RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Ddx17Q501J6 650 aaKnown RBP13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 EspnQ9ET47 871 aa13.74□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Bcl11aQ9QYE3 773 aa13.73□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Iqcf3Q9D498 203 aa13.73□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 PaskQ8CEE6 1383 aa13.73□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Gnai1B2RSH2 354 aa13.72□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 ArxO35085 564 aa13.72□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Smc5Q8CG46 1101 aaKnown RBP13.72□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Gnai3Q9DC51 354 aa13.72□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Tnrc6bQ8BKI2 1810 aaKnown RBP13.72□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Prim1P20664 417 aa13.72□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Plekhm2Q80TQ5 1018 aa13.72□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Amer1Q7TS75 1132 aa13.72□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 ChgaP26339 463 aaKnown RBP13.71□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Slain2Q8CI08 581 aa13.71□□□□□ -0.21
Pcdh20-202ENSMUST00000192557 Vamp4O70480 141 aa13.71□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Tns3Q5SSZ5 1440 aa13.7□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Tnnt1O88346 262 aa13.7□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Rtf1A2AQ19 715 aaKnown RBP13.69□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Q3UPC7 1272 aa13.69□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Hoxc9P09633 260 aa13.69□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 TatQ8QZR1 454 aa13.69□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Znf335A2A5K6 1337 aa13.69□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Uhrf1bp1B2KF50 1429 aa13.69□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Amotl2Q8K371 772 aa13.68□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Znf521Q6KAS7 1311 aa13.68□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Nsd3Q6P2L6 1439 aa13.68□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Kif1aP33173 1695 aa13.68□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Cdk12Q14AX6 1484 aaKnown RBP13.68□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Fam135bQ9DAI6 1403 aa13.68□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Pnmal2G3X9N3 661 aa13.68□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Topaz1E5FYH1 1653 aa13.67□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Rtl5Q5DTT4 599 aa13.67□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Ccdc171E9Q1U1 1324 aa13.67□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Aifm3Q3TY86 605 aa13.67□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Arap3Q8R5G7 1538 aa13.67□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Dnajc10Q9DC23 793 aa13.66□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Bcl9Q9D219 1425 aa13.66□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 AU019823E9PUQ3 292 aa13.66□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 C3P01027 1663 aa13.66□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 CemipQ8BI06 1361 aa13.65□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 N4bp2F8VQG7 1678 aaKnown RBP13.65□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Ncbp3Q8BZR9 615 aaKnown RBP13.65□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Rims2Q9EQZ7 1530 aa13.65□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Parp14Q2EMV9 1817 aa13.65□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 Atp7bQ64446 1462 aa13.65□□□□□ -0.22
Pcdh20-202ENSMUST00000192557 KarsQ99MN1 595 aaKnown RBP13.65□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Kif20bQ80WE4 1774 aaKnown RBP13.64□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 D430041D05RikF6ZGR6 1678 aa13.64□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Pik3c2aQ61194 1686 aa13.64□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Ric3Q8BPM6 367 aa13.63□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Tmem2Q5FWI3 1383 aa13.63□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 TimelessQ9R1X4 1197 aa13.63□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Camta1A2A891 1682 aa13.62□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Aldh1l1Q8R0Y6 902 aa13.62□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 C5P06684 1680 aa13.62□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Med1Q925J9 1575 aa13.62□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Wdr17E9Q271 1322 aa13.62□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Dzip1Q8BMD2 852 aa13.62□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Farp2Q91VS8 1065 aa13.62□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Q3TQI7 289 aaKnown RBP13.61□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Atf3Q60765 181 aa13.61□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Cc2d1aQ8K1A6 943 aa13.61□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 CanxP35564 591 aaKnown RBP13.61□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Ak7Q9D2H2 614 aa13.61□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 HypkQ9CR41 129 aa13.6□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Ipo9Q91YE6 1041 aa13.6□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Als2Q920R0 1651 aa13.6□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Znf541Q0GGX2 1363 aa13.6□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Dixdc1Q80Y83 711 aa13.59□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Col16a1Q8BLX7 1580 aa13.59□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 NalcnQ8BXR5 1738 aa13.59□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Triml2E9PW10 424 aa13.58□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Gm10471E9Q1C7 252 aa13.58□□□□□ -0.23
Pcdh20-202ENSMUST00000192557 Sipa1l2Q80TE4 1722 aa13.58□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Spef2Q8C9J3 1734 aa13.58□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Gimap6Q8K349 305 aa13.58□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Fam83gQ5SWY7 812 aa13.58□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 MvpQ9EQK5 861 aa13.58□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Fmnl2A2APV2 1086 aa13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 PrkcshO08795 521 aa13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Rapgef3Q8VCC8 918 aa13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Alpk3Q924C5 1678 aa13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Ccdc183A2AJB1 534 aa13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Fgd1P52734 960 aa13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Ncapd2Q8K2Z4 1392 aa13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Hsp90ab1P11499 724 aaKnown RBP13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Bcl2l13P59017 434 aa13.57□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Map2P20357 1828 aa13.56□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Eif2s2Q99L45 331 aaKnown RBP13.56□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Gm21698A0A087WQP8 267 aa13.56□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Gm21671G3UY31 267 aa13.56□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Col14a1Q80X19 1797 aa13.56□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Sos1Q62245 1319 aa13.56□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Ankrd44B2RXR6 993 aa13.55□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Rimbp3Q3V0F0 1606 aa13.55□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Ubr1O70481 1757 aa13.55□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Sv2bQ8BG39 683 aa13.55□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Amigo3Q8C2S7 508 aa13.55□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Chpf2Q3UU43 768 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms