RNA–Protein interactions for RNA: ENST00000580974.5

PITPNC1-203, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITPNC1, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-203ENST00000580974 CASQ1P31415 396 aa18.61■□□□□ 0.57
PITPNC1-203ENST00000580974 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
PITPNC1-203ENST00000580974 PTPN14Q15678 1187 aa18.61■□□□□ 0.57
PITPNC1-203ENST00000580974 LARP1BQ659C4 914 aaKnown RBP18.61■□□□□ 0.57
PITPNC1-203ENST00000580974 STAMBPO95630 424 aa18.6■□□□□ 0.57
PITPNC1-203ENST00000580974 POLR3GO15318 223 aaPredicted RBP18.6■□□□□ 0.57
PITPNC1-203ENST00000580974 CARMIL2Q6F5E8 1435 aa18.6■□□□□ 0.57
PITPNC1-203ENST00000580974 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
PITPNC1-203ENST00000580974 GNAI3P08754 354 aa18.59■□□□□ 0.57
PITPNC1-203ENST00000580974 TRIM22Q8IYM9 498 aa18.59■□□□□ 0.57
PITPNC1-203ENST00000580974 GCC1Q96CN9 775 aa18.59■□□□□ 0.57
PITPNC1-203ENST00000580974 HMOX1P09601 288 aa18.59■□□□□ 0.57
PITPNC1-203ENST00000580974 MCM3P25205 808 aa18.59■□□□□ 0.57
PITPNC1-203ENST00000580974 EIF5P55010 431 aaKnown RBP18.59■□□□□ 0.57
PITPNC1-203ENST00000580974 MCM4P33991 863 aa18.58■□□□□ 0.57
PITPNC1-203ENST00000580974 GTF2F1P35269 517 aaKnown RBP eCLIP18.57■□□□□ 0.56
PITPNC1-203ENST00000580974 NOL7Q9UMY1 257 aaKnown RBP18.57■□□□□ 0.56
PITPNC1-203ENST00000580974 ZSCAN12O43309 604 aa18.57■□□□□ 0.56
PITPNC1-203ENST00000580974 NEBLO76041 1014 aa18.57■□□□□ 0.56
PITPNC1-203ENST00000580974 SMC1AQ14683 1233 aaKnown RBP18.57■□□□□ 0.56
PITPNC1-203ENST00000580974 CCDC69A6NI79 296 aa18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 SSR1P43307 286 aaKnown RBP18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 CFAP100Q494V2 611 aa18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 ERC1Q8IUD2 1116 aa18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 ZNF397Q8NF99 534 aaPredicted RBP18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 CCDC97Q96F63 343 aaPredicted RBP18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 C1orf115Q9H7X2 142 aa18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 IFFO1Q0D2I5 559 aa18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 TTC39AQ5SRH9 613 aa18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 KIF18AQ8NI77 898 aa18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 SPATA24Q86W54 205 aa18.56■□□□□ 0.56
PITPNC1-203ENST00000580974 SYCE3A1L190 88 aa18.55■□□□□ 0.56
PITPNC1-203ENST00000580974 DESP17661 470 aa18.55■□□□□ 0.56
PITPNC1-203ENST00000580974 PPM1EQ8WY54 764 aa18.55■□□□□ 0.56
PITPNC1-203ENST00000580974 ZHX1Q9UKY1 873 aaPredicted RBP18.55■□□□□ 0.56
PITPNC1-203ENST00000580974 KIF5CO60282 957 aa18.55■□□□□ 0.56
PITPNC1-203ENST00000580974 MAP3K11Q16584 847 aa18.55■□□□□ 0.56
PITPNC1-203ENST00000580974 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
PITPNC1-203ENST00000580974 URI1O94763 535 aaPredicted RBP18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 CCDC57Q2TAC2 916 aa18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 CIZ1Q9ULV3 898 aaPredicted RBP18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 VGFO15240 615 aaPredicted RBP18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 IMMTQ16891 758 aaKnown RBP18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 BACH2Q9BYV9 841 aa18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 GCOM1H8Y6P7 765 aaPredicted RBP18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 MYZAPP0CAP1 466 aa18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 SPA17Q15506 151 aa18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 GOPCQ9HD26 462 aa18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 UBE4AQ14139 1066 aa18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
PITPNC1-203ENST00000580974 SFPQP23246 707 aaKnown RBP eCLIP18.53■□□□□ 0.56
PITPNC1-203ENST00000580974 CCDC30Q5VVM6 783 aa18.53■□□□□ 0.56
PITPNC1-203ENST00000580974 BMP2KQ9NSY1 1161 aaPredicted RBP18.52■□□□□ 0.56
PITPNC1-203ENST00000580974 TNNT1P13805 278 aa18.52■□□□□ 0.56
PITPNC1-203ENST00000580974 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
PITPNC1-203ENST00000580974 CCDC175P0C221 793 aa18.52■□□□□ 0.55
PITPNC1-203ENST00000580974 CAMK4Q16566 473 aa18.52■□□□□ 0.55
PITPNC1-203ENST00000580974 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.52■□□□□ 0.55
PITPNC1-203ENST00000580974 KIF4BQ2VIQ3 1234 aa18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 CCDC158Q5M9N0 1113 aa18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 SOGA3Q5TF21 947 aa18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 LUZP1Q86V48 1076 aa18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 SSBP05455 408 aaKnown RBP eCLIP18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 NUP133Q8WUM0 1156 aa18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 PPP4R3BQ5MIZ7 849 aa18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 GNAI2P04899 355 aa18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 CCDC178Q5BJE1 867 aa18.51■□□□□ 0.55
PITPNC1-203ENST00000580974 MAP4K4O95819 1239 aaPredicted RBP18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 ZSCAN31Q96LW9 406 aaPredicted RBP18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 CETN2P41208 172 aa18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 RAI14Q9P0K7 980 aa18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 CDKL5O76039 1030 aa18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 GIGYF2Q6Y7W6 1299 aaKnown RBP18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
PITPNC1-203ENST00000580974 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
PITPNC1-203ENST00000580974 GTF2A1P52655 376 aaPredicted RBP18.49■□□□□ 0.55
PITPNC1-203ENST00000580974 ATP2B2Q01814 1243 aa18.49■□□□□ 0.55
PITPNC1-203ENST00000580974 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 ANAPC15P60006 121 aa18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 RAPGEF4Q8WZA2 1011 aa18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 MNAT1P51948 309 aa18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 CDCA7LQ96GN5 454 aa18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 NACAP1Q9BZK3 213 aa18.48■□□□□ 0.55
PITPNC1-203ENST00000580974 POTEJP0CG39 1038 aa18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 POTEB2H3BUK9 544 aa18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 CTR9Q6PD62 1173 aa18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 BLOC1S2Q6QNY1 142 aa18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 ADAMTS8Q9UP79 889 aa18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 MATR3P43243 847 aaKnown RBP eCLIP18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 LMAN1P49257 510 aa18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 PSME1Q06323 249 aa18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 DNAAF4Q8WXU2 420 aa18.47■□□□□ 0.55
PITPNC1-203ENST00000580974 PDE3AQ14432 1141 aa18.46■□□□□ 0.55
PITPNC1-203ENST00000580974 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
PITPNC1-203ENST00000580974 CLIP2Q9UDT6 1046 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms