RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W YIG1Q08956 461 aa5.37□□□□□ -1.55
VMA21YGR105W UGA4P32837 571 aa5.36□□□□□ -1.55
VMA21YGR105W UTP22P53254 1237 aaPredicted RBP5.36□□□□□ -1.55
VMA21YGR105W NOP8Q08287 484 aaPredicted RBP5.36□□□□□ -1.55
VMA21YGR105W PRP40P33203 583 aaKnown RBP5.35□□□□□ -1.55
VMA21YGR105W TY1A-LR4P0C2I8 440 aaKnown RBP5.34□□□□□ -1.55
VMA21YGR105W TY1A-DR6P0CX70 440 aa5.34□□□□□ -1.55
VMA21YGR105W TY1A-ER1P0CX71 440 aa5.34□□□□□ -1.55
VMA21YGR105W TY1A-LR2P0CX72 440 aa5.34□□□□□ -1.55
VMA21YGR105W TY1A-PLP0CX73 440 aa5.34□□□□□ -1.55
VMA21YGR105W TY1A-JR1P0CX74 440 aa5.34□□□□□ -1.55
VMA21YGR105W TY1A-LR3P0CX75 440 aa5.34□□□□□ -1.55
VMA21YGR105W TY1A-ML2P0CX76 440 aa5.34□□□□□ -1.55
VMA21YGR105W RPT1P33299 467 aaKnown RBP5.34□□□□□ -1.55
VMA21YGR105W SAF1P38352 637 aa5.34□□□□□ -1.55
VMA21YGR105W GCV1P48015 400 aa5.34□□□□□ -1.55
VMA21YGR105W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
VMA21YGR105W OXR1Q08952 273 aa5.34□□□□□ -1.55
VMA21YGR105W ALG6Q12001 544 aaKnown RBP5.34□□□□□ -1.55
VMA21YGR105W YOR223WQ12015 292 aa5.34□□□□□ -1.55
VMA21YGR105W TY1A-GR1Q12085 440 aa5.34□□□□□ -1.55
VMA21YGR105W YLR122CQ12312 125 aa5.34□□□□□ -1.55
VMA21YGR105W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.34□□□□□ -1.55
VMA21YGR105W TY1A-OLQ92392 440 aaKnown RBP5.34□□□□□ -1.55
VMA21YGR105W ALO1P54783 526 aaKnown RBP5.33□□□□□ -1.56
VMA21YGR105W MEC3Q02574 474 aa5.33□□□□□ -1.56
VMA21YGR105W YLL054CQ12244 843 aa5.33□□□□□ -1.56
VMA21YGR105W YKL077WP36081 392 aa5.32□□□□□ -1.56
VMA21YGR105W KAE1P36132 386 aa5.32□□□□□ -1.56
VMA21YGR105W GPT2P36148 743 aa5.32□□□□□ -1.56
VMA21YGR105W EXO5P38289 585 aa5.32□□□□□ -1.56
VMA21YGR105W REI1P38344 393 aaPredicted RBP5.32□□□□□ -1.56
VMA21YGR105W ULP1Q02724 621 aa5.32□□□□□ -1.56
VMA21YGR105W DOT1Q04089 582 aaKnown RBP5.32□□□□□ -1.56
VMA21YGR105W TRP3P00937 484 aa5.31□□□□□ -1.56
VMA21YGR105W KAR2P16474 682 aaKnown RBP5.31□□□□□ -1.56
VMA21YGR105W FAA3P39002 694 aa5.31□□□□□ -1.56
VMA21YGR105W SLS1P42900 643 aa5.31□□□□□ -1.56
VMA21YGR105W POL32P47110 350 aa5.31□□□□□ -1.56
VMA21YGR105W PEX13P80667 386 aa5.31□□□□□ -1.56
VMA21YGR105W GIC2Q06648 383 aa5.31□□□□□ -1.56
VMA21YGR105W CHS2P14180 963 aa5.3□□□□□ -1.56
VMA21YGR105W ATE1P16639 503 aa5.3□□□□□ -1.56
VMA21YGR105W SHU2P38957 223 aa5.3□□□□□ -1.56
VMA21YGR105W RSM26P47141 266 aa5.3□□□□□ -1.56
VMA21YGR105W YGR130CP53278 816 aa5.3□□□□□ -1.56
VMA21YGR105W NOG1Q02892 647 aaKnown RBP5.3□□□□□ -1.56
VMA21YGR105W MSH3P25336 1018 aa5.29□□□□□ -1.56
VMA21YGR105W NEM1P38757 446 aa5.29□□□□□ -1.56
VMA21YGR105W HXK1P04806 485 aaKnown RBP5.28□□□□□ -1.56
VMA21YGR105W HEM3P28789 327 aa5.28□□□□□ -1.56
VMA21YGR105W SQT1P35184 431 aa5.28□□□□□ -1.56
VMA21YGR105W YGR045CP53229 120 aa5.28□□□□□ -1.56
VMA21YGR105W ELA1P53861 379 aaPredicted RBP5.28□□□□□ -1.56
VMA21YGR105W YPL109CQ02981 657 aa5.28□□□□□ -1.56
VMA21YGR105W MCM2P29469 868 aa5.27□□□□□ -1.57
VMA21YGR105W YKR073CP36153 106 aa5.27□□□□□ -1.57
VMA21YGR105W OMA1P36163 345 aa5.27□□□□□ -1.57
VMA21YGR105W MGE1P38523 228 aa5.27□□□□□ -1.57
VMA21YGR105W PEX28P38848 579 aa5.27□□□□□ -1.57
VMA21YGR105W SPO74P45819 413 aa5.27□□□□□ -1.57
VMA21YGR105W ADI1Q03677 179 aa5.27□□□□□ -1.57
VMA21YGR105W AVO1Q08236 1176 aa5.27□□□□□ -1.57
VMA21YGR105W MED7Q08278 222 aa5.27□□□□□ -1.57
VMA21YGR105W WHI3P34761 661 aaKnown RBP5.26□□□□□ -1.57
VMA21YGR105W ARL1P38116 183 aaKnown RBP5.26□□□□□ -1.57
VMA21YGR105W MSH4P40965 878 aaPredicted RBP5.26□□□□□ -1.57
VMA21YGR105W RRP15Q06511 250 aaPredicted RBP5.26□□□□□ -1.57
VMA21YGR105W RPS4AP0CX35 261 aaKnown RBP5.25□□□□□ -1.57
VMA21YGR105W RPS4BP0CX36 261 aaKnown RBP5.25□□□□□ -1.57
VMA21YGR105W MAC1P35192 417 aa5.25□□□□□ -1.57
VMA21YGR105W RPS26AP39938 119 aaKnown RBP5.25□□□□□ -1.57
VMA21YGR105W RPS26BP39939 119 aaKnown RBP5.25□□□□□ -1.57
VMA21YGR105W PIC2P40035 300 aa5.25□□□□□ -1.57
VMA21YGR105W MTR4P47047 1073 aaKnown RBP5.25□□□□□ -1.57
VMA21YGR105W YGR122WP53272 402 aa5.25□□□□□ -1.57
VMA21YGR105W UTP5Q04177 643 aaKnown RBP5.25□□□□□ -1.57
VMA21YGR105W CYC7P00045 113 aa5.24□□□□□ -1.57
VMA21YGR105W HEM13P11353 328 aaKnown RBP5.24□□□□□ -1.57
VMA21YGR105W MSB1P21339 1137 aaKnown RBP5.24□□□□□ -1.57
VMA21YGR105W TOS1P38288 455 aa5.24□□□□□ -1.57
VMA21YGR105W MMM1P41800 426 aa5.24□□□□□ -1.57
VMA21YGR105W INP52P50942 1183 aa5.24□□□□□ -1.57
VMA21YGR105W YGL140CP53120 1219 aa5.24□□□□□ -1.57
VMA21YGR105W NRD1P53617 575 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
VMA21YGR105W EAR1Q03212 550 aa5.24□□□□□ -1.57
VMA21YGR105W NFS1P25374 497 aa5.23□□□□□ -1.57
VMA21YGR105W FYV10P40492 516 aa5.23□□□□□ -1.57
VMA21YGR105W XKS1P42826 600 aa5.23□□□□□ -1.57
VMA21YGR105W YJR107WP47145 328 aa5.23□□□□□ -1.57
VMA21YGR105W YNR063WP53749 607 aa5.23□□□□□ -1.57
VMA21YGR105W SPR28Q04921 423 aa5.23□□□□□ -1.57
VMA21YGR105W RAD2P07276 1031 aa5.22□□□□□ -1.57
VMA21YGR105W CYC8P14922 966 aa5.22□□□□□ -1.57
VMA21YGR105W VMA4P22203 233 aaKnown RBP5.22□□□□□ -1.57
VMA21YGR105W SEC8P32855 1065 aa5.22□□□□□ -1.57
VMA21YGR105W RDH54P38086 958 aa5.22□□□□□ -1.57
VMA21YGR105W YAR028WP39548 234 aa5.22□□□□□ -1.57
VMA21YGR105W MRPS18P42847 217 aa5.22□□□□□ -1.57
VMA21YGR105W CIT3P43635 486 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms