCD6P32501 712 aaKnown RBP5.42□□□□□ -1.54
RPF1YHR088W GPI13Q07830 1017 aa5.42□□□□□ -1.54
RPF1YHR088W TY1A-GR1Q12085 440 aa5.42□□□□□ -1.54
RPF1YHR088W HAT1Q12341 374 aa5.42□□□□□ -1.54
RPF1YHR088W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.42□□□□□ -1.54
RPF1YHR088W TY1A-OLQ92392 440 aaKnown RBP5.42□□□□□ -1.54
RPF1YHR088W FRT1Q99332 602 aa5.42□□□□□ -1.54
RPF1YHR088W GAS1P22146 559 aaKnown RBP5.41□□□□□ -1.54
RPF1YHR088W VPS35P34110 944 aa5.41□□□□□ -1.54
RPF1YHR088W MON1P53129 644 aa5.41□□□□□ -1.54
RPF1YHR088W SSY1Q03770 852 aa5.41□□□□□ -1.54
RPF1YHR088W LAP2Q10740 671 aa5.41□□□□□ -1.54
RPF1YHR088W PRO1P32264 428 aa5.4□□□□□ -1.54
RPF1YHR088W YAR028WP39548 234 aa5.4□□□□□ -1.54
RPF1YHR088W EAR1Q03212 550 aa5.4□□□□□ -1.54
RPF1YHR088W PUS7Q08647 676 aaKnown RBP5.4□□□□□ -1.54
RPF1YHR088W VMA4P22203 233 aaKnown RBP5.39□□□□□ -1.55
RPF1YHR088W TSA1P34760 196 aaKnown RBP5.39□□□□□ -1.55
RPF1YHR088W ATG14P38270 344 aa5.39□□□□□ -1.55
RPF1YHR088W SLS1P42900 643 aa5.39□□□□□ -1.55
RPF1YHR088W CDA2Q06703 312 aa5.39□□□□□ -1.55
RPF1YHR088W HRK1Q08732 759 aaKnown RBP5.39□□□□□ -1.55
RPF1YHR088W LPX1Q12405 387 aaKnown RBP5.39□□□□□ -1.55
RPF1YHR088W NEM1P38757 446 aa5.38□□□□□ -1.55
RPF1YHR088W TPP1Q03796 238 aa5.38□□□□□ -1.55
RPF1YHR088W RKM2Q03942 479 aa5.37□□□□□ -1.55
RPF1YHR088W UTP5Q04177 643 aaKnown RBP5.37□□□□□ -1.55
RPF1YHR088W RET1P22276 1149 aaKnown RBP5.36□□□□□ -1.55
RPF1YHR088W MSH3P25336 1018 aa5.36□□□□□ -1.55
RPF1YHR088W YCR015CP25616 317 aa5.36□□□□□ -1.55
RPF1YHR088W PRP40P33203 583 aaKnown RBP5.36□□□□□ -1.55
RPF1YHR088W MDL2P33311 773 aa5.36□□□□□ -1.55
RPF1YHR088W PPX1P38698 397 aa5.36□□□□□ -1.55
RPF1YHR088W PTC7P38797 343 aa5.36□□□□□ -1.55
RPF1YHR088W STM1P39015 273 aaKnown RBP5.36□□□□□ -1.55
RPF1YHR088W FOL2P51601 243 aaKnown RBP5.36□□□□□ -1.55
RPF1YHR088W ENV11P53246 860 aa5.36□□□□□ -1.55
RPF1YHR088W PHO4P07270 312 aaKnown RBP5.35□□□□□ -1.55
RPF1YHR088W PRP6P19735 899 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms