RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Vamp4O70480 141 aa35.37■■■■□ 3.25
Ldb1-208ENSMUST00000185355 CanxP35564 591 aaKnown RBP35.37■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Nsd3Q6P2L6 1439 aa35.37■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Map2P20357 1828 aa35.36■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Plekhm2Q80TQ5 1018 aa35.36■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Ak7Q9D2H2 614 aa35.36■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Mcm10Q0VBD2 885 aa35.35■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Stk31Q99MW1 1018 aa35.35■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Gm6268A2A3U9 297 aa35.34■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Zfp777B9EKF4 885 aa35.34■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Armcx1Q9CX83 456 aa35.34■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Aldh1l1Q8R0Y6 902 aa35.34■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Dnai1Q8C0M8 701 aa35.33■■■■□ 3.25
Ldb1-208ENSMUST00000185355 4930567H17RikQ3V0K5 233 aa35.32■■■■□ 3.24
Ldb1-208ENSMUST00000185355 Cavin2Q63918 418 aaKnown RBP35.3■■■■□ 3.24
Ldb1-208ENSMUST00000185355 Q3UPC7 1272 aa35.29■■■■□ 3.24
Ldb1-208ENSMUST00000185355 Znf330Q922H9 316 aa35.29■■■■□ 3.24
Ldb1-208ENSMUST00000185355 Slit2Q9R1B9 1521 aa35.29■■■■□ 3.24
Ldb1-208ENSMUST00000185355 GphnQ8BUV3 769 aaKnown RBP35.29■■■■□ 3.24
Ldb1-208ENSMUST00000185355 NgefQ8CHT1 710 aa35.29■■■■□ 3.24
Ldb1-208ENSMUST00000185355 Chmp4bQ9D8B3 224 aaKnown RBP35.28■■■■□ 3.24
Ldb1-208ENSMUST00000185355 Tmco5bQ80X59 307 aa35.26■■■■□ 3.24
Ldb1-208ENSMUST00000185355 KarsQ99MN1 595 aaKnown RBP35.26■■■■□ 3.24
Ldb1-208ENSMUST00000185355 Ecm2Q5FW85 670 aa35.26■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Usp16Q99LG0 825 aa35.26■■■■□ 3.23
Ldb1-208ENSMUST00000185355 MpripP97434 1024 aa35.25■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Ptpn23Q6PB44 1692 aa35.25■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Idi1P58044 227 aa35.25■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Cluap1Q8R3P7 413 aa35.23■■■■□ 3.23
Ldb1-208ENSMUST00000185355 MvpQ9EQK5 861 aa35.23■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Camta1A2A891 1682 aa35.23■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Parp14Q2EMV9 1817 aa35.22■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Phlpp2Q8BXA7 1320 aa35.22■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Hsp90ab1P11499 724 aaKnown RBP35.22■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Nectin2P32507 530 aa35.21■■■■□ 3.23
Ldb1-208ENSMUST00000185355 AU019823E9PUQ3 292 aa35.2■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Gm10563F6WIE4 79 aa35.2■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Dennd6aQ8BH65 605 aa35.2■■■■□ 3.23
Ldb1-208ENSMUST00000185355 Rangap1P46061 589 aaKnown RBP35.2■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Ap3b2Q9JME5 1082 aa35.2■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Rad17Q6NXW6 688 aa35.18■■■■□ 3.22
Ldb1-208ENSMUST00000185355 FancaQ9JL70 1439 aa35.18■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Sox12Q04890 314 aa35.18■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Nutm1Q8BHP2 1126 aa35.17■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Frmpd2A0A140LI67 1392 aa35.17■■■■□ 3.22
Ldb1-208ENSMUST00000185355 PtprvP70289 1705 aa35.17■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Ankrd44B2RXR6 993 aa35.17■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Map7O88735 730 aa35.17■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Scaf1Q5U4C3 1256 aaKnown RBP35.17■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Plin1Q8CGN5 517 aa35.17■■■■□ 3.22
Ldb1-208ENSMUST00000185355 U2surpQ6NV83 1029 aaKnown RBP35.16■■■■□ 3.22
Ldb1-208ENSMUST00000185355 MarsQ68FL6 902 aaKnown RBP35.15■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Nlgn1Q99K10 843 aa35.15■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Tet3Q8BG87 1668 aa35.14■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Trpm3Q5F4S9 1721 aa35.14■■■■□ 3.22
Ldb1-208ENSMUST00000185355 SkilQ60665 675 aa35.14■■■■□ 3.22
Ldb1-208ENSMUST00000185355 Mre11Q61216 706 aa35.13■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Adgrb1Q3UHD1 1582 aa35.12■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Sart3Q9JLI8 962 aaKnown RBP35.12■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Topaz1E5FYH1 1653 aa35.12■■■■□ 3.21
Ldb1-208ENSMUST00000185355 C3P01027 1663 aa35.12■■■■□ 3.21
Ldb1-208ENSMUST00000185355 TmpoQ61033 693 aaKnown RBP35.12■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Eif2s2Q99L45 331 aaKnown RBP35.12■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Wwc1Q5SXA9 1104 aa35.11■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Rimbp3Q3V0F0 1606 aa35.11■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Klhdc4Q921I2 584 aa35.09■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Gm21190A0A0G2JGJ6 266 aa35.09■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Ppp1r9bQ6R891 817 aaKnown RBP35.09■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Cabp4Q8VHC5 271 aa35.09■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Tmem94Q7TSH8 1360 aa35.08■■■■□ 3.21
Ldb1-208ENSMUST00000185355 Tbc1d32Q3URV1 1296 aa35.07■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Col14a1Q80X19 1797 aa35.05■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Pnmal2G3X9N3 661 aa35.05■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Rab11fip3Q8CHD8 1047 aa35.04■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Senp3Q9EP97 568 aaKnown RBP35.02■■■■□ 3.2
Ldb1-208ENSMUST00000185355 MyclP10166 368 aa35.02■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Ric3Q8BPM6 367 aa35.02■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Thsd7aQ69ZU6 1645 aa35.02■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Brd1E9PZ26 1189 aaKnown RBP35.01■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Eya1P97767 591 aa35.01■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Kif18aQ91WD7 886 aa35.01■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Unc13bQ9Z1N9 1602 aa35.01■■■■□ 3.2
Ldb1-208ENSMUST00000185355 Chl1P70232 1209 aa35.01■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Kif24Q6NWW5 1356 aa35■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Rtf1A2AQ19 715 aaKnown RBP34.99■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Ano8Q6PB70 1060 aa34.99■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Aldh1l2Q8K009 923 aa34.99■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Nckap5lQ6GQX2 1323 aa34.99■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Cetn4Q8K4K1 168 aa34.99■■■■□ 3.19
Ldb1-208ENSMUST00000185355 KnstrnQ9D9Z1 312 aaKnown RBP34.98■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Tns3Q5SSZ5 1440 aa34.97■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Hoxc9P09633 260 aa34.96■■■■□ 3.19
Ldb1-208ENSMUST00000185355 LifrP42703 1092 aa34.96■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Rabep1O35551 862 aa34.96■■■■□ 3.19
Ldb1-208ENSMUST00000185355 Sipa1l2Q80TE4 1722 aa34.94■■■■□ 3.18
Ldb1-208ENSMUST00000185355 Arfgef2A2A5R2 1792 aa34.94■■■■□ 3.18
Ldb1-208ENSMUST00000185355 Ccne1Q61457 408 aa34.93■■■■□ 3.18
Ldb1-208ENSMUST00000185355 HnrnpuQ8VEK3 800 aaKnown RBP34.93■■■■□ 3.18
Ldb1-208ENSMUST00000185355 Tmem2Q5FWI3 1383 aa34.92■■■■□ 3.18
Ldb1-208ENSMUST00000185355 Sptbn5F6UCX4 1208 aa34.91■■■■□ 3.18
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms