RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C YRO2P38079 344 aa1.23□□□□□ -2.21
VAM6YDL077C VPS41P38959 992 aa1.23□□□□□ -2.21
VAM6YDL077C BOI2P39969 1040 aa1.23□□□□□ -2.21
VAM6YDL077C CSN12P47130 423 aa1.23□□□□□ -2.21
VAM6YDL077C HST1P53685 503 aa1.23□□□□□ -2.21
VAM6YDL077C MDG1P53885 366 aa1.23□□□□□ -2.21
VAM6YDL077C RIA1P53893 1110 aa1.23□□□□□ -2.21
VAM6YDL077C VTC3Q02725 835 aa1.23□□□□□ -2.21
VAM6YDL077C RPN7Q06103 429 aaKnown RBP1.23□□□□□ -2.21
VAM6YDL077C ARR1Q06596 294 aa1.23□□□□□ -2.21
VAM6YDL077C MDM38Q08179 573 aa1.23□□□□□ -2.21
VAM6YDL077C SLK19Q08581 821 aaKnown RBP1.23□□□□□ -2.21
VAM6YDL077C ROM2P51862 1356 aaKnown RBP1.23□□□□□ -2.21
VAM6YDL077C SSK22P25390 1331 aaPredicted RBP1.22□□□□□ -2.21
VAM6YDL077C TAL1P15019 335 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C RPC82P32349 654 aa1.22□□□□□ -2.21
VAM6YDL077C HIR2P32480 875 aa1.22□□□□□ -2.21
VAM6YDL077C YEL043WP32618 956 aa1.22□□□□□ -2.21
VAM6YDL077C CAJ1P39101 391 aa1.22□□□□□ -2.21
VAM6YDL077C RPT2P40327 437 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C ALA1P40825 983 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C SBE2P42223 864 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C UTP22P53254 1237 aaPredicted RBP1.22□□□□□ -2.21
VAM6YDL077C YNR021WP53723 404 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C JJJ1P53863 590 aa1.22□□□□□ -2.21
VAM6YDL077C FAR11P53917 953 aa1.22□□□□□ -2.21
VAM6YDL077C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
VAM6YDL077C ISU1Q03020 165 aa1.22□□□□□ -2.21
VAM6YDL077C IMH1Q06704 911 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C BMS1Q08965 1183 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C YDR461C-AQ2V2P7 80 aa1.22□□□□□ -2.21
VAM6YDL077C RAD2P07276 1031 aa1.22□□□□□ -2.21
VAM6YDL077C NAT1P12945 854 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C FPS1P23900 669 aa1.22□□□□□ -2.21
VAM6YDL077C CLB1P24868 471 aa1.22□□□□□ -2.21
VAM6YDL077C PHO84P25297 587 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C DUR3P33413 735 aa1.22□□□□□ -2.21
VAM6YDL077C SWH1P35845 1188 aa1.22□□□□□ -2.21
VAM6YDL077C TAT1P38085 619 aa1.22□□□□□ -2.21
VAM6YDL077C HSM3P38348 480 aa1.22□□□□□ -2.21
VAM6YDL077C TIF5P38431 405 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C ECM1P39715 212 aa1.22□□□□□ -2.21
VAM6YDL077C RRT14P40470 206 aa1.22□□□□□ -2.21
VAM6YDL077C RSM25P40496 264 aa1.22□□□□□ -2.21
VAM6YDL077C LSG1P53145 640 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C RNH1Q04740 348 aa1.22□□□□□ -2.21
VAM6YDL077C SML1Q04964 104 aa1.22□□□□□ -2.21
VAM6YDL077C SYT1Q06836 1226 aa1.22□□□□□ -2.21
VAM6YDL077C HMI1Q12039 706 aa1.22□□□□□ -2.21
VAM6YDL077C ATG9Q12142 997 aa1.22□□□□□ -2.21
VAM6YDL077C RAD59Q12223 238 aa1.22□□□□□ -2.21
VAM6YDL077C GIN4Q12263 1142 aa1.22□□□□□ -2.21
VAM6YDL077C URB1P34241 1764 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C APC1P53886 1748 aa1.22□□□□□ -2.21
VAM6YDL077C PDR11P40550 1411 aa1.22□□□□□ -2.21
VAM6YDL077C ADE6P38972 1358 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C TY2B-LR1P0C2J3 1770 aa1.22□□□□□ -2.21
VAM6YDL077C TY2B-FP0CX63 1770 aa1.22□□□□□ -2.21
VAM6YDL077C TY2B-GR2P0CX64 1770 aa1.22□□□□□ -2.21
VAM6YDL077C TY2B-CP25384 1770 aa1.22□□□□□ -2.21
VAM6YDL077C TY2B-DR2Q03494 1770 aa1.22□□□□□ -2.21
VAM6YDL077C TY1B-DR1Q03855 1755 aa1.22□□□□□ -2.21
VAM6YDL077C TY2B-DR3Q07791 1770 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C TY2B-OR1Q12113 1770 aa1.22□□□□□ -2.21
VAM6YDL077C TY2B-DR1Q12472 1770 aa1.22□□□□□ -2.21
VAM6YDL077C TY2B-BQ12491 1770 aa1.22□□□□□ -2.21
VAM6YDL077C TY2B-OR2Q12501 1770 aa1.22□□□□□ -2.21
VAM6YDL077C RPL22AP05749 121 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C SEC14P24280 304 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C MSH3P25336 1018 aa1.22□□□□□ -2.21
VAM6YDL077C CDC48P25694 835 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C UTR2P32623 467 aa1.22□□□□□ -2.21
VAM6YDL077C NFU1P32860 256 aa1.22□□□□□ -2.21
VAM6YDL077C SRL3P36167 246 aa1.22□□□□□ -2.21
VAM6YDL077C BRN1P38170 754 aa1.22□□□□□ -2.21
VAM6YDL077C MCX1P38323 520 aaPredicted RBP1.22□□□□□ -2.21
VAM6YDL077C RSC30P38781 883 aa1.22□□□□□ -2.21
VAM6YDL077C RAD26P40352 1085 aa1.22□□□□□ -2.21
VAM6YDL077C MPH1P40562 993 aa1.22□□□□□ -2.21
VAM6YDL077C SAP185P40856 1058 aa1.22□□□□□ -2.21
VAM6YDL077C YPP1P46951 817 aa1.22□□□□□ -2.21
VAM6YDL077C HGH1P48362 394 aaKnown RBP1.22□□□□□ -2.21
VAM6YDL077C SHE4P51534 789 aa1.22□□□□□ -2.21
VAM6YDL077C PGA2P53903 129 aa1.22□□□□□ -2.21
VAM6YDL077C NCS2P53923 493 aaPredicted RBP1.22□□□□□ -2.21
VAM6YDL077C SLX4Q12098 748 aa1.22□□□□□ -2.21
VAM6YDL077C CFT2Q12102 859 aaPredicted RBP1.22□□□□□ -2.21
VAM6YDL077C TY1B-HO13535 1793 aa1.21□□□□□ -2.22
VAM6YDL077C TY1B-DR5P0C2I2 1755 aa1.21□□□□□ -2.22
VAM6YDL077C TY1B-DR6P0C2I3 1755 aa1.21□□□□□ -2.22
VAM6YDL077C TY1B-LR2P0C2I5 1755 aa1.21□□□□□ -2.22
VAM6YDL077C TY1B-LR3P0C2I6 1755 aaKnown RBP1.21□□□□□ -2.22
VAM6YDL077C TY1B-PR1P0C2I9 1755 aaKnown RBP1.21□□□□□ -2.22
VAM6YDL077C TY1B-PR2P0C2J0 1756 aa1.21□□□□□ -2.22
VAM6YDL077C TY1B-PR3P0C2J1 1755 aaKnown RBP1.21□□□□□ -2.22
VAM6YDL077C TY1B-JR1P47098 1755 aa1.21□□□□□ -2.22
VAM6YDL077C TY1B-ML2Q03434 1755 aaKnown RBP1.21□□□□□ -2.22
VAM6YDL077C TY1B-ER1Q03612 1755 aa1.21□□□□□ -2.22
VAM6YDL077C TY1B-ML1Q04711 1755 aaKnown RBP1.21□□□□□ -2.22
VAM6YDL077C TY1B-GR2Q12269 1755 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms