RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C TOP2P06786 1428 aaKnown RBP6.41□□□□□ -1.38
NUP42YDR192C COBP00163 385 aa6.4□□□□□ -1.38
NUP42YDR192C SQT1P35184 431 aa6.4□□□□□ -1.38
NUP42YDR192C MON1P53129 644 aa6.4□□□□□ -1.38
NUP42YDR192C ULP1Q02724 621 aa6.4□□□□□ -1.38
NUP42YDR192C SYT1Q06836 1226 aa6.4□□□□□ -1.38
NUP42YDR192C DRS2P39524 1355 aa6.4□□□□□ -1.39
NUP42YDR192C TAF13P11747 167 aa6.39□□□□□ -1.39
NUP42YDR192C MCM5P29496 775 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C RIM11P38615 370 aa6.39□□□□□ -1.39
NUP42YDR192C INP51P40559 946 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C LEM3P42838 414 aa6.39□□□□□ -1.39
NUP42YDR192C NNF1P47149 201 aa6.39□□□□□ -1.39
NUP42YDR192C YAF9P53930 226 aa6.39□□□□□ -1.39
NUP42YDR192C VPS16Q03308 798 aa6.39□□□□□ -1.39
NUP42YDR192C TY1A-DR2Q03964 440 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C TY1B-HO13535 1793 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-DR5P0C2I2 1755 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-DR6P0C2I3 1755 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-LR2P0C2I5 1755 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-LR3P0C2I6 1755 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C TY1B-PR1P0C2I9 1755 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C TY1B-PR2P0C2J0 1756 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-PR3P0C2J1 1755 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C TY1B-JR1P47098 1755 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-ML2Q03434 1755 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C TY1B-ER1Q03612 1755 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-ML1Q04711 1755 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C TY1B-GR2Q12269 1755 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-OLQ12273 1755 aa6.39□□□□□ -1.39
NUP42YDR192C TY1B-PLQ12414 1755 aaKnown RBP6.39□□□□□ -1.39
NUP42YDR192C CCP1P00431 361 aa6.38□□□□□ -1.39
NUP42YDR192C PRP5P21372 849 aaPredicted RBP6.38□□□□□ -1.39
NUP42YDR192C NPR1P22211 790 aa6.38□□□□□ -1.39
NUP42YDR192C YIR007WP40566 764 aa6.38□□□□□ -1.39
NUP42YDR192C RSM26P47141 266 aa6.38□□□□□ -1.39
NUP42YDR192C BIO5P53744 561 aaKnown RBP6.38□□□□□ -1.39
NUP42YDR192C ALD3P54114 506 aa6.38□□□□□ -1.39
NUP42YDR192C TOS4Q06266 489 aa6.38□□□□□ -1.39
NUP42YDR192C GLO4Q12320 285 aa6.38□□□□□ -1.39
NUP42YDR192C SMC4Q12267 1418 aa6.38□□□□□ -1.39
NUP42YDR192C TY2B-BQ12491 1770 aa6.38□□□□□ -1.39
NUP42YDR192C PRK1P40494 810 aa6.37□□□□□ -1.39
NUP42YDR192C YJL181WP46987 611 aa6.37□□□□□ -1.39
NUP42YDR192C GUP1P53154 560 aa6.37□□□□□ -1.39
NUP42YDR192C SOG2Q08817 791 aa6.37□□□□□ -1.39
NUP42YDR192C CMR1Q12510 522 aaKnown RBP6.37□□□□□ -1.39
NUP42YDR192C STH1P32597 1359 aa6.36□□□□□ -1.39
NUP42YDR192C FET4P40988 552 aa6.36□□□□□ -1.39
NUP42YDR192C CAF120P53836 1060 aa6.36□□□□□ -1.39
NUP42YDR192C ORC1P54784 914 aaPredicted RBP6.36□□□□□ -1.39
NUP42YDR192C MAG2Q06436 670 aaKnown RBP6.36□□□□□ -1.39
NUP42YDR192C YOR1P53049 1477 aa6.35□□□□□ -1.39
NUP42YDR192C DUR3P33413 735 aa6.35□□□□□ -1.39
NUP42YDR192C NOG1Q02892 647 aaKnown RBP6.35□□□□□ -1.39
NUP42YDR192C SLP1Q12232 587 aa6.35□□□□□ -1.39
NUP42YDR192C HVG1P0CE11 249 aa6.34□□□□□ -1.39
NUP42YDR192C KNS1P32350 737 aaPredicted RBP6.34□□□□□ -1.39
NUP42YDR192C KRI1P42846 591 aaKnown RBP6.34□□□□□ -1.39
NUP42YDR192C YJR124CP47159 448 aa6.34□□□□□ -1.39
NUP42YDR192C CWC24P53769 259 aa6.34□□□□□ -1.39
NUP42YDR192C MYO4P32492 1471 aa6.34□□□□□ -1.4
NUP42YDR192C CDC34P14682 295 aa6.33□□□□□ -1.4
NUP42YDR192C UGA4P32837 571 aa6.33□□□□□ -1.4
NUP42YDR192C YKL077WP36081 392 aa6.33□□□□□ -1.4
NUP42YDR192C AMN1P38285 549 aaPredicted RBP6.33□□□□□ -1.4
NUP42YDR192C VAC8P39968 578 aa6.33□□□□□ -1.4
NUP42YDR192C YJL049WP47048 450 aa6.33□□□□□ -1.4
NUP42YDR192C ENT3P47160 408 aa6.33□□□□□ -1.4
NUP42YDR192C ALD6P54115 500 aaKnown RBP6.33□□□□□ -1.4
NUP42YDR192C RTT10Q08924 1013 aa6.33□□□□□ -1.4
NUP42YDR192C TMA46Q12000 345 aaKnown RBP6.33□□□□□ -1.4
NUP42YDR192C TY1B-DR3Q99231 1755 aa6.33□□□□□ -1.4
NUP42YDR192C VPS15P22219 1454 aa6.33□□□□□ -1.4
NUP42YDR192C YOR093CQ12275 1648 aa6.32□□□□□ -1.4
NUP42YDR192C GBP2P25555 427 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
NUP42YDR192C RAD27P26793 382 aa6.32□□□□□ -1.4
NUP42YDR192C TFA2P36145 328 aa6.32□□□□□ -1.4
NUP42YDR192C OCA5P38738 679 aa6.32□□□□□ -1.4
NUP42YDR192C PEX28P38848 579 aa6.32□□□□□ -1.4
NUP42YDR192C WRS1Q12109 432 aaKnown RBP6.32□□□□□ -1.4
NUP42YDR192C DPH6Q12429 685 aa6.32□□□□□ -1.4
NUP42YDR192C TRM732Q03496 1420 aa6.32□□□□□ -1.4
NUP42YDR192C MMS22Q06164 1454 aa6.31□□□□□ -1.4
NUP42YDR192C SEC23P15303 768 aaKnown RBP6.31□□□□□ -1.4
NUP42YDR192C PDC5P16467 563 aaKnown RBP6.31□□□□□ -1.4
NUP42YDR192C VMA4P22203 233 aaKnown RBP6.31□□□□□ -1.4
NUP42YDR192C GAR1P28007 205 aaKnown RBP6.31□□□□□ -1.4
NUP42YDR192C PIC2P40035 300 aa6.31□□□□□ -1.4
NUP42YDR192C JJJ3P47138 172 aa6.31□□□□□ -1.4
NUP42YDR192C YNR065CP53751 1116 aa6.31□□□□□ -1.4
NUP42YDR192C GPM1P00950 247 aaKnown RBP6.3□□□□□ -1.4
NUP42YDR192C HTS1P07263 546 aaKnown RBP6.3□□□□□ -1.4
NUP42YDR192C MSH3P25336 1018 aa6.3□□□□□ -1.4
NUP42YDR192C ARL1P38116 183 aaKnown RBP6.3□□□□□ -1.4
NUP42YDR192C NEO1P40527 1151 aa6.3□□□□□ -1.4
NUP42YDR192C LSB6P42951 607 aa6.3□□□□□ -1.4
NUP42YDR192C PEX13P80667 386 aa6.3□□□□□ -1.4
NUP42YDR192C SPO71Q03868 1245 aa6.3□□□□□ -1.4
NUP42YDR192C MRL1Q06815 381 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms