RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W RPG1P38249 964 aaKnown RBP8.71□□□□□ -1.01
YRF1-3YGR296W RTS1P38903 757 aa8.71□□□□□ -1.01
YRF1-3YGR296W CPA2P03965 1118 aaKnown RBP8.71□□□□□ -1.02
YRF1-3YGR296W SEC18P18759 758 aaKnown RBP8.71□□□□□ -1.02
YRF1-3YGR296W PEX5P35056 612 aa8.71□□□□□ -1.02
YRF1-3YGR296W YAP5P40574 245 aa8.71□□□□□ -1.02
YRF1-3YGR296W RPT4P53549 437 aaKnown RBP8.71□□□□□ -1.02
YRF1-3YGR296W MGM1P32266 881 aa8.71□□□□□ -1.02
YRF1-3YGR296W YMR114CQ04471 368 aaKnown RBP8.71□□□□□ -1.02
YRF1-3YGR296W YKU70P32807 602 aa8.7□□□□□ -1.02
YRF1-3YGR296W LTV1P34078 463 aa8.7□□□□□ -1.02
YRF1-3YGR296W YIR014WP40570 242 aa8.7□□□□□ -1.02
YRF1-3YGR296W CPR6P53691 371 aaKnown RBP8.7□□□□□ -1.02
YRF1-3YGR296W AAD16Q02895 342 aa8.7□□□□□ -1.02
YRF1-3YGR296W NOP14Q99207 810 aaKnown RBP8.7□□□□□ -1.02
YRF1-3YGR296W GAL2P13181 574 aa8.7□□□□□ -1.02
YRF1-3YGR296W VTC4P47075 721 aa8.7□□□□□ -1.02
YRF1-3YGR296W GLE1Q12315 538 aa8.7□□□□□ -1.02
YRF1-3YGR296W VPS53P47061 822 aa8.7□□□□□ -1.02
YRF1-3YGR296W TY4A-HQ6Q5P6 413 aa8.7□□□□□ -1.02
YRF1-3YGR296W DCD1P06773 312 aa8.7□□□□□ -1.02
YRF1-3YGR296W KAR3P17119 729 aa8.7□□□□□ -1.02
YRF1-3YGR296W SUB1P54000 292 aaKnown RBP8.7□□□□□ -1.02
YRF1-3YGR296W VPS9P54787 451 aa8.7□□□□□ -1.02
YRF1-3YGR296W BMH2P34730 273 aaKnown RBP8.7□□□□□ -1.02
YRF1-3YGR296W SCD6P45978 349 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
YRF1-3YGR296W CTR9P89105 1077 aa8.7□□□□□ -1.02
YRF1-3YGR296W YAH1Q12184 172 aaKnown RBP8.7□□□□□ -1.02
YRF1-3YGR296W YLL058WQ12198 575 aa8.7□□□□□ -1.02
YRF1-3YGR296W VPS72Q03388 795 aa8.69□□□□□ -1.02
YRF1-3YGR296W IRC20Q06554 1556 aa8.69□□□□□ -1.02
YRF1-3YGR296W MLH2Q07980 695 aa8.69□□□□□ -1.02
YRF1-3YGR296W CCM1P48237 864 aaPredicted RBP8.69□□□□□ -1.02
YRF1-3YGR296W DNF2Q12675 1612 aa8.69□□□□□ -1.02
YRF1-3YGR296W TRM44Q02648 567 aaKnown RBP8.69□□□□□ -1.02
YRF1-3YGR296W SYH1Q02875 849 aaKnown RBP8.69□□□□□ -1.02
YRF1-3YGR296W RER2P35196 286 aa8.68□□□□□ -1.02
YRF1-3YGR296W AKR1P39010 764 aa8.68□□□□□ -1.02
YRF1-3YGR296W HOP2P53187 214 aa8.68□□□□□ -1.02
YRF1-3YGR296W FCP1Q03254 732 aa8.68□□□□□ -1.02
YRF1-3YGR296W ILV1P00927 576 aaKnown RBP8.68□□□□□ -1.02
YRF1-3YGR296W MCM2P29469 868 aa8.68□□□□□ -1.02
YRF1-3YGR296W CCL1P37366 393 aa8.68□□□□□ -1.02
YRF1-3YGR296W CTH1P47976 325 aa8.68□□□□□ -1.02
YRF1-3YGR296W SYF1Q04048 859 aaPredicted RBP8.68□□□□□ -1.02
YRF1-3YGR296W HAP1P0CE41 1502 aa8.68□□□□□ -1.02
YRF1-3YGR296W PDC1P06169 563 aaKnown RBP8.68□□□□□ -1.02
YRF1-3YGR296W UBP13P38187 747 aa8.68□□□□□ -1.02
YRF1-3YGR296W YFH7P43591 353 aa8.68□□□□□ -1.02
YRF1-3YGR296W SEC27P41811 889 aaKnown RBP8.67□□□□□ -1.02
YRF1-3YGR296W NPA3P47122 385 aa8.67□□□□□ -1.02
YRF1-3YGR296W UTP22P53254 1237 aaPredicted RBP8.67□□□□□ -1.02
YRF1-3YGR296W SQS1P53866 767 aaKnown RBP8.67□□□□□ -1.02
YRF1-3YGR296W RPS15Q01855 142 aaKnown RBP8.67□□□□□ -1.02
YRF1-3YGR296W RPT6Q01939 405 aaKnown RBP8.67□□□□□ -1.02
YRF1-3YGR296W VPS38Q05919 439 aa8.67□□□□□ -1.02
YRF1-3YGR296W DBP5P20449 482 aaKnown RBP8.67□□□□□ -1.02
YRF1-3YGR296W RDS1P25611 832 aa8.67□□□□□ -1.02
YRF1-3YGR296W RPC17P47076 161 aa8.67□□□□□ -1.02
YRF1-3YGR296W CSR1Q06705 408 aaKnown RBP8.67□□□□□ -1.02
YRF1-3YGR296W ALO1P54783 526 aaKnown RBP8.67□□□□□ -1.02
YRF1-3YGR296W ACK1Q07622 623 aaPredicted RBP8.67□□□□□ -1.02
YRF1-3YGR296W AUS1Q08409 1394 aa8.67□□□□□ -1.02
YRF1-3YGR296W SEC65P29478 273 aa8.67□□□□□ -1.02
YRF1-3YGR296W CRG1P38892 291 aaRIP-Chip data8.67□□□□□ -1.02not detected
YRF1-3YGR296W SEG2P34250 1132 aa8.67□□□□□ -1.02
YRF1-3YGR296W NPR3P38742 1146 aa8.67□□□□□ -1.02
YRF1-3YGR296W SAK1P38990 1142 aa8.67□□□□□ -1.02
YRF1-3YGR296W ATG36P46983 293 aa8.67□□□□□ -1.02
YRF1-3YGR296W TRS120Q04183 1289 aa8.67□□□□□ -1.02
YRF1-3YGR296W RRB1Q04225 511 aaKnown RBP8.67□□□□□ -1.02
YRF1-3YGR296W CYB2P00175 591 aa8.66□□□□□ -1.02
YRF1-3YGR296W KGD2P19262 463 aaPredicted RBP8.66□□□□□ -1.02
YRF1-3YGR296W CCT4P39078 528 aaKnown RBP8.66□□□□□ -1.02
YRF1-3YGR296W CWC22P53333 577 aaKnown RBP8.66□□□□□ -1.02
YRF1-3YGR296W SPP382Q06411 708 aaPredicted RBP8.66□□□□□ -1.02
YRF1-3YGR296W SPO21Q12411 609 aa8.66□□□□□ -1.02
YRF1-3YGR296W PMA1P05030 918 aaKnown RBP8.66□□□□□ -1.02
YRF1-3YGR296W MAK11P20484 414 aaKnown RBP8.66□□□□□ -1.02
YRF1-3YGR296W YDL124WQ07551 312 aaKnown RBP8.66□□□□□ -1.02
YRF1-3YGR296W TOA1P32773 286 aa8.66□□□□□ -1.02
YRF1-3YGR296W PPS1P38148 807 aa8.66□□□□□ -1.02
YRF1-3YGR296W DIP2Q12220 943 aaPredicted RBP8.66□□□□□ -1.02
YRF1-3YGR296W LYS2P07702 1392 aa8.65□□□□□ -1.02
YRF1-3YGR296W MRC1P25588 1096 aa8.65□□□□□ -1.02
YRF1-3YGR296W CTM1P38818 585 aa8.65□□□□□ -1.02
YRF1-3YGR296W LYS14P40971 790 aa8.65□□□□□ -1.02
YRF1-3YGR296W MDM38Q08179 573 aa8.65□□□□□ -1.02
YRF1-3YGR296W RPN7Q06103 429 aaKnown RBP8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-LR1P0C2J3 1770 aa8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-FP0CX63 1770 aa8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-GR2P0CX64 1770 aa8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-CP25384 1770 aa8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-DR2Q03494 1770 aa8.65□□□□□ -1.02
YRF1-3YGR296W TY1B-DR1Q03855 1755 aa8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-DR3Q07791 1770 aaKnown RBP8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-OR1Q12113 1770 aa8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-DR1Q12472 1770 aa8.65□□□□□ -1.02
YRF1-3YGR296W TY2B-OR2Q12501 1770 aa8.65□□□□□ -1.02
YRF1-3YGR296W VPS75P53853 264 aa8.65□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms