RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 MTHFSP49914 203 aa23.2■■□□□ 1.3
ITGA5-213ENST00000553071 UNC5CLQ8IV45 518 aa23.2■■□□□ 1.3
ITGA5-213ENST00000553071 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
ITGA5-213ENST00000553071 USP21Q9UK80 565 aa23.2■■□□□ 1.3
ITGA5-213ENST00000553071 EMILIN1Q9Y6C2 1016 aa23.2■■□□□ 1.3
ITGA5-213ENST00000553071 AFF2P51816 1311 aa23.19■■□□□ 1.3
ITGA5-213ENST00000553071 PPP2R1AP30153 589 aa23.19■■□□□ 1.3
ITGA5-213ENST00000553071 CFAP53Q96M91 514 aa23.19■■□□□ 1.3
ITGA5-213ENST00000553071 COL14A1Q05707 1796 aaKnown RBP23.19■■□□□ 1.3
ITGA5-213ENST00000553071 MYBBP1AQ9BQG0 1328 aaKnown RBP23.18■■□□□ 1.3
ITGA5-213ENST00000553071 SLIT2O94813 1529 aa23.18■■□□□ 1.3
ITGA5-213ENST00000553071 INSRP06213 1382 aa23.17■■□□□ 1.3
ITGA5-213ENST00000553071 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
ITGA5-213ENST00000553071 AXIN2Q9Y2T1 843 aa23.17■■□□□ 1.3
ITGA5-213ENST00000553071 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
ITGA5-213ENST00000553071 CSB-PGBD3P0DP91 1061 aa23.15■■□□□ 1.3
ITGA5-213ENST00000553071 TRPC5Q9UL62 973 aaPredicted RBP23.15■■□□□ 1.3
ITGA5-213ENST00000553071 HSP90AB2PQ58FF8 381 aa23.14■■□□□ 1.29
ITGA5-213ENST00000553071 ANKRD24Q8TF21 1146 aa23.14■■□□□ 1.29
ITGA5-213ENST00000553071 STRN4Q9NRL3 753 aa23.14■■□□□ 1.29
ITGA5-213ENST00000553071 VPS72Q15906 364 aa23.13■■□□□ 1.29
ITGA5-213ENST00000553071 ERBB3P21860 1342 aa23.12■■□□□ 1.29
ITGA5-213ENST00000553071 WDR17Q8IZU2 1322 aa23.12■■□□□ 1.29
ITGA5-213ENST00000553071 MAP2P11137 1827 aaKnown RBP23.12■■□□□ 1.29
ITGA5-213ENST00000553071 CAMTA1Q9Y6Y1 1673 aa23.12■■□□□ 1.29
ITGA5-213ENST00000553071 BCL9LQ86UU0 1499 aa23.11■■□□□ 1.29
ITGA5-213ENST00000553071 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
ITGA5-213ENST00000553071 QTRT2Q9H974 415 aaKnown RBP23.11■■□□□ 1.29
ITGA5-213ENST00000553071 NWD2Q9ULI1 1742 aa23.11■■□□□ 1.29
ITGA5-213ENST00000553071 LTN1O94822 1766 aa23.1■■□□□ 1.29
ITGA5-213ENST00000553071 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
ITGA5-213ENST00000553071 LTV1Q96GA3 475 aaPredicted RBP23.1■■□□□ 1.29
ITGA5-213ENST00000553071 NUDCQ9Y266 331 aa23.1■■□□□ 1.29
ITGA5-213ENST00000553071 COL5A2P05997 1499 aaPredicted RBP23.1■■□□□ 1.29
ITGA5-213ENST00000553071 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
ITGA5-213ENST00000553071 CARD10Q9BWT7 1032 aa23.09■■□□□ 1.29
ITGA5-213ENST00000553071 CCDC9Q9Y3X0 531 aaKnown RBP23.09■■□□□ 1.29
ITGA5-213ENST00000553071 LMO7Q8WWI1 1683 aa23.09■■□□□ 1.29
ITGA5-213ENST00000553071 COL18A1P39060 1754 aa23.09■■□□□ 1.29
ITGA5-213ENST00000553071 NLRP2Q9NX02 1062 aa23.08■■□□□ 1.29
ITGA5-213ENST00000553071 THRAP3Q9Y2W1 955 aaKnown RBP23.08■■□□□ 1.29
ITGA5-213ENST00000553071 LARP1Q6PKG0 1096 aaKnown RBP23.07■■□□□ 1.28
ITGA5-213ENST00000553071 CRB1P82279 1406 aa23.07■■□□□ 1.28
ITGA5-213ENST00000553071 EIF4A2Q14240 407 aaKnown RBP23.06■■□□□ 1.28
ITGA5-213ENST00000553071 GJD4Q96KN9 370 aaPredicted RBP23.06■■□□□ 1.28
ITGA5-213ENST00000553071 SPATA31A5Q5VU36 1347 aa23.06■■□□□ 1.28
ITGA5-213ENST00000553071 SPATA31A7Q8IWB4 1347 aa23.06■■□□□ 1.28
ITGA5-213ENST00000553071 PLCH1Q4KWH8 1693 aa23.05■■□□□ 1.28
ITGA5-213ENST00000553071 IL13P35225 146 aa23.04■■□□□ 1.28
ITGA5-213ENST00000553071 RBM6P78332 1123 aaKnown RBP23.04■■□□□ 1.28
ITGA5-213ENST00000553071 TCP11L2Q8N4U5 519 aa23.04■■□□□ 1.28
ITGA5-213ENST00000553071 CDCA7Q9BWT1 371 aaPredicted RBP23.04■■□□□ 1.28
ITGA5-213ENST00000553071 ATRNO75882 1429 aa23.04■■□□□ 1.28
ITGA5-213ENST00000553071 SPATA31A1Q5TZJ5 1347 aa23.03■■□□□ 1.28
ITGA5-213ENST00000553071 RXRBP28702 533 aa23.02■■□□□ 1.28
ITGA5-213ENST00000553071 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.02■■□□□ 1.28
ITGA5-213ENST00000553071 PEAK1Q9H792 1746 aa23.02■■□□□ 1.28
ITGA5-213ENST00000553071 BARGINQ6ZT62 677 aa23.01■■□□□ 1.27
ITGA5-213ENST00000553071 RGS17Q9UGC6 210 aaPredicted RBP23.01■■□□□ 1.27
ITGA5-213ENST00000553071 NBPF6Q5VWK0 638 aa23■■□□□ 1.27
ITGA5-213ENST00000553071 NBPF4Q96M43 638 aa23■■□□□ 1.27
ITGA5-213ENST00000553071 EYA1Q99502 592 aa23■■□□□ 1.27
ITGA5-213ENST00000553071 USP35Q9P2H5 1018 aa23■■□□□ 1.27
ITGA5-213ENST00000553071 U2SURPO15042 1029 aaKnown RBP22.98■■□□□ 1.27
ITGA5-213ENST00000553071 PNNQ9H307 717 aaKnown RBP22.98■■□□□ 1.27
ITGA5-213ENST00000553071 NRAPQ86VF7 1730 aa22.98■■□□□ 1.27
ITGA5-213ENST00000553071 IGSF1Q8N6C5 1336 aa22.98■■□□□ 1.27
ITGA5-213ENST00000553071 ONECUT3O60422 494 aaPredicted RBP22.97■■□□□ 1.27
ITGA5-213ENST00000553071 RAPGEF4Q8WZA2 1011 aa22.97■■□□□ 1.27
ITGA5-213ENST00000553071 FAM208AQ9UK61 1670 aaKnown RBP22.97■■□□□ 1.27
ITGA5-213ENST00000553071 CCER2I3L3R5 266 aa22.96■■□□□ 1.27
ITGA5-213ENST00000553071 RGPD5Q99666 1765 aa22.96■■□□□ 1.27
ITGA5-213ENST00000553071 IL2RBP14784 551 aa22.95■■□□□ 1.26
ITGA5-213ENST00000553071 POTEAQ6S8J7 498 aa22.95■■□□□ 1.26
ITGA5-213ENST00000553071 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
ITGA5-213ENST00000553071 COL3A1P02461 1466 aaPredicted RBP22.94■■□□□ 1.26
ITGA5-213ENST00000553071 PLEKHG2Q9H7P9 1386 aa22.94■■□□□ 1.26
ITGA5-213ENST00000553071 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
ITGA5-213ENST00000553071 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
ITGA5-213ENST00000553071 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
ITGA5-213ENST00000553071 FCHSD2O94868 740 aa22.93■■□□□ 1.26
ITGA5-213ENST00000553071 TATP17735 454 aaPredicted RBP22.93■■□□□ 1.26
ITGA5-213ENST00000553071 FAM98CQ17RN3 349 aaKnown RBP22.93■■□□□ 1.26
ITGA5-213ENST00000553071 SULT6B1Q6IMI4 303 aa22.93■■□□□ 1.26
ITGA5-213ENST00000553071 NEFMP07197 916 aa22.91■■□□□ 1.26
ITGA5-213ENST00000553071 NCAPD2Q15021 1401 aa22.91■■□□□ 1.26
ITGA5-213ENST00000553071 KDRP35968 1356 aa22.9■■□□□ 1.26
ITGA5-213ENST00000553071 A0A0G2JS52 829 aa22.9■■□□□ 1.26
ITGA5-213ENST00000553071 EXOC5O00471 708 aa22.9■■□□□ 1.26
ITGA5-213ENST00000553071 MYT1Q01538 1121 aa22.9■■□□□ 1.26
ITGA5-213ENST00000553071 USHBP1Q8N6Y0 703 aa22.9■■□□□ 1.26
ITGA5-213ENST00000553071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.9■■□□□ 1.26
ITGA5-213ENST00000553071 AMOTQ4VCS5 1084 aa22.88■■□□□ 1.25
ITGA5-213ENST00000553071 MIER1Q8N108 512 aa22.88■■□□□ 1.25
ITGA5-213ENST00000553071 HMOX1P09601 288 aa22.87■■□□□ 1.25
ITGA5-213ENST00000553071 DDB1Q16531 1140 aa22.87■■□□□ 1.25
ITGA5-213ENST00000553071 PLEKHO1Q53GL0 409 aaPredicted RBP22.87■■□□□ 1.25
ITGA5-213ENST00000553071 SEPT12Q8IYM1 358 aa22.87■■□□□ 1.25
ITGA5-213ENST00000553071 SPG7Q9UQ90 795 aa22.87■■□□□ 1.25
ITGA5-213ENST00000553071 PDE3BQ13370 1112 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms