RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 ARXQ96QS3 562 aa9.88□□□□□ -0.83
LINC00534-203ENST00000523406 GPSM3Q9Y4H4 160 aa9.88□□□□□ -0.83
LINC00534-203ENST00000523406 TTBK1Q5TCY1 1321 aaPredicted RBP9.87□□□□□ -0.83
LINC00534-203ENST00000523406 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
LINC00534-203ENST00000523406 OCSTAMPQ9BR26 566 aa9.87□□□□□ -0.83
LINC00534-203ENST00000523406 VPS8Q8N3P4 1428 aa9.87□□□□□ -0.83
LINC00534-203ENST00000523406 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
LINC00534-203ENST00000523406 CCDC97Q96F63 343 aaPredicted RBP9.86□□□□□ -0.83
LINC00534-203ENST00000523406 EIF4G2P78344 907 aaKnown RBP eCLIP9.85□□□□□ -0.83
LINC00534-203ENST00000523406 PTK2Q05397 1052 aa9.85□□□□□ -0.83
LINC00534-203ENST00000523406 ANKLE1Q8NAG6 615 aa9.85□□□□□ -0.83
LINC00534-203ENST00000523406 SH3BP5LQ7L8J4 393 aa9.84□□□□□ -0.83
LINC00534-203ENST00000523406 IFT140Q96RY7 1462 aa9.84□□□□□ -0.83
LINC00534-203ENST00000523406 CUL7Q14999 1698 aa9.83□□□□□ -0.84
LINC00534-203ENST00000523406 GGCXP38435 758 aa9.83□□□□□ -0.84
LINC00534-203ENST00000523406 PPP1R18Q6NYC8 613 aa9.83□□□□□ -0.84
LINC00534-203ENST00000523406 BAP1Q92560 729 aa9.83□□□□□ -0.84
LINC00534-203ENST00000523406 WDR62O43379 1518 aa9.82□□□□□ -0.84
LINC00534-203ENST00000523406 SEMA3FQ13275 785 aa9.82□□□□□ -0.84
LINC00534-203ENST00000523406 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
LINC00534-203ENST00000523406 IFFO2Q5TF58 517 aa9.82□□□□□ -0.84
LINC00534-203ENST00000523406 SH3RF1Q7Z6J0 888 aa9.82□□□□□ -0.84
LINC00534-203ENST00000523406 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.82□□□□□ -0.84
LINC00534-203ENST00000523406 WDR97A6NE52 1622 aa9.82□□□□□ -0.84
LINC00534-203ENST00000523406 TARBP1Q13395 1621 aaKnown RBP9.82□□□□□ -0.84
LINC00534-203ENST00000523406 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
LINC00534-203ENST00000523406 AQRO60306 1485 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC00534-203ENST00000523406 ZNF511Q8NB15 262 aa9.81□□□□□ -0.84
LINC00534-203ENST00000523406 ARHGAP9Q9BRR9 750 aa9.81□□□□□ -0.84
LINC00534-203ENST00000523406 ARAP1Q96P48 1450 aa9.8□□□□□ -0.84
LINC00534-203ENST00000523406 UCN2Q96RP3 112 aa9.8□□□□□ -0.84
LINC00534-203ENST00000523406 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
LINC00534-203ENST00000523406 HOMEZQ8IX15 550 aa9.79□□□□□ -0.84
LINC00534-203ENST00000523406 ADAM32Q8TC27 787 aa9.79□□□□□ -0.84
LINC00534-203ENST00000523406 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
LINC00534-203ENST00000523406 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
LINC00534-203ENST00000523406 SH3BP2P78314 561 aa9.78□□□□□ -0.84
LINC00534-203ENST00000523406 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
LINC00534-203ENST00000523406 FOXJ1Q92949 421 aa9.78□□□□□ -0.84
LINC00534-203ENST00000523406 FHAD1B1AJZ9 1412 aa9.78□□□□□ -0.84
LINC00534-203ENST00000523406 ZBTB24O43167 697 aaPredicted RBP9.77□□□□□ -0.85
LINC00534-203ENST00000523406 RPIAP49247 311 aa9.77□□□□□ -0.85
LINC00534-203ENST00000523406 MCCD1P59942 119 aaPredicted RBP9.77□□□□□ -0.85
LINC00534-203ENST00000523406 TRIM32Q13049 653 aa9.77□□□□□ -0.85
LINC00534-203ENST00000523406 BPHLQ86WA6 291 aaPredicted RBP9.77□□□□□ -0.85
LINC00534-203ENST00000523406 PPP1R12CQ9BZL4 782 aa9.77□□□□□ -0.85
LINC00534-203ENST00000523406 CFAP70Q5T0N1 1121 aa9.76□□□□□ -0.85
LINC00534-203ENST00000523406 ZBTB33Q86T24 672 aa9.76□□□□□ -0.85
LINC00534-203ENST00000523406 ZNF592Q92610 1267 aa9.76□□□□□ -0.85
LINC00534-203ENST00000523406 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
LINC00534-203ENST00000523406 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
LINC00534-203ENST00000523406 ERFEQ4G0M1 354 aa9.75□□□□□ -0.85
LINC00534-203ENST00000523406 C1QTNF2Q9BXJ5 285 aa9.75□□□□□ -0.85
LINC00534-203ENST00000523406 PCDHB9Q9Y5E1 797 aa9.75□□□□□ -0.85
LINC00534-203ENST00000523406 MAGEB6P1A0A0J9YX57 407 aa9.74□□□□□ -0.85
LINC00534-203ENST00000523406 WNT7BP56706 349 aa9.74□□□□□ -0.85
LINC00534-203ENST00000523406 SKOR1P84550 965 aa9.74□□□□□ -0.85
LINC00534-203ENST00000523406 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
LINC00534-203ENST00000523406 CARD14Q9BXL6 1004 aa9.74□□□□□ -0.85
LINC00534-203ENST00000523406 CEP126Q9P2H0 1117 aa9.74□□□□□ -0.85
LINC00534-203ENST00000523406 THOC2Q8NI27 1593 aaKnown RBP9.74□□□□□ -0.85
LINC00534-203ENST00000523406 AGERQ15109 404 aa9.73□□□□□ -0.85
LINC00534-203ENST00000523406 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
LINC00534-203ENST00000523406 TFIP11Q9UBB9 837 aaKnown RBP9.73□□□□□ -0.85
LINC00534-203ENST00000523406 EFCAB5A4FU69 1503 aa9.72□□□□□ -0.85
LINC00534-203ENST00000523406 PBRM1Q86U86 1689 aa9.72□□□□□ -0.85
LINC00534-203ENST00000523406 PIK3CDO00329 1044 aa9.72□□□□□ -0.85
LINC00534-203ENST00000523406 LIAT1Q6ZQX7 453 aa9.72□□□□□ -0.85
LINC00534-203ENST00000523406 PHTF2Q8N3S3 785 aa9.72□□□□□ -0.85
LINC00534-203ENST00000523406 NFATC2IPQ8NCF5 419 aa9.72□□□□□ -0.85
LINC00534-203ENST00000523406 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
LINC00534-203ENST00000523406 ATP9BO43861 1147 aa9.71□□□□□ -0.86
LINC00534-203ENST00000523406 ZEB1P37275 1124 aaPredicted RBP9.71□□□□□ -0.86
LINC00534-203ENST00000523406 SRPK2P78362 688 aaKnown RBP9.71□□□□□ -0.86
LINC00534-203ENST00000523406 DZIP3Q86Y13 1208 aaKnown RBP9.71□□□□□ -0.86
LINC00534-203ENST00000523406 TRMT44Q8IYL2 757 aaKnown RBP9.71□□□□□ -0.86
LINC00534-203ENST00000523406 FHOD3Q2V2M9 1422 aa9.71□□□□□ -0.86
LINC00534-203ENST00000523406 ADAMTS12P58397 1594 aa9.71□□□□□ -0.86
LINC00534-203ENST00000523406 PPP1R15AO75807 674 aaPredicted RBP9.7□□□□□ -0.86
LINC00534-203ENST00000523406 KANK4Q5T7N3 995 aaPredicted RBP9.7□□□□□ -0.86
LINC00534-203ENST00000523406 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
LINC00534-203ENST00000523406 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
LINC00534-203ENST00000523406 MAFBQ9Y5Q3 323 aaPredicted RBP9.7□□□□□ -0.86
LINC00534-203ENST00000523406 SNAPC4Q5SXM2 1469 aa9.7□□□□□ -0.86
LINC00534-203ENST00000523406 CTTNBP2Q8WZ74 1663 aa9.7□□□□□ -0.86
LINC00534-203ENST00000523406 CD2BP2O95400 341 aaKnown RBP9.69□□□□□ -0.86
LINC00534-203ENST00000523406 VARSP26640 1264 aaKnown RBP9.69□□□□□ -0.86
LINC00534-203ENST00000523406 CHIC2Q9UKJ5 165 aa9.69□□□□□ -0.86
LINC00534-203ENST00000523406 EIF4G3O43432 1585 aaKnown RBP9.68□□□□□ -0.86
LINC00534-203ENST00000523406 FMN1Q68DA7 1419 aa9.68□□□□□ -0.86
LINC00534-203ENST00000523406 RFX1P22670 979 aa9.68□□□□□ -0.86
LINC00534-203ENST00000523406 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
LINC00534-203ENST00000523406 PBXIP1Q96AQ6 731 aa9.68□□□□□ -0.86
LINC00534-203ENST00000523406 SLC10A4Q96EP9 437 aa9.68□□□□□ -0.86
LINC00534-203ENST00000523406 MAGI1Q96QZ7 1491 aaPredicted RBP9.67□□□□□ -0.86
LINC00534-203ENST00000523406 A0A0G2JS52 829 aa9.67□□□□□ -0.86
LINC00534-203ENST00000523406 SLFNL1Q499Z3 407 aa9.67□□□□□ -0.86
LINC00534-203ENST00000523406 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
LINC00534-203ENST00000523406 SKIP12755 728 aa9.66□□□□□ -0.86
LINC00534-203ENST00000523406 SLC19A1P41440 591 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms