RNA–Protein interactions for RNA: ENST00000468370.5

PRKD1-203, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 749 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-203ENST00000468370 PNMA3Q9UL41 463 aa8.7□□□□□ -1.02
PRKD1-203ENST00000468370 KTN1Q86UP2 1357 aaKnown RBP8.7□□□□□ -1.02
PRKD1-203ENST00000468370 PLCH2O75038 1416 aa8.7□□□□□ -1.02
PRKD1-203ENST00000468370 NEFLP07196 543 aa8.69□□□□□ -1.02
PRKD1-203ENST00000468370 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
PRKD1-203ENST00000468370 RTEL1-TNFRSF6BF6WH68 1400 aa8.69□□□□□ -1.02
PRKD1-203ENST00000468370 ERBINQ96RT1 1412 aa8.69□□□□□ -1.02
PRKD1-203ENST00000468370 PREX2Q70Z35 1606 aa8.69□□□□□ -1.02
PRKD1-203ENST00000468370 SNPHO15079 494 aa8.68□□□□□ -1.02
PRKD1-203ENST00000468370 USP46P62068 366 aa8.68□□□□□ -1.02
PRKD1-203ENST00000468370 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
PRKD1-203ENST00000468370 ERICH6BQ5W0A0 696 aa8.68□□□□□ -1.02
PRKD1-203ENST00000468370 HELBQ8NG08 1087 aaPredicted RBP8.68□□□□□ -1.02
PRKD1-203ENST00000468370 TSC1Q92574 1164 aa8.68□□□□□ -1.02
PRKD1-203ENST00000468370 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
PRKD1-203ENST00000468370 SPATA31E1Q6ZUB1 1445 aa8.68□□□□□ -1.02
PRKD1-203ENST00000468370 CNTLNQ9NXG0 1405 aa8.68□□□□□ -1.02
PRKD1-203ENST00000468370 PSDA5PKW4 1024 aaPredicted RBP8.67□□□□□ -1.02
PRKD1-203ENST00000468370 PPP1R3GB7ZBB8 358 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 KDM6BO15054 1643 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 FDX1P10109 184 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 COL9A1P20849 921 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 HNRNPMP52272 730 aaKnown RBP eCLIP8.67□□□□□ -1.02
PRKD1-203ENST00000468370 ARHGAP5Q13017 1502 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 CDC42BPAQ5VT25 1732 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 WASHC2AQ641Q2 1341 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 CLASP1Q7Z460 1538 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 GJD4Q96KN9 370 aaPredicted RBP8.67□□□□□ -1.02
PRKD1-203ENST00000468370 CCDC7Q96M83 1385 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 PPP1R12CQ9BZL4 782 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 LHX6Q9UPM6 363 aa8.67□□□□□ -1.02
PRKD1-203ENST00000468370 DUOX2Q9NRD8 1548 aa8.66□□□□□ -1.02
PRKD1-203ENST00000468370 ATP10AO60312 1499 aa8.66□□□□□ -1.02
PRKD1-203ENST00000468370 VAC14Q08AM6 782 aa8.66□□□□□ -1.02
PRKD1-203ENST00000468370 CFAP70Q5T0N1 1121 aa8.66□□□□□ -1.02
PRKD1-203ENST00000468370 PACS2Q86VP3 889 aa8.66□□□□□ -1.02
PRKD1-203ENST00000468370 ADAMTS19Q8TE59 1207 aa8.66□□□□□ -1.02
PRKD1-203ENST00000468370 TATDN2Q93075 761 aa8.66□□□□□ -1.02
PRKD1-203ENST00000468370 MYT1LQ9UL68 1186 aa8.66□□□□□ -1.02
PRKD1-203ENST00000468370 PLXNC1O60486 1568 aa8.65□□□□□ -1.02
PRKD1-203ENST00000468370 WDR7Q9Y4E6 1490 aa8.65□□□□□ -1.02
PRKD1-203ENST00000468370 RALGAPBQ86X10 1494 aa8.64□□□□□ -1.03
PRKD1-203ENST00000468370 CCDC144AA2RUR9 1427 aa8.64□□□□□ -1.03
PRKD1-203ENST00000468370 HOXA2O43364 376 aa8.64□□□□□ -1.03
PRKD1-203ENST00000468370 PTPREP23469 700 aa8.64□□□□□ -1.03
PRKD1-203ENST00000468370 LMOD1P29536 600 aaPredicted RBP8.64□□□□□ -1.03
PRKD1-203ENST00000468370 HMX1Q9NP08 348 aaPredicted RBP8.64□□□□□ -1.03
PRKD1-203ENST00000468370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.64□□□□□ -1.03
PRKD1-203ENST00000468370 CHD1O14646 1710 aa8.63□□□□□ -1.03
PRKD1-203ENST00000468370 WASHC2CQ9Y4E1 1318 aa8.63□□□□□ -1.03
PRKD1-203ENST00000468370 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
PRKD1-203ENST00000468370 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
PRKD1-203ENST00000468370 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
PRKD1-203ENST00000468370 IVNS1ABPQ9Y6Y0 642 aa8.63□□□□□ -1.03
PRKD1-203ENST00000468370 KANK1Q14678 1352 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 USP47Q96K76 1375 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 SAMD9LQ8IVG5 1584 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 E9PSI1 815 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 MTMR2Q13614 643 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 NBPF8Q3BBV2 869 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 ZNF428Q96B54 188 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 CARD11Q9BXL7 1154 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 PRKRIP1Q9H875 184 aaPredicted RBP8.62□□□□□ -1.03
PRKD1-203ENST00000468370 FAM135AQ9P2D6 1515 aa8.62□□□□□ -1.03
PRKD1-203ENST00000468370 SPAG9O60271 1321 aaKnown RBP8.61□□□□□ -1.03
PRKD1-203ENST00000468370 TRIM6-TRIM34B2RNG4 842 aa8.61□□□□□ -1.03
PRKD1-203ENST00000468370 SOX11P35716 441 aa8.61□□□□□ -1.03
PRKD1-203ENST00000468370 GCGRP47871 477 aa8.61□□□□□ -1.03
PRKD1-203ENST00000468370 TRIM34Q9BYJ4 488 aa8.61□□□□□ -1.03
PRKD1-203ENST00000468370 UNC13BO14795 1591 aa8.61□□□□□ -1.03
PRKD1-203ENST00000468370 MYO5CQ9NQX4 1742 aa8.6□□□□□ -1.03
PRKD1-203ENST00000468370 KIF7Q2M1P5 1343 aa8.6□□□□□ -1.03
PRKD1-203ENST00000468370 MAGI2Q86UL8 1455 aa8.6□□□□□ -1.03
PRKD1-203ENST00000468370 SEMA3FQ13275 785 aa8.6□□□□□ -1.03
PRKD1-203ENST00000468370 RALBP1Q15311 655 aa8.6□□□□□ -1.03
PRKD1-203ENST00000468370 CDCA8Q53HL2 280 aa8.6□□□□□ -1.03
PRKD1-203ENST00000468370 PNMA1Q8ND90 353 aa8.6□□□□□ -1.03
PRKD1-203ENST00000468370 HIRIP3Q9BW71 556 aaPredicted RBP8.6□□□□□ -1.03
PRKD1-203ENST00000468370 SUPT16HQ9Y5B9 1047 aaKnown RBP8.6□□□□□ -1.03
PRKD1-203ENST00000468370 GPRASP1Q5JY77 1395 aa8.6□□□□□ -1.03
PRKD1-203ENST00000468370 SYCP2Q9BX26 1530 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 CARNS1A5YM72 827 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 SMAPO00193 183 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 MYT1Q01538 1121 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 LRRN4Q8WUT4 740 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 KCNH8Q96L42 1107 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 ALG2Q9H553 416 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 VRTNQ9H8Y1 702 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 TFIP11Q9UBB9 837 aaKnown RBP8.59□□□□□ -1.03
PRKD1-203ENST00000468370 CDC42BPBQ9Y5S2 1711 aa8.59□□□□□ -1.03
PRKD1-203ENST00000468370 C6orf229H3BNL8 230 aa8.58□□□□□ -1.04
PRKD1-203ENST00000468370 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
PRKD1-203ENST00000468370 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
PRKD1-203ENST00000468370 B4GALNT3Q6L9W6 998 aa8.58□□□□□ -1.04
PRKD1-203ENST00000468370 DCAF11Q8TEB1 546 aa8.58□□□□□ -1.04
PRKD1-203ENST00000468370 FAM163AQ96GL9 167 aaPredicted RBP8.58□□□□□ -1.04
PRKD1-203ENST00000468370 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms