RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 PNMA1Q8ND90 353 aa7.84□□□□□ -1.15
CSTF1-205ENST00000490539 ARMC2Q8NEN0 867 aa7.84□□□□□ -1.15
CSTF1-205ENST00000490539 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
CSTF1-205ENST00000490539 RFC5P40937 340 aa7.83□□□□□ -1.16
CSTF1-205ENST00000490539 WNT7BP56706 349 aa7.83□□□□□ -1.16
CSTF1-205ENST00000490539 HPS1Q92902 700 aa7.83□□□□□ -1.16
CSTF1-205ENST00000490539 UNC93B1Q9H1C4 597 aa7.83□□□□□ -1.16
CSTF1-205ENST00000490539 SOGA1O94964 1423 aa7.83□□□□□ -1.16
CSTF1-205ENST00000490539 CTDSPL2Q05D32 466 aa7.82□□□□□ -1.16
CSTF1-205ENST00000490539 KIF13AQ9H1H9 1805 aa7.82□□□□□ -1.16
CSTF1-205ENST00000490539 WRNQ14191 1432 aaPredicted RBP eCLIP7.81□□□□□ -1.16
CSTF1-205ENST00000490539 PER1O15534 1290 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-205ENST00000490539 PTCRAQ6ISU1 281 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-205ENST00000490539 ZSCAN1Q8NBB4 408 aa7.81□□□□□ -1.16
CSTF1-205ENST00000490539 POLA1P09884 1462 aaPredicted RBP7.81□□□□□ -1.16
CSTF1-205ENST00000490539 NXF1Q9UBU9 619 aaKnown RBP7.8□□□□□ -1.16
CSTF1-205ENST00000490539 FGD5Q6ZNL6 1462 aa7.8□□□□□ -1.16
CSTF1-205ENST00000490539 APBB1O00213 710 aa7.79□□□□□ -1.16
CSTF1-205ENST00000490539 F12P00748 615 aaPredicted RBP7.79□□□□□ -1.16
CSTF1-205ENST00000490539 NBPF14Q5TI25 921 aa7.79□□□□□ -1.16
CSTF1-205ENST00000490539 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
CSTF1-205ENST00000490539 CUX1P39880 1505 aa7.78□□□□□ -1.16
CSTF1-205ENST00000490539 CHD1O14646 1710 aa7.78□□□□□ -1.16
CSTF1-205ENST00000490539 GMPRP36959 345 aa7.78□□□□□ -1.16
CSTF1-205ENST00000490539 AGERQ15109 404 aa7.78□□□□□ -1.16
CSTF1-205ENST00000490539 EHBP1Q8NDI1 1231 aa7.78□□□□□ -1.16
CSTF1-205ENST00000490539 BAP1Q92560 729 aa7.78□□□□□ -1.16
CSTF1-205ENST00000490539 IRF7Q92985 503 aa7.78□□□□□ -1.16
CSTF1-205ENST00000490539 USP17L8P0C7I0 530 aa7.77□□□□□ -1.17
CSTF1-205ENST00000490539 RC3H1Q5TC82 1133 aaKnown RBP7.77□□□□□ -1.17
CSTF1-205ENST00000490539 NPAS3Q8IXF0 933 aa7.77□□□□□ -1.17
CSTF1-205ENST00000490539 ZNF511Q8NB15 262 aa7.77□□□□□ -1.17
CSTF1-205ENST00000490539 BANK1Q8NDB2 785 aa7.77□□□□□ -1.17
CSTF1-205ENST00000490539 GPKOWQ92917 476 aaPredicted RBP eCLIP7.77□□□□□ -1.17
CSTF1-205ENST00000490539 ZNF608Q9ULD9 1512 aaPredicted RBP7.77□□□□□ -1.17
CSTF1-205ENST00000490539 TDRD9Q8NDG6 1382 aaKnown RBP7.76□□□□□ -1.17
CSTF1-205ENST00000490539 LINC01559Q495D7 138 aa7.76□□□□□ -1.17
CSTF1-205ENST00000490539 BPHLQ86WA6 291 aaPredicted RBP7.76□□□□□ -1.17
CSTF1-205ENST00000490539 LRRN4Q8WUT4 740 aa7.76□□□□□ -1.17
CSTF1-205ENST00000490539 WDR97A6NE52 1622 aa7.76□□□□□ -1.17
CSTF1-205ENST00000490539 AQRO60306 1485 aaKnown RBP eCLIP7.75□□□□□ -1.173e-8■■■■■ 29
CSTF1-205ENST00000490539 RAD54L2Q9Y4B4 1467 aa7.75□□□□□ -1.17
CSTF1-205ENST00000490539 KDM6BO15054 1643 aa7.75□□□□□ -1.17
CSTF1-205ENST00000490539 TOP2BQ02880 1626 aa7.75□□□□□ -1.17
CSTF1-205ENST00000490539 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
CSTF1-205ENST00000490539 VARSP26640 1264 aaKnown RBP7.75□□□□□ -1.17
CSTF1-205ENST00000490539 SH3BP2P78314 561 aa7.75□□□□□ -1.17
CSTF1-205ENST00000490539 TMEM132AQ24JP5 1023 aa7.75□□□□□ -1.17
CSTF1-205ENST00000490539 CHMP7Q8WUX9 453 aaPredicted RBP7.75□□□□□ -1.17
CSTF1-205ENST00000490539 PRM3Q9NNZ6 103 aa7.75□□□□□ -1.17
CSTF1-205ENST00000490539 TARBP1Q13395 1621 aaKnown RBP7.74□□□□□ -1.17
CSTF1-205ENST00000490539 ALDH1A1P00352 501 aa7.74□□□□□ -1.17
CSTF1-205ENST00000490539 SKOR1P84550 965 aa7.74□□□□□ -1.17
CSTF1-205ENST00000490539 EIF4G3O43432 1585 aaKnown RBP7.74□□□□□ -1.17
CSTF1-205ENST00000490539 ZC3H4Q9UPT8 1303 aaKnown RBP7.74□□□□□ -1.17
CSTF1-205ENST00000490539 NR6A1Q15406 480 aa7.73□□□□□ -1.17
CSTF1-205ENST00000490539 FBXO31Q5XUX0 539 aaPredicted RBP7.73□□□□□ -1.17
CSTF1-205ENST00000490539 FAM174AQ8TBP5 190 aa7.73□□□□□ -1.17
CSTF1-205ENST00000490539 FKBPLQ9UIM3 349 aa7.73□□□□□ -1.17
CSTF1-205ENST00000490539 GRIN2BQ13224 1484 aa7.73□□□□□ -1.17
CSTF1-205ENST00000490539 GAPVD1Q14C86 1478 aa7.73□□□□□ -1.17
CSTF1-205ENST00000490539 ABCA10Q8WWZ4 1543 aa7.73□□□□□ -1.17
CSTF1-205ENST00000490539 BIVM-ERCC5R4GMW8 1640 aa7.72□□□□□ -1.17
CSTF1-205ENST00000490539 MAGI1Q96QZ7 1491 aaPredicted RBP7.71□□□□□ -1.18
CSTF1-205ENST00000490539 H3BM21 787 aa7.71□□□□□ -1.18
CSTF1-205ENST00000490539 BMP1P13497 986 aa7.71□□□□□ -1.18
CSTF1-205ENST00000490539 PTK2Q05397 1052 aa7.71□□□□□ -1.18
CSTF1-205ENST00000490539 PDXDC2PQ6P474 469 aa7.71□□□□□ -1.18
CSTF1-205ENST00000490539 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.18
CSTF1-205ENST00000490539 CLASP1Q7Z460 1538 aa7.71□□□□□ -1.18
CSTF1-205ENST00000490539 SYNJ1O43426 1573 aa7.71□□□□□ -1.18
CSTF1-205ENST00000490539 CAPN5O15484 640 aaPredicted RBP7.7□□□□□ -1.18
CSTF1-205ENST00000490539 VEGFBP49765 207 aa7.7□□□□□ -1.18
CSTF1-205ENST00000490539 TRIM46Q7Z4K8 759 aa7.7□□□□□ -1.18
CSTF1-205ENST00000490539 MAGEB6P1A0A0J9YX57 407 aa7.69□□□□□ -1.18
CSTF1-205ENST00000490539 ZBTB33Q86T24 672 aa7.69□□□□□ -1.18
CSTF1-205ENST00000490539 ARHGAP9Q9BRR9 750 aa7.69□□□□□ -1.18
CSTF1-205ENST00000490539 HMX1Q9NP08 348 aaPredicted RBP7.69□□□□□ -1.18
CSTF1-205ENST00000490539 GPSM3Q9Y4H4 160 aa7.69□□□□□ -1.18
CSTF1-205ENST00000490539 KIF27Q86VH2 1401 aa7.69□□□□□ -1.18
CSTF1-205ENST00000490539 SNAPC4Q5SXM2 1469 aa7.68□□□□□ -1.18
CSTF1-205ENST00000490539 FOXJ1Q92949 421 aa7.68□□□□□ -1.18
CSTF1-205ENST00000490539 ERBB4Q15303 1308 aa7.68□□□□□ -1.18
CSTF1-205ENST00000490539 ARID5BQ14865 1188 aa7.67□□□□□ -1.18
CSTF1-205ENST00000490539 SUZ12Q15022 739 aaKnown RBP7.67□□□□□ -1.18
CSTF1-205ENST00000490539 MPNDQ8N594 471 aa7.67□□□□□ -1.18
CSTF1-205ENST00000490539 NDUFB9Q9Y6M9 179 aa7.67□□□□□ -1.18
CSTF1-205ENST00000490539 SIAH2O43255 324 aa7.66□□□□□ -1.18
CSTF1-205ENST00000490539 SH3BP5LQ7L8J4 393 aa7.66□□□□□ -1.18
CSTF1-205ENST00000490539 ZNF592Q92610 1267 aa7.66□□□□□ -1.18
CSTF1-205ENST00000490539 CARD14Q9BXL6 1004 aa7.66□□□□□ -1.18
CSTF1-205ENST00000490539 CDV3Q9UKY7 258 aaKnown RBP7.66□□□□□ -1.18
CSTF1-205ENST00000490539 ZNF330Q9Y3S2 320 aaPredicted RBP7.66□□□□□ -1.18
CSTF1-205ENST00000490539 ERICH3Q5RHP9 1530 aa7.65□□□□□ -1.18
CSTF1-205ENST00000490539 SH3RF1Q7Z6J0 888 aa7.65□□□□□ -1.18
CSTF1-205ENST00000490539 PBRM1Q86U86 1689 aa7.65□□□□□ -1.18
CSTF1-205ENST00000490539 EPS8L1Q8TE68 723 aa7.65□□□□□ -1.18
CSTF1-205ENST00000490539 ABCA5Q8WWZ7 1642 aa7.65□□□□□ -1.18
CSTF1-205ENST00000490539 SLC10A4Q96EP9 437 aa7.65□□□□□ -1.18
CSTF1-205ENST00000490539 FHAD1B1AJZ9 1412 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms