RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-206ENST00000534091 UPF1Q92900 1129 aaKnown RBP eCLIP13.6□□□□□ -0.23
LDLRAD3-206ENST00000534091 SPATA31A5Q5VU36 1347 aa13.6□□□□□ -0.23
LDLRAD3-206ENST00000534091 SPATA31A7Q8IWB4 1347 aa13.6□□□□□ -0.23
LDLRAD3-206ENST00000534091 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
LDLRAD3-206ENST00000534091 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
LDLRAD3-206ENST00000534091 NUTM2GQ5VZR2 741 aa13.59□□□□□ -0.23
LDLRAD3-206ENST00000534091 THRAP3Q9Y2W1 955 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-206ENST00000534091 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-206ENST00000534091 INSRP06213 1382 aa13.58□□□□□ -0.24
LDLRAD3-206ENST00000534091 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
LDLRAD3-206ENST00000534091 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
LDLRAD3-206ENST00000534091 SPATA31A1Q5TZJ5 1347 aa13.57□□□□□ -0.24
LDLRAD3-206ENST00000534091 CAMTA1Q9Y6Y1 1673 aa13.56□□□□□ -0.24
LDLRAD3-206ENST00000534091 EVA1CP58658 441 aa13.56□□□□□ -0.24
LDLRAD3-206ENST00000534091 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
LDLRAD3-206ENST00000534091 ARHGEF25Q86VW2 580 aa13.56□□□□□ -0.24
LDLRAD3-206ENST00000534091 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
LDLRAD3-206ENST00000534091 COL18A1P39060 1754 aa13.55□□□□□ -0.24
LDLRAD3-206ENST00000534091 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
LDLRAD3-206ENST00000534091 NFAT5O94916 1531 aa13.55□□□□□ -0.24
LDLRAD3-206ENST00000534091 PPP2R1AP30153 589 aa13.55□□□□□ -0.24
LDLRAD3-206ENST00000534091 CHRNA2Q15822 529 aa13.55□□□□□ -0.24
LDLRAD3-206ENST00000534091 YTHDC1Q96MU7 727 aaKnown RBP13.55□□□□□ -0.24
LDLRAD3-206ENST00000534091 THSD7AQ9UPZ6 1657 aa13.55□□□□□ -0.24
LDLRAD3-206ENST00000534091 BRWD3Q6RI45 1802 aa13.55□□□□□ -0.24
LDLRAD3-206ENST00000534091 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
LDLRAD3-206ENST00000534091 PNISRQ8TF01 805 aaKnown RBP13.54□□□□□ -0.24
LDLRAD3-206ENST00000534091 OVOS2A0A0J9YW53 1432 aa13.54□□□□□ -0.24
LDLRAD3-206ENST00000534091 OVOS2Q6IE36 1432 aa13.54□□□□□ -0.24
LDLRAD3-206ENST00000534091 CRB1P82279 1406 aa13.53□□□□□ -0.24
LDLRAD3-206ENST00000534091 CNGB1Q14028 1251 aaPredicted RBP13.52□□□□□ -0.25
LDLRAD3-206ENST00000534091 FAM98CQ17RN3 349 aaKnown RBP13.52□□□□□ -0.25
LDLRAD3-206ENST00000534091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
LDLRAD3-206ENST00000534091 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
LDLRAD3-206ENST00000534091 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.25
LDLRAD3-206ENST00000534091 STRN4Q9NRL3 753 aa13.52□□□□□ -0.25
LDLRAD3-206ENST00000534091 MAP2P11137 1827 aaKnown RBP13.52□□□□□ -0.25
LDLRAD3-206ENST00000534091 BLMP54132 1417 aaPredicted RBP13.51□□□□□ -0.25
LDLRAD3-206ENST00000534091 WDR17Q8IZU2 1322 aa13.51□□□□□ -0.25
LDLRAD3-206ENST00000534091 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
LDLRAD3-206ENST00000534091 NME9Q86XW9 330 aa13.51□□□□□ -0.25
LDLRAD3-206ENST00000534091 FYB1O15117 783 aa13.5□□□□□ -0.25
LDLRAD3-206ENST00000534091 COG3Q96JB2 828 aa13.5□□□□□ -0.25
LDLRAD3-206ENST00000534091 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
LDLRAD3-206ENST00000534091 LTN1O94822 1766 aa13.49□□□□□ -0.25
LDLRAD3-206ENST00000534091 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
LDLRAD3-206ENST00000534091 A0A0G2JS52 829 aa13.48□□□□□ -0.25
LDLRAD3-206ENST00000534091 MYT1Q01538 1121 aa13.48□□□□□ -0.25
LDLRAD3-206ENST00000534091 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
LDLRAD3-206ENST00000534091 CARD10Q9BWT7 1032 aa13.48□□□□□ -0.25
LDLRAD3-206ENST00000534091 RGPD5Q99666 1765 aa13.48□□□□□ -0.25
LDLRAD3-206ENST00000534091 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
LDLRAD3-206ENST00000534091 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
LDLRAD3-206ENST00000534091 AXIN2Q9Y2T1 843 aa13.47□□□□□ -0.25
LDLRAD3-206ENST00000534091 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
LDLRAD3-206ENST00000534091 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
LDLRAD3-206ENST00000534091 RTL1A6NKG5 1358 aa13.46□□□□□ -0.25
LDLRAD3-206ENST00000534091 FAM196AQ6ZSG2 479 aa13.46□□□□□ -0.25
LDLRAD3-206ENST00000534091 TOM1L2Q6ZVM7 507 aa13.46□□□□□ -0.25
LDLRAD3-206ENST00000534091 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.26
LDLRAD3-206ENST00000534091 ERBB3P21860 1342 aa13.45□□□□□ -0.26
LDLRAD3-206ENST00000534091 RGPD1P0DJD0 1748 aa13.45□□□□□ -0.26
LDLRAD3-206ENST00000534091 PDE3BQ13370 1112 aa13.45□□□□□ -0.26
LDLRAD3-206ENST00000534091 IP6K1Q92551 441 aa13.45□□□□□ -0.26
LDLRAD3-206ENST00000534091 GGNBP2Q9H3C7 697 aa13.45□□□□□ -0.26
LDLRAD3-206ENST00000534091 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
LDLRAD3-206ENST00000534091 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
LDLRAD3-206ENST00000534091 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
LDLRAD3-206ENST00000534091 ZBTB7CA1YPR0 619 aa13.44□□□□□ -0.26
LDLRAD3-206ENST00000534091 HNRNPUQ00839 825 aaKnown RBP eCLIP13.44□□□□□ -0.26
LDLRAD3-206ENST00000534091 DISP2A7MBM2 1401 aa13.43□□□□□ -0.26
LDLRAD3-206ENST00000534091 BCL9O00512 1426 aa13.43□□□□□ -0.26
LDLRAD3-206ENST00000534091 SOX12O15370 315 aa13.43□□□□□ -0.26
LDLRAD3-206ENST00000534091 CSB-PGBD3P0DP91 1061 aa13.43□□□□□ -0.26
LDLRAD3-206ENST00000534091 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
LDLRAD3-206ENST00000534091 BAG6P46379 1132 aa13.41□□□□□ -0.26
LDLRAD3-206ENST00000534091 MTHFSP49914 203 aa13.41□□□□□ -0.26
LDLRAD3-206ENST00000534091 DDB1Q16531 1140 aa13.41□□□□□ -0.26
LDLRAD3-206ENST00000534091 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
LDLRAD3-206ENST00000534091 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
LDLRAD3-206ENST00000534091 OVOS2A0A0G2JMS6 1433 aa13.4□□□□□ -0.26
LDLRAD3-206ENST00000534091 LRRC37A3O60309 1634 aa13.4□□□□□ -0.26
LDLRAD3-206ENST00000534091 AMPHP49418 695 aa13.4□□□□□ -0.26
LDLRAD3-206ENST00000534091 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
LDLRAD3-206ENST00000534091 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
LDLRAD3-206ENST00000534091 HOXC9P31274 260 aa13.39□□□□□ -0.27
LDLRAD3-206ENST00000534091 EP400Q96L91 3159 aa13.38□□□□□ -0.27
LDLRAD3-206ENST00000534091 FLT4P35916 1363 aa13.38□□□□□ -0.27
LDLRAD3-206ENST00000534091 EXOC5O00471 708 aa13.38□□□□□ -0.27
LDLRAD3-206ENST00000534091 TNNT2P45379 298 aaPredicted RBP13.38□□□□□ -0.27
LDLRAD3-206ENST00000534091 PEAK1Q9H792 1746 aa13.38□□□□□ -0.27
LDLRAD3-206ENST00000534091 TNS2Q63HR2 1409 aa13.38□□□□□ -0.27
LDLRAD3-206ENST00000534091 TNS1Q9HBL0 1735 aaKnown RBP13.37□□□□□ -0.27
LDLRAD3-206ENST00000534091 IL2RBP14784 551 aa13.37□□□□□ -0.27
LDLRAD3-206ENST00000534091 NLRP2Q9NX02 1062 aa13.37□□□□□ -0.27
LDLRAD3-206ENST00000534091 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
LDLRAD3-206ENST00000534091 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
LDLRAD3-206ENST00000534091 RGPD3A6NKT7 1758 aaPredicted RBP13.35□□□□□ -0.27
LDLRAD3-206ENST00000534091 RGPD4Q7Z3J3 1758 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms