RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PEX6P33760 1030 aa6.47□□□□□ -1.37
PDB1YBR221C APE4P38821 490 aa6.47□□□□□ -1.37
PDB1YBR221C DOT6P40059 670 aaKnown RBP6.47□□□□□ -1.37
PDB1YBR221C DJP1P40564 432 aa6.47□□□□□ -1.37
PDB1YBR221C BFA1P47113 574 aa6.47□□□□□ -1.37
PDB1YBR221C TSR2Q06672 205 aaKnown RBP6.47□□□□□ -1.37
PDB1YBR221C CIT1P00890 479 aa6.46□□□□□ -1.38
PDB1YBR221C CDC31P06704 161 aaKnown RBP6.46□□□□□ -1.38
PDB1YBR221C MSH2P25847 964 aa6.46□□□□□ -1.38
PDB1YBR221C SFP1P32432 683 aa6.46□□□□□ -1.38
PDB1YBR221C RAD54P32863 898 aa6.46□□□□□ -1.38
PDB1YBR221C TAF8Q03750 510 aa6.46□□□□□ -1.38
PDB1YBR221C YOL036WQ08206 761 aa6.46□□□□□ -1.38
PDB1YBR221C APL5Q08951 932 aaKnown RBP6.46□□□□□ -1.38
PDB1YBR221C REC8Q12188 680 aa6.46□□□□□ -1.38
PDB1YBR221C PHO4P07270 312 aaKnown RBP6.45□□□□□ -1.38
PDB1YBR221C MSM1P22438 575 aa6.45□□□□□ -1.38
PDB1YBR221C SCJ1P25303 377 aa6.45□□□□□ -1.38
PDB1YBR221C PTH2P34222 208 aa6.45□□□□□ -1.38
PDB1YBR221C PEX5P35056 612 aa6.45□□□□□ -1.38
PDB1YBR221C ORC6P38826 435 aa6.45□□□□□ -1.38
PDB1YBR221C TGL3P40308 642 aa6.45□□□□□ -1.38
PDB1YBR221C RCF1Q03713 159 aa6.45□□□□□ -1.38
PDB1YBR221C IRC3Q06683 689 aa6.45□□□□□ -1.38
PDB1YBR221C PUN1Q06991 263 aa6.45□□□□□ -1.38
PDB1YBR221C RSF2P46974 1380 aa6.44□□□□□ -1.38
PDB1YBR221C RPL8AP17076 256 aaKnown RBP6.44□□□□□ -1.38
PDB1YBR221C KRR1P25586 316 aaPredicted RBP6.44□□□□□ -1.38
PDB1YBR221C TRZ1P36159 838 aaPredicted RBP6.44□□□□□ -1.38
PDB1YBR221C RPS26AP39938 119 aaKnown RBP6.44□□□□□ -1.38
PDB1YBR221C RPS26BP39939 119 aaKnown RBP6.44□□□□□ -1.38
PDB1YBR221C UBP9P39967 754 aa6.44□□□□□ -1.38
PDB1YBR221C NDE1P40215 560 aa6.44□□□□□ -1.38
PDB1YBR221C NAF1P53919 492 aaKnown RBP6.44□□□□□ -1.38
PDB1YBR221C SLM3Q12093 417 aa6.44□□□□□ -1.38
PDB1YBR221C ADE6P38972 1358 aaKnown RBP6.44□□□□□ -1.38
PDB1YBR221C COBP00163 385 aa6.43□□□□□ -1.38
PDB1YBR221C HOM3P10869 527 aa6.43□□□□□ -1.38
PDB1YBR221C RGR1P19263 1082 aa6.43□□□□□ -1.38
PDB1YBR221C PHO87P25360 923 aa6.43□□□□□ -1.38
PDB1YBR221C STE5P32917 917 aa6.43□□□□□ -1.38
PDB1YBR221C YKL133CP36066 463 aa6.43□□□□□ -1.38
PDB1YBR221C YKR075CP36155 307 aa6.43□□□□□ -1.38
PDB1YBR221C CAJ1P39101 391 aa6.43□□□□□ -1.38
PDB1YBR221C PEA2P40091 420 aa6.43□□□□□ -1.38
PDB1YBR221C GPP1P41277 250 aaKnown RBP6.43□□□□□ -1.38
PDB1YBR221C YJR120WP47157 116 aa6.43□□□□□ -1.38
PDB1YBR221C YGR237CP50089 785 aa6.43□□□□□ -1.38
PDB1YBR221C SPC105P53148 917 aa6.43□□□□□ -1.38
PDB1YBR221C RSC1P53236 928 aa6.43□□□□□ -1.38
PDB1YBR221C NST1P53935 1240 aa6.43□□□□□ -1.38
PDB1YBR221C YNL058CP53947 316 aa6.43□□□□□ -1.38
PDB1YBR221C HEL2Q05580 639 aaKnown RBP6.43□□□□□ -1.38
PDB1YBR221C TDA5Q06417 326 aaKnown RBP6.43□□□□□ -1.38
PDB1YBR221C RRP9Q06506 573 aaKnown RBP6.43□□□□□ -1.38
PDB1YBR221C CEX1Q12453 761 aa6.43□□□□□ -1.38
PDB1YBR221C SPT7P35177 1332 aa6.43□□□□□ -1.38
PDB1YBR221C TOM70P07213 617 aaKnown RBP6.42□□□□□ -1.38
PDB1YBR221C SST2P11972 698 aaKnown RBP6.42□□□□□ -1.38
PDB1YBR221C SIT4P20604 311 aa6.42□□□□□ -1.38
PDB1YBR221C MEF1P25039 761 aa6.42□□□□□ -1.38
PDB1YBR221C URA1P28272 314 aaPredicted RBP6.42□□□□□ -1.38
PDB1YBR221C VPH1P32563 840 aaKnown RBP6.42□□□□□ -1.38
PDB1YBR221C ABZ1P37254 787 aaPredicted RBP6.42□□□□□ -1.38
PDB1YBR221C VTC2P43585 828 aa6.42□□□□□ -1.38
PDB1YBR221C YMR1P47147 688 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
PDB1YBR221C SAM37P50110 327 aa6.42□□□□□ -1.38
PDB1YBR221C TRS120Q04183 1289 aa6.42□□□□□ -1.38
PDB1YBR221C VTI1Q04338 217 aa6.42□□□□□ -1.38
PDB1YBR221C PSR2Q07949 397 aa6.42□□□□□ -1.38
PDB1YBR221C CFT2Q12102 859 aaPredicted RBP6.42□□□□□ -1.38
PDB1YBR221C MCM16Q12262 181 aa6.42□□□□□ -1.38
PDB1YBR221C CDC60P26637 1090 aaKnown RBP6.41□□□□□ -1.38
PDB1YBR221C GCD6P32501 712 aaKnown RBP6.41□□□□□ -1.38
PDB1YBR221C YKL050CP35736 922 aa6.41□□□□□ -1.38
PDB1YBR221C BDF1P35817 686 aa6.41□□□□□ -1.38
PDB1YBR221C PCS60P38137 543 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
PDB1YBR221C RXT2P38255 430 aa6.41□□□□□ -1.38
PDB1YBR221C YHR020WP38708 688 aaKnown RBP6.41□□□□□ -1.38
PDB1YBR221C RSC30P38781 883 aa6.41□□□□□ -1.38
PDB1YBR221C YHR218WP38899 603 aa6.41□□□□□ -1.38
PDB1YBR221C SAP185P40856 1058 aa6.41□□□□□ -1.38
PDB1YBR221C SPR3P41901 512 aa6.41□□□□□ -1.38
PDB1YBR221C PMT3P47190 753 aa6.41□□□□□ -1.38
PDB1YBR221C HLJ1P48353 224 aa6.41□□□□□ -1.38
PDB1YBR221C YGR016WP53209 190 aa6.41□□□□□ -1.38
PDB1YBR221C HOL1P53389 586 aa6.41□□□□□ -1.38
PDB1YBR221C ERO1Q03103 563 aa6.41□□□□□ -1.38
PDB1YBR221C FLC1Q08967 793 aa6.41□□□□□ -1.38
PDB1YBR221C SGT2Q12118 346 aaKnown RBP6.41□□□□□ -1.38
PDB1YBR221C SMY2P32909 740 aaKnown RBP6.4□□□□□ -1.38
PDB1YBR221C ESL2P36168 1195 aa6.4□□□□□ -1.38
PDB1YBR221C STS1P38637 319 aa6.4□□□□□ -1.38
PDB1YBR221C RSP5P39940 809 aaKnown RBP6.4□□□□□ -1.38
PDB1YBR221C SPF1P39986 1215 aaKnown RBP6.4□□□□□ -1.38
PDB1YBR221C TYW3P53177 273 aa6.4□□□□□ -1.38
PDB1YBR221C BUL2Q03758 920 aaKnown RBP6.4□□□□□ -1.38
PDB1YBR221C NTG2Q08214 380 aa6.4□□□□□ -1.38
PDB1YBR221C CLF1Q12309 687 aaPredicted RBP6.4□□□□□ -1.38
PDB1YBR221C MSB4Q12317 492 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 641.3 ms