RNA–Protein interactions for RNA: ENST00000468370.5

PRKD1-203, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 749 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-203ENST00000468370 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
PRKD1-203ENST00000468370 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
PRKD1-203ENST00000468370 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
PRKD1-203ENST00000468370 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
PRKD1-203ENST00000468370 PLPPR3Q6T4P5 718 aa15.38■□□□□ 0.05
PRKD1-203ENST00000468370 FOXD1Q16676 465 aa14.71□□□□□ -0.05
PRKD1-203ENST00000468370 ADRA2BP18089 450 aa14.36□□□□□ -0.11
PRKD1-203ENST00000468370 PPP6R1Q9UPN7 881 aa14.3□□□□□ -0.12
PRKD1-203ENST00000468370 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
PRKD1-203ENST00000468370 KCNA4P22459 653 aa14.01□□□□□ -0.17
PRKD1-203ENST00000468370 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
PRKD1-203ENST00000468370 MSH5O43196 834 aa13.81□□□□□ -0.2
PRKD1-203ENST00000468370 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
PRKD1-203ENST00000468370 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
PRKD1-203ENST00000468370 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
PRKD1-203ENST00000468370 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
PRKD1-203ENST00000468370 NISCHQ9Y2I1 1504 aa13.33□□□□□ -0.28
PRKD1-203ENST00000468370 NPM3O75607 178 aaKnown RBP13.24□□□□□ -0.29
PRKD1-203ENST00000468370 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
PRKD1-203ENST00000468370 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
PRKD1-203ENST00000468370 ZBTB22O15209 634 aa12.88□□□□□ -0.35
PRKD1-203ENST00000468370 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
PRKD1-203ENST00000468370 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
PRKD1-203ENST00000468370 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
PRKD1-203ENST00000468370 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
PRKD1-203ENST00000468370 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
PRKD1-203ENST00000468370 DMRT2Q9Y5R5 561 aa12.66□□□□□ -0.38
PRKD1-203ENST00000468370 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
PRKD1-203ENST00000468370 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
PRKD1-203ENST00000468370 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
PRKD1-203ENST00000468370 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
PRKD1-203ENST00000468370 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
PRKD1-203ENST00000468370 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
PRKD1-203ENST00000468370 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
PRKD1-203ENST00000468370 FKBP8Q14318 412 aa12.2□□□□□ -0.46
PRKD1-203ENST00000468370 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
PRKD1-203ENST00000468370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.51
PRKD1-203ENST00000468370 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
PRKD1-203ENST00000468370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
PRKD1-203ENST00000468370 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
PRKD1-203ENST00000468370 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
PRKD1-203ENST00000468370 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
PRKD1-203ENST00000468370 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
PRKD1-203ENST00000468370 C1QBPQ07021 282 aaKnown RBP11.65□□□□□ -0.54
PRKD1-203ENST00000468370 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
PRKD1-203ENST00000468370 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
PRKD1-203ENST00000468370 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
PRKD1-203ENST00000468370 APLP2Q06481 763 aa11.56□□□□□ -0.56
PRKD1-203ENST00000468370 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
PRKD1-203ENST00000468370 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
PRKD1-203ENST00000468370 DCAF8L2P0C7V8 631 aa11.43□□□□□ -0.58
PRKD1-203ENST00000468370 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
PRKD1-203ENST00000468370 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
PRKD1-203ENST00000468370 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
PRKD1-203ENST00000468370 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
PRKD1-203ENST00000468370 PROM2Q8N271 834 aa11.34□□□□□ -0.59
PRKD1-203ENST00000468370 FBLN2P98095 1184 aa11.29□□□□□ -0.6
PRKD1-203ENST00000468370 BCANQ96GW7 911 aa11.29□□□□□ -0.6
PRKD1-203ENST00000468370 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.61
PRKD1-203ENST00000468370 TRHP20396 242 aaPredicted RBP11.25□□□□□ -0.61
PRKD1-203ENST00000468370 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
PRKD1-203ENST00000468370 POLA2Q14181 598 aa11.23□□□□□ -0.61
PRKD1-203ENST00000468370 CAPN15O75808 1086 aa11.22□□□□□ -0.61
PRKD1-203ENST00000468370 IFNLR1Q8IU57 520 aaPredicted RBP11.21□□□□□ -0.61
PRKD1-203ENST00000468370 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
PRKD1-203ENST00000468370 DCAF1Q9Y4B6 1507 aa11.14□□□□□ -0.63
PRKD1-203ENST00000468370 PKD2Q13563 968 aa11.13□□□□□ -0.63
PRKD1-203ENST00000468370 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
PRKD1-203ENST00000468370 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
PRKD1-203ENST00000468370 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
PRKD1-203ENST00000468370 ZBTB12Q9Y330 459 aaPredicted RBP11.1□□□□□ -0.63
PRKD1-203ENST00000468370 DSG3P32926 999 aa11.06□□□□□ -0.64
PRKD1-203ENST00000468370 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
PRKD1-203ENST00000468370 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
PRKD1-203ENST00000468370 ECM2O94769 699 aaPredicted RBP11.02□□□□□ -0.65
PRKD1-203ENST00000468370 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
PRKD1-203ENST00000468370 ABCB7O75027 752 aa11□□□□□ -0.65
PRKD1-203ENST00000468370 PAXIP1Q6ZW49 1069 aaPredicted RBP11□□□□□ -0.65
PRKD1-203ENST00000468370 CFAP44Q96MT7 982 aa10.99□□□□□ -0.65
PRKD1-203ENST00000468370 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
PRKD1-203ENST00000468370 MYO15BQ96JP2 1530 aa10.95□□□□□ -0.66
PRKD1-203ENST00000468370 KDM2AQ9Y2K7 1162 aa10.92□□□□□ -0.66
PRKD1-203ENST00000468370 SHROOM4Q9ULL8 1493 aa10.9□□□□□ -0.66
PRKD1-203ENST00000468370 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
PRKD1-203ENST00000468370 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
PRKD1-203ENST00000468370 ZNF692Q9BU19 519 aaPredicted RBP10.88□□□□□ -0.67
PRKD1-203ENST00000468370 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
PRKD1-203ENST00000468370 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
PRKD1-203ENST00000468370 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
PRKD1-203ENST00000468370 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
PRKD1-203ENST00000468370 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
PRKD1-203ENST00000468370 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
PRKD1-203ENST00000468370 RGL2O15211 777 aa10.83□□□□□ -0.68
PRKD1-203ENST00000468370 OSCARQ8IYS5 282 aa10.83□□□□□ -0.68
PRKD1-203ENST00000468370 MIER1Q8N108 512 aa10.78□□□□□ -0.68
PRKD1-203ENST00000468370 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
PRKD1-203ENST00000468370 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
PRKD1-203ENST00000468370 PABPN1Q86U42 306 aaKnown RBP eCLIP10.76□□□□□ -0.69
PRKD1-203ENST00000468370 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
PRKD1-203ENST00000468370 NBR1Q14596 966 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms