RNA–Protein interactions for RNA: YGL045W

RIM8, Transcript of Protein involved in proteolytic activation of Rim101p, yeast

Gene RIM8, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM8	YGL045W	NTH2	P35172	780 aa		10.15	□□□□□ -0.78
RIM8	YGL045W	MCX1	P38323	520 aa	Predicted RBP	10.15	□□□□□ -0.78
RIM8	YGL045W	YBR287W	P38355	427 aa		10.15	□□□□□ -0.78
RIM8	YGL045W	PIH1	P38768	344 aa		10.15	□□□□□ -0.78
RIM8	YGL045W	BEM4	P39011	633 aa		10.15	□□□□□ -0.78
RIM8	YGL045W	HUL5	P53119	910 aa		10.15	□□□□□ -0.78
RIM8	YGL045W	BRE1	Q07457	700 aa	Known RBP	10.15	□□□□□ -0.78
RIM8	YGL045W	PDR18	P53756	1333 aa		10.15	□□□□□ -0.79
RIM8	YGL045W	SMF1	P38925	575 aa		10.15	□□□□□ -0.79
RIM8	YGL045W	MDJ2	P42834	146 aa		10.15	□□□□□ -0.79
RIM8	YGL045W	YMR085W	P0CF18	432 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	TUP1	P16649	713 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	SWC3	P31376	625 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	PPH3	P32345	308 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	ECM4	P36156	370 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	SRL3	P36167	246 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	PPX1	P38698	397 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	BOI2	P39969	1040 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	PEA2	P40091	420 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	10.14	□□□□□ -0.79	not detected
RIM8	YGL045W	SPR3	P41901	512 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	MRPS35	P53292	345 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	ADA2	Q02336	434 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	YKU80	Q04437	629 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	RRP5	Q05022	1729 aa	Known RBP	10.14	□□□□□ -0.79
RIM8	YGL045W	CIR2	Q08822	631 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	YOL098C	Q12496	1037 aa		10.14	□□□□□ -0.79
RIM8	YGL045W	RPL22A	P05749	121 aa	Known RBP	10.13	□□□□□ -0.79
RIM8	YGL045W	NAT1	P12945	854 aa	Known RBP	10.13	□□□□□ -0.79
RIM8	YGL045W	TAL1	P15019	335 aa	Known RBP	10.13	□□□□□ -0.79
RIM8	YGL045W	UBP1	P25037	809 aa		10.13	□□□□□ -0.79
RIM8	YGL045W	TOA1	P32773	286 aa		10.13	□□□□□ -0.79
RIM8	YGL045W	SEC66	P33754	206 aa		10.13	□□□□□ -0.79
RIM8	YGL045W	AIM20	P40451	204 aa		10.13	□□□□□ -0.79
RIM8	YGL045W	YGR122W	P53272	402 aa		10.13	□□□□□ -0.79
RIM8	YGL045W	RMD1	Q03441	430 aa		10.13	□□□□□ -0.79
RIM8	YGL045W	CDC8	P00572	216 aa		10.12	□□□□□ -0.79
RIM8	YGL045W	RAD53	P22216	821 aa		10.12	□□□□□ -0.79
RIM8	YGL045W	IPL1	P38991	367 aa		10.12	□□□□□ -0.79
RIM8	YGL045W	EFM4	P40516	257 aa		10.12	□□□□□ -0.79
RIM8	YGL045W	GCN20	P43535	752 aa	Known RBP	10.12	□□□□□ -0.79
RIM8	YGL045W	MTR4	P47047	1073 aa	Known RBP	10.12	□□□□□ -0.79
RIM8	YGL045W	IST1	P53843	298 aa	Predicted RBP	10.12	□□□□□ -0.79
RIM8	YGL045W	SPC24	Q04477	213 aa		10.12	□□□□□ -0.79
RIM8	YGL045W	GGA1	Q06336	557 aa		10.12	□□□□□ -0.79
RIM8	YGL045W	APC1	P53886	1748 aa		10.12	□□□□□ -0.79
RIM8	YGL045W	TY4B-P	A0A0B7P3V8	1104 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	COQ4	O13525	335 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	EFM2	P38347	419 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	MAG2	Q06436	670 aa	Known RBP	10.11	□□□□□ -0.79
RIM8	YGL045W	NKP1	Q12493	238 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	MATALPHA2	P0CY08	210 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	HMLALPHA2	P0CY09	210 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	PGI1	P12709	554 aa	Known RBP	10.11	□□□□□ -0.79
RIM8	YGL045W	ARI1	P53111	347 aa	Known RBP	10.11	□□□□□ -0.79
RIM8	YGL045W	YLR407W	Q06070	228 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	TSR1	Q07381	788 aa	Known RBP	10.11	□□□□□ -0.79
RIM8	YGL045W	IOC2	Q12072	812 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	YRF1-1	P0CX20	1796 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	YRF1-5	P0CX21	1796 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	YRF1-8	P0CX22	1796 aa		10.11	□□□□□ -0.79
RIM8	YGL045W	MCM4	P30665	933 aa	Known RBP	10.1	□□□□□ -0.79
RIM8	YGL045W	LOS1	P33418	1100 aa	Predicted RBP	10.1	□□□□□ -0.79
RIM8	YGL045W	LEM3	P42838	414 aa		10.1	□□□□□ -0.79
RIM8	YGL045W	YFR006W	P43590	535 aa		10.1	□□□□□ -0.79
RIM8	YGL045W	ORM1	P53224	222 aa		10.1	□□□□□ -0.79
RIM8	YGL045W	YML119W	Q03208	357 aa		10.1	□□□□□ -0.79
RIM8	YGL045W	KRE28	Q04431	385 aa		10.1	□□□□□ -0.79
RIM8	YGL045W	NOC3	Q07896	663 aa	Predicted RBP	10.1	□□□□□ -0.79
RIM8	YGL045W	CHS5	Q12114	671 aa	Known RBP	10.1	□□□□□ -0.79
RIM8	YGL045W	JIP3	O13555	125 aa		10.09	□□□□□ -0.79
RIM8	YGL045W	CLN1	P20437	546 aa		10.09	□□□□□ -0.79
RIM8	YGL045W	REV7	P38927	245 aa		10.09	□□□□□ -0.79
RIM8	YGL045W	VID27	P40157	782 aa		10.09	□□□□□ -0.79
RIM8	YGL045W	GVP36	P40531	326 aa	Known RBP	10.09	□□□□□ -0.79
RIM8	YGL045W	ENP2	P48234	707 aa	Known RBP	10.09	□□□□□ -0.79
RIM8	YGL045W	YPL109C	Q02981	657 aa		10.09	□□□□□ -0.79
RIM8	YGL045W	MMR1	Q06324	491 aa		10.09	□□□□□ -0.79
RIM8	YGL045W	TYR1	P20049	452 aa		10.08	□□□□□ -0.8
RIM8	YGL045W	ADE17	P38009	592 aa	Known RBP	10.08	□□□□□ -0.8
RIM8	YGL045W	CDC27	P38042	758 aa		10.08	□□□□□ -0.8
RIM8	YGL045W	SHE10	P53075	577 aa		10.08	□□□□□ -0.8
RIM8	YGL045W	ERG5	P54781	538 aa		10.08	□□□□□ -0.8
RIM8	YGL045W	HCR1	Q05775	265 aa	Known RBP	10.08	□□□□□ -0.8
RIM8	YGL045W	DCS2	Q12123	353 aa		10.08	□□□□□ -0.8
RIM8	YGL045W	PRT1	P06103	763 aa	Known RBP	10.07	□□□□□ -0.8
RIM8	YGL045W	PIF1	P07271	859 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	PDR1	P12383	1068 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	BRF1	P29056	596 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	RPC37	P36121	282 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	NUP60	P39705	539 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	ADE12	P80210	433 aa	Known RBP	10.07	□□□□□ -0.8
RIM8	YGL045W	GTR1	Q00582	310 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	NGL3	Q03210	505 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	SLK19	Q08581	821 aa	Known RBP	10.07	□□□□□ -0.8
RIM8	YGL045W	MET7	Q08645	548 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	HMI1	Q12039	706 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	YRF1-2	P40105	1681 aa		10.07	□□□□□ -0.8
RIM8	YGL045W	ADE3	P07245	946 aa	Known RBP	10.07	□□□□□ -0.8
RIM8	YGL045W	SEC8	P32855	1065 aa		10.07	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms