RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-210ENST00000553693 CDK15Q96Q40 435 aa9.34□□□□□ -0.91
SCFD1-210ENST00000553693 MAGEB6P1A0A0J9YX57 407 aa9.33□□□□□ -0.92
SCFD1-210ENST00000553693 NR6A1Q15406 480 aa9.33□□□□□ -0.92
SCFD1-210ENST00000553693 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
SCFD1-210ENST00000553693 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
SCFD1-210ENST00000553693 SH3RF1Q7Z6J0 888 aa9.33□□□□□ -0.92
SCFD1-210ENST00000553693 KRT76Q01546 638 aa9.32□□□□□ -0.92
SCFD1-210ENST00000553693 NNTQ13423 1086 aa9.32□□□□□ -0.92
SCFD1-210ENST00000553693 ARID5BQ14865 1188 aa9.32□□□□□ -0.92
SCFD1-210ENST00000553693 PDXDC2PQ6P474 469 aa9.32□□□□□ -0.92
SCFD1-210ENST00000553693 PURBQ96QR8 312 aaKnown RBP9.32□□□□□ -0.92
SCFD1-210ENST00000553693 DNMT3AQ9Y6K1 912 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-210ENST00000553693 IGHA1P01876 353 aa9.31□□□□□ -0.92
SCFD1-210ENST00000553693 NR5A1Q13285 461 aa9.31□□□□□ -0.92
SCFD1-210ENST00000553693 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
SCFD1-210ENST00000553693 ARHGAP9Q9BRR9 750 aa9.31□□□□□ -0.92
SCFD1-210ENST00000553693 CARD14Q9BXL6 1004 aa9.31□□□□□ -0.92
SCFD1-210ENST00000553693 MAP4K5Q9Y4K4 846 aa9.31□□□□□ -0.92
SCFD1-210ENST00000553693 PPFIA3O75145 1194 aa9.3□□□□□ -0.92
SCFD1-210ENST00000553693 HMX1Q9NP08 348 aaPredicted RBP9.3□□□□□ -0.92
SCFD1-210ENST00000553693 GPSM3Q9Y4H4 160 aa9.3□□□□□ -0.92
SCFD1-210ENST00000553693 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-210ENST00000553693 PTK2Q05397 1052 aa9.29□□□□□ -0.92
SCFD1-210ENST00000553693 SCARF1Q14162 830 aa9.28□□□□□ -0.92
SCFD1-210ENST00000553693 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
SCFD1-210ENST00000553693 VASH1Q7L8A9 365 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-210ENST00000553693 CDV3Q9UKY7 258 aaKnown RBP9.28□□□□□ -0.92
SCFD1-210ENST00000553693 PRKCSHP14314 528 aaPredicted RBP9.27□□□□□ -0.93
SCFD1-210ENST00000553693 ZBTB33Q86T24 672 aa9.27□□□□□ -0.93
SCFD1-210ENST00000553693 SLC10A4Q96EP9 437 aa9.27□□□□□ -0.93
SCFD1-210ENST00000553693 KRTAP9-2Q9BYQ4 174 aa9.27□□□□□ -0.93
SCFD1-210ENST00000553693 FSHRP23945 695 aa9.26□□□□□ -0.93
SCFD1-210ENST00000553693 WDR4P57081 412 aaKnown RBP9.26□□□□□ -0.93
SCFD1-210ENST00000553693 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
SCFD1-210ENST00000553693 TIMP2P16035 220 aa9.25□□□□□ -0.93
SCFD1-210ENST00000553693 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
SCFD1-210ENST00000553693 EPS8L1Q8TE68 723 aa9.25□□□□□ -0.93
SCFD1-210ENST00000553693 APBB1O00213 710 aa9.24□□□□□ -0.93
SCFD1-210ENST00000553693 SOCS7O14512 581 aa9.24□□□□□ -0.93
SCFD1-210ENST00000553693 IRS1P35568 1242 aa9.24□□□□□ -0.93
SCFD1-210ENST00000553693 GRM5P41594 1212 aa9.24□□□□□ -0.93
SCFD1-210ENST00000553693 ZNF385CQ66K41 422 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-210ENST00000553693 TRIM34Q9BYJ4 488 aa9.24□□□□□ -0.93
SCFD1-210ENST00000553693 NR3C2P08235 984 aa9.23□□□□□ -0.93
SCFD1-210ENST00000553693 CNTNAP3BQ96NU0 1288 aa9.23□□□□□ -0.93
SCFD1-210ENST00000553693 KLF16Q9BXK1 252 aaPredicted RBP9.23□□□□□ -0.93
SCFD1-210ENST00000553693 CNTNAP3Q9BZ76 1288 aa9.23□□□□□ -0.93
SCFD1-210ENST00000553693 KRTAP9-6A0A140TA67 174 aa9.22□□□□□ -0.93
SCFD1-210ENST00000553693 ZIC2O95409 532 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-210ENST00000553693 EMILIN1Q9Y6C2 1016 aa9.22□□□□□ -0.93
SCFD1-210ENST00000553693 ADAM23O75077 832 aa9.21□□□□□ -0.94
SCFD1-210ENST00000553693 FOXK2Q01167 660 aa9.21□□□□□ -0.94
SCFD1-210ENST00000553693 NBPF20Q3BBV1 942 aa9.21□□□□□ -0.94
SCFD1-210ENST00000553693 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
SCFD1-210ENST00000553693 ADAM32Q8TC27 787 aa9.21□□□□□ -0.94
SCFD1-210ENST00000553693 MAN1A2O60476 641 aa9.2□□□□□ -0.94
SCFD1-210ENST00000553693 ITPKCQ96DU7 683 aa9.2□□□□□ -0.94
SCFD1-210ENST00000553693 GJD4Q96KN9 370 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-210ENST00000553693 KCTD15Q96SI1 283 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-210ENST00000553693 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
SCFD1-210ENST00000553693 ZFAND3Q9H8U3 227 aa9.2□□□□□ -0.94
SCFD1-210ENST00000553693 DHX9Q08211 1270 aaKnown RBP9.19□□□□□ -0.94
SCFD1-210ENST00000553693 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
SCFD1-210ENST00000553693 ARHGEF15O94989 841 aa9.18□□□□□ -0.94
SCFD1-210ENST00000553693 UPP2O95045 317 aa9.18□□□□□ -0.94
SCFD1-210ENST00000553693 DZIP3Q86Y13 1208 aaKnown RBP9.18□□□□□ -0.94
SCFD1-210ENST00000553693 WHAMMQ8TF30 809 aa9.18□□□□□ -0.94
SCFD1-210ENST00000553693 NDUFB9Q9Y6M9 179 aa9.18□□□□□ -0.94
SCFD1-210ENST00000553693 ZBBXA8MT70 800 aa9.17□□□□□ -0.94
SCFD1-210ENST00000553693 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
SCFD1-210ENST00000553693 KANK3Q6NY19 840 aa9.16□□□□□ -0.94
SCFD1-210ENST00000553693 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
SCFD1-210ENST00000553693 MTMR14Q8NCE2 650 aa9.16□□□□□ -0.94
SCFD1-210ENST00000553693 ZNF592Q92610 1267 aa9.16□□□□□ -0.94
SCFD1-210ENST00000553693 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-210ENST00000553693 SVOPQ8N4V2 548 aa9.15□□□□□ -0.94
SCFD1-210ENST00000553693 COL25A1Q9BXS0 654 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-210ENST00000553693 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
SCFD1-210ENST00000553693 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
SCFD1-210ENST00000553693 C6orf118Q5T5N4 469 aa9.14□□□□□ -0.95
SCFD1-210ENST00000553693 PRM3Q9NNZ6 103 aa9.14□□□□□ -0.95
SCFD1-210ENST00000553693 FBXO45P0C2W1 286 aa9.13□□□□□ -0.95
SCFD1-210ENST00000553693 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
SCFD1-210ENST00000553693 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
SCFD1-210ENST00000553693 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
SCFD1-210ENST00000553693 ZNF330Q9Y3S2 320 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-210ENST00000553693 BMP2P12643 396 aa9.12□□□□□ -0.95
SCFD1-210ENST00000553693 NR1H3Q13133 447 aa9.12□□□□□ -0.95
SCFD1-210ENST00000553693 TSEN34Q9BSV6 310 aaKnown RBP9.12□□□□□ -0.95
SCFD1-210ENST00000553693 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
SCFD1-210ENST00000553693 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
SCFD1-210ENST00000553693 SLURP2P0DP57 97 aa9.11□□□□□ -0.95
SCFD1-210ENST00000553693 SEPT12Q8IYM1 358 aa9.11□□□□□ -0.95
SCFD1-210ENST00000553693 ESPNB1AK53 854 aa9.1□□□□□ -0.95
SCFD1-210ENST00000553693 ITGB2P05107 769 aa9.1□□□□□ -0.95
SCFD1-210ENST00000553693 MCCD1P59942 119 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-210ENST00000553693 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
SCFD1-210ENST00000553693 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-210ENST00000553693 RAB15P59190 212 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms