RNA–Protein interactions for RNA: YCR040W

MATALPHA1, Transcript of Transcriptional co-activator that regulates mating-type-specific genes, yeastyeast

Gene MATALPHA1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MATALPHA1YCR040W YBR184WP38299 523 aa6.91□□□□□ -1.3
MATALPHA1YCR040W CRP1P38845 465 aaKnown RBP6.91□□□□□ -1.3
MATALPHA1YCR040W PEX28P38848 579 aa6.91□□□□□ -1.3
MATALPHA1YCR040W GNP1P48813 663 aa6.91□□□□□ -1.3
MATALPHA1YCR040W RPL8BP29453 256 aaKnown RBP6.9□□□□□ -1.3
MATALPHA1YCR040W DAL1P32375 460 aa6.9□□□□□ -1.3
MATALPHA1YCR040W PBY1P38254 753 aa6.9□□□□□ -1.3
MATALPHA1YCR040W HUL4P40985 892 aa6.9□□□□□ -1.3
MATALPHA1YCR040W SIW14P53965 281 aa6.9□□□□□ -1.3
MATALPHA1YCR040W NOG1Q02892 647 aaKnown RBP6.9□□□□□ -1.3
MATALPHA1YCR040W RSC2Q06488 889 aa6.9□□□□□ -1.3
MATALPHA1YCR040W FMP25Q08023 583 aa6.9□□□□□ -1.3
MATALPHA1YCR040W TRP2P00899 507 aaKnown RBP6.89□□□□□ -1.31
MATALPHA1YCR040W PRP9P19736 530 aaKnown RBP6.89□□□□□ -1.31
MATALPHA1YCR040W APM2P38700 605 aa6.89□□□□□ -1.31
MATALPHA1YCR040W YGL140CP53120 1219 aa6.89□□□□□ -1.31
MATALPHA1YCR040W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
MATALPHA1YCR040W PSH1Q12161 406 aa6.89□□□□□ -1.31
MATALPHA1YCR040W CAN1P04817 590 aa6.88□□□□□ -1.31
MATALPHA1YCR040W SBP1P10080 294 aaKnown RBP6.88□□□□□ -1.31
MATALPHA1YCR040W RGP1P16664 663 aa6.88□□□□□ -1.31
MATALPHA1YCR040W MRC1P25588 1096 aa6.88□□□□□ -1.31
MATALPHA1YCR040W VRP1P37370 817 aa6.88□□□□□ -1.31
MATALPHA1YCR040W RIM11P38615 370 aa6.88□□□□□ -1.31
MATALPHA1YCR040W YEN1P40028 759 aa6.88□□□□□ -1.31
MATALPHA1YCR040W TPM2P40414 161 aa6.88□□□□□ -1.31
MATALPHA1YCR040W ARE1P25628 610 aa6.87□□□□□ -1.31
MATALPHA1YCR040W MSH2P25847 964 aa6.87□□□□□ -1.31
MATALPHA1YCR040W SFP1P32432 683 aa6.87□□□□□ -1.31
MATALPHA1YCR040W NAB2P32505 525 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
MATALPHA1YCR040W SLA1P32790 1244 aa6.87□□□□□ -1.31
MATALPHA1YCR040W STE5P32917 917 aa6.87□□□□□ -1.31
MATALPHA1YCR040W DUR3P33413 735 aa6.87□□□□□ -1.31
MATALPHA1YCR040W ITC1P53125 1264 aa6.87□□□□□ -1.31
MATALPHA1YCR040W HST3P53687 447 aa6.87□□□□□ -1.31
MATALPHA1YCR040W PEX13P80667 386 aa6.87□□□□□ -1.31
MATALPHA1YCR040W VPS72Q03388 795 aa6.87□□□□□ -1.31
MATALPHA1YCR040W EAF1Q06337 982 aa6.87□□□□□ -1.31
MATALPHA1YCR040W HDA2Q06629 674 aa6.87□□□□□ -1.31
MATALPHA1YCR040W MET32Q12041 191 aa6.87□□□□□ -1.31
MATALPHA1YCR040W CMR1Q12510 522 aaKnown RBP6.87□□□□□ -1.31
MATALPHA1YCR040W PRP5P21372 849 aaPredicted RBP6.86□□□□□ -1.31
MATALPHA1YCR040W BCK2P33306 851 aa6.86□□□□□ -1.31
MATALPHA1YCR040W VBA5P36172 582 aa6.86□□□□□ -1.31
MATALPHA1YCR040W NCL1P38205 684 aaKnown RBP6.86□□□□□ -1.31
MATALPHA1YCR040W YER156CP40093 338 aaKnown RBP6.86□□□□□ -1.31
MATALPHA1YCR040W UTP8P53276 713 aaKnown RBP6.86□□□□□ -1.31
MATALPHA1YCR040W ERR1P0CX10 437 aa6.85□□□□□ -1.31
MATALPHA1YCR040W ERR2P0CX11 437 aa6.85□□□□□ -1.31
MATALPHA1YCR040W FUS1P11710 512 aa6.85□□□□□ -1.31
MATALPHA1YCR040W AFT1P22149 690 aa6.85□□□□□ -1.31
MATALPHA1YCR040W VMA4P22203 233 aaKnown RBP6.85□□□□□ -1.31
MATALPHA1YCR040W NPR1P22211 790 aa6.85□□□□□ -1.31
MATALPHA1YCR040W AMS1P22855 1083 aa6.85□□□□□ -1.31
MATALPHA1YCR040W MSH3P25336 1018 aa6.85□□□□□ -1.31
MATALPHA1YCR040W GRX7P38068 203 aa6.85□□□□□ -1.31
MATALPHA1YCR040W PAF1P38351 445 aa6.85□□□□□ -1.31
MATALPHA1YCR040W GEM1P39722 662 aa6.85□□□□□ -1.31
MATALPHA1YCR040W UGO1Q03327 502 aa6.85□□□□□ -1.31
MATALPHA1YCR040W TY1A-DR3Q12441 440 aa6.85□□□□□ -1.31
MATALPHA1YCR040W SRF1Q12516 437 aa6.85□□□□□ -1.31
MATALPHA1YCR040W PIN4P34217 668 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
MATALPHA1YCR040W RER2P35196 286 aa6.84□□□□□ -1.31
MATALPHA1YCR040W SEA4P38164 1038 aa6.84□□□□□ -1.31
MATALPHA1YCR040W HXT13P39924 564 aa6.84□□□□□ -1.31
MATALPHA1YCR040W PFD1P46988 109 aa6.84□□□□□ -1.31
MATALPHA1YCR040W HXT17P53631 564 aa6.84□□□□□ -1.31
MATALPHA1YCR040W HXT15P54854 567 aa6.84□□□□□ -1.31
MATALPHA1YCR040W DNM1P54861 757 aa6.84□□□□□ -1.31
MATALPHA1YCR040W TAF8Q03750 510 aa6.84□□□□□ -1.31
MATALPHA1YCR040W YDL124WQ07551 312 aaKnown RBP6.84□□□□□ -1.31
MATALPHA1YCR040W YOL057WQ08225 711 aa6.84□□□□□ -1.31
MATALPHA1YCR040W RKM4Q12504 494 aa6.84□□□□□ -1.31
MATALPHA1YCR040W ADR1P07248 1323 aa6.83□□□□□ -1.32
MATALPHA1YCR040W CDC4P07834 779 aa6.83□□□□□ -1.32
MATALPHA1YCR040W ABD1P32783 436 aaPredicted RBP6.83□□□□□ -1.32
MATALPHA1YCR040W SWE1P32944 819 aa6.83□□□□□ -1.32
MATALPHA1YCR040W YKL077WP36081 392 aa6.83□□□□□ -1.32
MATALPHA1YCR040W UBP15P50101 1230 aa6.83□□□□□ -1.32
MATALPHA1YCR040W PPT1P53043 513 aa6.83□□□□□ -1.32
MATALPHA1YCR040W NTG2Q08214 380 aa6.83□□□□□ -1.32
MATALPHA1YCR040W RDH54P38086 958 aa6.82□□□□□ -1.32
MATALPHA1YCR040W MTR4P47047 1073 aaKnown RBP6.82□□□□□ -1.32
MATALPHA1YCR040W TPO2P53283 614 aa6.82□□□□□ -1.32
MATALPHA1YCR040W YNR029CP53729 429 aaKnown RBP6.82□□□□□ -1.32
MATALPHA1YCR040W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
MATALPHA1YCR040W NAB3P38996 802 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
MATALPHA1YCR040W PTK2P47116 818 aaKnown RBP6.81□□□□□ -1.32
MATALPHA1YCR040W LSC2P53312 427 aa6.81□□□□□ -1.32
MATALPHA1YCR040W RPL8AP17076 256 aaKnown RBP6.8□□□□□ -1.32
MATALPHA1YCR040W YKL107WP34251 309 aa6.8□□□□□ -1.32
MATALPHA1YCR040W ALR2P43553 858 aa6.8□□□□□ -1.32
MATALPHA1YCR040W YLR225CQ05948 407 aaKnown RBP6.8□□□□□ -1.32
MATALPHA1YCR040W GLO4Q12320 285 aa6.8□□□□□ -1.32
MATALPHA1YCR040W INO1P11986 533 aa6.79□□□□□ -1.32
MATALPHA1YCR040W SYP1P25623 870 aaKnown RBP6.79□□□□□ -1.32
MATALPHA1YCR040W DLD1P32891 587 aa6.79□□□□□ -1.32
MATALPHA1YCR040W PMT3P47190 753 aa6.79□□□□□ -1.32
MATALPHA1YCR040W ZDS1P50111 915 aaKnown RBP6.79□□□□□ -1.32
MATALPHA1YCR040W ROD1Q02805 837 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms