RNA–Protein interactions for RNA: YFR054C

YFR054C, Transcript of Dubious open reading frame, yeast

Gene YFR054C, Length 579 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFR054C	YFR054C	YAF9	P53930	226 aa		4.28	□□□□□ -1.72
YFR054C	YFR054C	GDE1	Q02979	1223 aa		4.28	□□□□□ -1.72
YFR054C	YFR054C	MRL1	Q06815	381 aa		4.28	□□□□□ -1.72
YFR054C	YFR054C	TMA46	Q12000	345 aa	Known RBP	4.28	□□□□□ -1.72
YFR054C	YFR054C	SSF2	Q12153	453 aa	Predicted RBP	4.28	□□□□□ -1.72
YFR054C	YFR054C	TAT1	P38085	619 aa		4.27	□□□□□ -1.73
YFR054C	YFR054C	OSW7	P43611	510 aa		4.27	□□□□□ -1.73
YFR054C	YFR054C	SAP155	P43612	1002 aa		4.27	□□□□□ -1.73
YFR054C	YFR054C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
YFR054C	YFR054C	PEX13	P80667	386 aa		4.27	□□□□□ -1.73
YFR054C	YFR054C	RTT10	Q08924	1013 aa		4.27	□□□□□ -1.73
YFR054C	YFR054C	TAF13	P11747	167 aa		4.26	□□□□□ -1.73
YFR054C	YFR054C	NPR1	P22211	790 aa		4.26	□□□□□ -1.73
YFR054C	YFR054C	YOR131C	Q12486	218 aa		4.26	□□□□□ -1.73
YFR054C	YFR054C	NHA1	Q99271	985 aa		4.26	□□□□□ -1.73
YFR054C	YFR054C	YKL091C	P33324	310 aa	Known RBP	4.25	□□□□□ -1.73
YFR054C	YFR054C	DUR3	P33413	735 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	YKL077W	P36081	392 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	ALG14	P38242	237 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	RIM11	P38615	370 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	PEX28	P38848	579 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	SLN1	P39928	1220 aa	Predicted RBP	4.25	□□□□□ -1.73
YFR054C	YFR054C	PIC2	P40035	300 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	PRK1	P40494	810 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	INP51	P40559	946 aa	Known RBP	4.25	□□□□□ -1.73
YFR054C	YFR054C	FET4	P40988	552 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	XKS1	P42826	600 aa		4.25	□□□□□ -1.73
YFR054C	YFR054C	FAL1	Q12099	399 aa	Known RBP	4.25	□□□□□ -1.73
YFR054C	YFR054C	CMR1	Q12510	522 aa	Known RBP	4.25	□□□□□ -1.73
YFR054C	YFR054C	GCR1	P07261	785 aa		4.24	□□□□□ -1.73
YFR054C	YFR054C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
YFR054C	YFR054C	ATG14	P38270	344 aa		4.24	□□□□□ -1.73
YFR054C	YFR054C	AMN1	P38285	549 aa	Predicted RBP	4.24	□□□□□ -1.73
YFR054C	YFR054C	YJR124C	P47159	448 aa		4.24	□□□□□ -1.73
YFR054C	YFR054C	FAA4	P47912	694 aa	Known RBP	4.24	□□□□□ -1.73
YFR054C	YFR054C	CDC53	Q12018	815 aa	Known RBP	4.24	□□□□□ -1.73
YFR054C	YFR054C	GLO4	Q12320	285 aa		4.24	□□□□□ -1.73
YFR054C	YFR054C	PRI2	P20457	528 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	PRP5	P21372	849 aa	Predicted RBP	4.23	□□□□□ -1.73
YFR054C	YFR054C	MSH3	P25336	1018 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	PGM2	P37012	569 aa	Known RBP	4.23	□□□□□ -1.73
YFR054C	YFR054C	BRN1	P38170	754 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	NMD2	P38798	1089 aa	Known RBP	4.23	□□□□□ -1.73
YFR054C	YFR054C	NEO1	P40527	1151 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	LEM3	P42838	414 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	PRY1	P47032	299 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	YGL140C	P53120	1219 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	YGR053C	P53234	283 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	BIO5	P53744	561 aa	Known RBP	4.23	□□□□□ -1.73
YFR054C	YFR054C	NOG1	Q02892	647 aa	Known RBP	4.23	□□□□□ -1.73
YFR054C	YFR054C	NSE3	Q05541	303 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	TDA5	Q06417	326 aa	Known RBP	4.23	□□□□□ -1.73
YFR054C	YFR054C	MCA1	Q08601	432 aa		4.23	□□□□□ -1.73
YFR054C	YFR054C	SEC23	P15303	768 aa	Known RBP	4.22	□□□□□ -1.73
YFR054C	YFR054C	VMA4	P22203	233 aa	Known RBP	4.22	□□□□□ -1.73
YFR054C	YFR054C	GRX1	P25373	110 aa	Known RBP	4.22	□□□□□ -1.73
YFR054C	YFR054C	PPG1	P32838	368 aa		4.22	□□□□□ -1.73
YFR054C	YFR054C	LSB6	P42951	607 aa		4.22	□□□□□ -1.73
YFR054C	YFR054C	MTR4	P47047	1073 aa	Known RBP	4.22	□□□□□ -1.73
YFR054C	YFR054C	GUP1	P53154	560 aa		4.22	□□□□□ -1.73
YFR054C	YFR054C	NAN1	Q02931	896 aa	Known RBP	4.22	□□□□□ -1.73
YFR054C	YFR054C	GIS4	Q04233	774 aa		4.22	□□□□□ -1.73
YFR054C	YFR054C	SPO20	Q04359	397 aa		4.22	□□□□□ -1.73
YFR054C	YFR054C	OPI10	Q08202	246 aa		4.22	□□□□□ -1.73
YFR054C	YFR054C	SOG2	Q08817	791 aa		4.22	□□□□□ -1.73
YFR054C	YFR054C	HTS1	P07263	546 aa	Known RBP	4.21	□□□□□ -1.74
YFR054C	YFR054C	BAS1	P22035	811 aa		4.21	□□□□□ -1.74
YFR054C	YFR054C	NAR1	P23503	491 aa	Known RBP	4.21	□□□□□ -1.74
YFR054C	YFR054C	SNF7	P39929	240 aa	Known RBP	4.21	□□□□□ -1.74
YFR054C	YFR054C	IOC3	P43596	787 aa		4.21	□□□□□ -1.74
YFR054C	YFR054C	ENT3	P47160	408 aa		4.21	□□□□□ -1.74
YFR054C	YFR054C	UTP22	P53254	1237 aa	Predicted RBP	4.21	□□□□□ -1.74
YFR054C	YFR054C	YNR065C	P53751	1116 aa		4.21	□□□□□ -1.74
YFR054C	YFR054C	HDA2	Q06629	674 aa		4.21	□□□□□ -1.74
YFR054C	YFR054C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
YFR054C	YFR054C	DUT1	P33317	147 aa		4.2	□□□□□ -1.74
YFR054C	YFR054C	TFA2	P36145	328 aa		4.2	□□□□□ -1.74
YFR054C	YFR054C	TYW3	P53177	273 aa		4.2	□□□□□ -1.74
YFR054C	YFR054C	SIW14	P53965	281 aa		4.2	□□□□□ -1.74
YFR054C	YFR054C	HVG1	P0CE11	249 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	EXO5	P38289	585 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	SPF1	P39986	1215 aa	Known RBP	4.19	□□□□□ -1.74
YFR054C	YFR054C	TIM54	P47045	478 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	BUD9	P53226	547 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	RNH70	P53331	553 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	DOS2	P54858	310 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	YPL034W	Q03083	165 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	RPN4	Q03465	531 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	BDF2	Q07442	638 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	YIG1	Q08956	461 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	YLL054C	Q12244	843 aa		4.19	□□□□□ -1.74
YFR054C	YFR054C	MRP10	O75012	95 aa		4.18	□□□□□ -1.74
YFR054C	YFR054C	TRP2	P00899	507 aa	Known RBP	4.18	□□□□□ -1.74
YFR054C	YFR054C	DED1	P06634	604 aa	Known RBP	4.18	□□□□□ -1.74
YFR054C	YFR054C	RAD4	P14736	754 aa		4.18	□□□□□ -1.74
YFR054C	YFR054C	LYP1	P32487	611 aa		4.18	□□□□□ -1.74
YFR054C	YFR054C	ARL1	P38116	183 aa	Known RBP	4.18	□□□□□ -1.74
YFR054C	YFR054C	SOK2	P53438	785 aa	Predicted RBP	4.18	□□□□□ -1.74
YFR054C	YFR054C	EEB1	Q02891	456 aa		4.18	□□□□□ -1.74
YFR054C	YFR054C	HAS1	Q03532	505 aa	Known RBP	4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms