RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C FOB1O13329 566 aa5.2□□□□□ -1.58
CDC9YDL164C GAL1P04385 528 aa5.2□□□□□ -1.58
CDC9YDL164C SST2P11972 698 aaKnown RBP5.2□□□□□ -1.58
CDC9YDL164C BAS1P22035 811 aa5.2□□□□□ -1.58
CDC9YDL164C MRF1P30775 413 aaPredicted RBP5.2□□□□□ -1.58
CDC9YDL164C YJR115WP47152 169 aa5.2□□□□□ -1.58
CDC9YDL164C NMA111P53920 997 aa5.2□□□□□ -1.58
CDC9YDL164C ISU2Q12056 156 aa5.2□□□□□ -1.58
CDC9YDL164C FAL1Q12099 399 aaKnown RBP5.2□□□□□ -1.58
CDC9YDL164C PRP40P33203 583 aaKnown RBP5.19□□□□□ -1.58
CDC9YDL164C MTC2P34246 357 aa5.19□□□□□ -1.58
CDC9YDL164C SPC105P53148 917 aa5.19□□□□□ -1.58
CDC9YDL164C APP1P53933 587 aa5.19□□□□□ -1.58
CDC9YDL164C PEA2P40091 420 aa5.18□□□□□ -1.58
CDC9YDL164C MRPS18P42847 217 aa5.18□□□□□ -1.58
CDC9YDL164C PIP2P52960 996 aa5.18□□□□□ -1.58
CDC9YDL164C YNL193WP53870 558 aa5.18□□□□□ -1.58
CDC9YDL164C UBX4P54730 416 aa5.18□□□□□ -1.58
CDC9YDL164C OXR1Q08952 273 aa5.18□□□□□ -1.58
CDC9YDL164C RAM1P22007 431 aa5.18□□□□□ -1.58
CDC9YDL164C ABD1P32783 436 aaPredicted RBP5.18□□□□□ -1.58
CDC9YDL164C RPS0AP32905 252 aaKnown RBP5.18□□□□□ -1.58
CDC9YDL164C VBA5P36172 582 aa5.18□□□□□ -1.58
CDC9YDL164C ULP1Q02724 621 aa5.18□□□□□ -1.58
CDC9YDL164C MCD1Q12158 566 aa5.18□□□□□ -1.58
CDC9YDL164C SAP30P38429 201 aa5.17□□□□□ -1.58
CDC9YDL164C EMW1P42842 904 aaKnown RBP5.17□□□□□ -1.58
CDC9YDL164C MET14Q02196 202 aa5.17□□□□□ -1.58
CDC9YDL164C ELP4Q02884 456 aaKnown RBP5.17□□□□□ -1.58
CDC9YDL164C REC8Q12188 680 aa5.17□□□□□ -1.58
CDC9YDL164C IES1P43579 692 aa5.17□□□□□ -1.58
CDC9YDL164C ARH1P48360 493 aa5.17□□□□□ -1.58
CDC9YDL164C UME1Q03010 460 aa5.17□□□□□ -1.58
CDC9YDL164C UGO1Q03327 502 aa5.17□□□□□ -1.58
CDC9YDL164C YPQ2Q06328 317 aa5.17□□□□□ -1.58
CDC9YDL164C SBP1P10080 294 aaKnown RBP5.16□□□□□ -1.58
CDC9YDL164C HSP60P19882 572 aaKnown RBP5.16□□□□□ -1.58
CDC9YDL164C NAB2P32505 525 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
CDC9YDL164C TFC4P33339 1025 aa5.16□□□□□ -1.58
CDC9YDL164C YAP1801P38856 637 aa5.16□□□□□ -1.58
CDC9YDL164C NYV1Q12255 253 aa5.16□□□□□ -1.58
CDC9YDL164C TIF6Q12522 245 aaKnown RBP5.16□□□□□ -1.58
CDC9YDL164C YEF3P16521 1044 aaKnown RBP5.16□□□□□ -1.58
CDC9YDL164C OPI1P21957 404 aa5.16□□□□□ -1.58
CDC9YDL164C SIS1P25294 352 aaKnown RBP5.16□□□□□ -1.58
CDC9YDL164C VMA3P25515 160 aa5.16□□□□□ -1.58
CDC9YDL164C HSP78P33416 811 aa5.16□□□□□ -1.58
CDC9YDL164C NDE1P40215 560 aa5.16□□□□□ -1.58
CDC9YDL164C HSV2P50079 448 aaPredicted RBP5.16□□□□□ -1.58
CDC9YDL164C PEX14P53112 341 aa5.16□□□□□ -1.58
CDC9YDL164C HAP5Q02516 242 aa5.16□□□□□ -1.58
CDC9YDL164C PSR1Q07800 427 aa5.16□□□□□ -1.58
CDC9YDL164C RTT10Q08924 1013 aa5.16□□□□□ -1.58
CDC9YDL164C FLP1P03870 423 aa5.15□□□□□ -1.58
CDC9YDL164C TOP3P13099 656 aa5.15□□□□□ -1.58
CDC9YDL164C HSC82P15108 705 aaKnown RBP5.15□□□□□ -1.58
CDC9YDL164C PES4P39684 611 aa5.15□□□□□ -1.58
CDC9YDL164C GDH3P39708 457 aa5.15□□□□□ -1.58
CDC9YDL164C YNL165WP53891 406 aa5.15□□□□□ -1.58
CDC9YDL164C MEH1Q02205 184 aa5.15□□□□□ -1.58
CDC9YDL164C YDR344CQ05510 147 aa5.15□□□□□ -1.58
CDC9YDL164C YCS4Q06156 1176 aa5.15□□□□□ -1.58
CDC9YDL164C ATG20Q07528 640 aa5.15□□□□□ -1.58
CDC9YDL164C ALR1Q08269 859 aa5.15□□□□□ -1.58
CDC9YDL164C AGP1P25376 633 aa5.14□□□□□ -1.59
CDC9YDL164C CIC1P38779 376 aaKnown RBP5.14□□□□□ -1.59
CDC9YDL164C IRR1P40541 1150 aa5.14□□□□□ -1.59
CDC9YDL164C HXT8P40886 569 aa5.14□□□□□ -1.59
CDC9YDL164C YFL034WP43564 1073 aa5.14□□□□□ -1.59
CDC9YDL164C HLJ1P48353 224 aa5.14□□□□□ -1.59
CDC9YDL164C ADI1Q03677 179 aa5.14□□□□□ -1.59
CDC9YDL164C EAF1Q06337 982 aa5.14□□□□□ -1.59
CDC9YDL164C TRP2P00899 507 aaKnown RBP5.14□□□□□ -1.59
CDC9YDL164C APM2P38700 605 aa5.14□□□□□ -1.59
CDC9YDL164C MGS1P40151 587 aa5.14□□□□□ -1.59
CDC9YDL164C RSC8P43609 557 aaKnown RBP5.14□□□□□ -1.59
CDC9YDL164C UTP8P53276 713 aaKnown RBP5.14□□□□□ -1.59
CDC9YDL164C SHE9Q04172 456 aa5.14□□□□□ -1.59
CDC9YDL164C YPL066WQ12194 479 aa5.14□□□□□ -1.59
CDC9YDL164C MDM12Q92328 271 aa5.14□□□□□ -1.59
CDC9YDL164C ECM32P32644 1121 aaKnown RBP5.13□□□□□ -1.59
CDC9YDL164C PEX6P33760 1030 aa5.13□□□□□ -1.59
CDC9YDL164C XDJ1P39102 459 aa5.13□□□□□ -1.59
CDC9YDL164C YML131WQ03102 365 aa5.13□□□□□ -1.59
CDC9YDL164C YLR225CQ05948 407 aaKnown RBP5.13□□□□□ -1.59
CDC9YDL164C HOM3P10869 527 aa5.13□□□□□ -1.59
CDC9YDL164C KTR4P38131 464 aa5.13□□□□□ -1.59
CDC9YDL164C GGA2P38817 585 aaKnown RBP5.13□□□□□ -1.59
CDC9YDL164C NMD3P38861 518 aaKnown RBP5.13□□□□□ -1.59
CDC9YDL164C HXT10P43581 546 aa5.13□□□□□ -1.59
CDC9YDL164C PMT3P47190 753 aa5.13□□□□□ -1.59
CDC9YDL164C CWH41P53008 833 aa5.13□□□□□ -1.59
CDC9YDL164C GRX3Q03835 250 aa5.13□□□□□ -1.59
CDC9YDL164C SPO75Q07798 868 aa5.13□□□□□ -1.59
CDC9YDL164C BUD20Q08004 166 aaPredicted RBP5.13□□□□□ -1.59
CDC9YDL164C MSN1P22148 382 aa5.12□□□□□ -1.59
CDC9YDL164C DPB3P27344 201 aa5.12□□□□□ -1.59
CDC9YDL164C HBS1P32769 611 aaKnown RBP5.12□□□□□ -1.59
CDC9YDL164C RER2P35196 286 aa5.12□□□□□ -1.59
CDC9YDL164C YHL041WP38730 149 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms