RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 Rgl3Q3UYI5 709 aa13.16□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Cep152A2AUM9 1736 aaKnown RBP13.16□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Adamts13Q769J6 1426 aa13.15□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Pak3Q61036 559 aa13.15□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 RgmbQ7TQ33 436 aa13.15□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Afg3l2Q8JZQ2 802 aaKnown RBP13.15□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Cdk5rap2Q8K389 1822 aa13.14□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Magea6O89010 325 aa13.14□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Magea3Q6T340 320 aa13.14□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Emilin1Q99K41 1017 aa13.14□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Kcnn1Q9EQR3 537 aa13.14□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 TonslQ6NZL6 1363 aa13.14□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Akap11E9Q777 1895 aa13.14□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Idi2Q8BFZ6 227 aa13.13□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Mst1rQ62190 1378 aa13.12□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Hmgb2P30681 210 aaKnown RBP13.12□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Sik1Q60670 779 aa13.12□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Kcna4Q61423 654 aa13.12□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Mtfr1lQ9CWE0 289 aa13.12□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Gsto1O09131 240 aa13.11□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Fam198bQ3UPI1 517 aa13.11□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Kcnh5Q920E3 988 aa13.11□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Dnajc10Q9DC23 793 aa13.11□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Usp21Q9QZL6 566 aa13.11□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Gm21190A0A0G2JGJ6 266 aa13.1□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Cpsf1Q9EPU4 1441 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Mrps5Q99N87 432 aaKnown RBP13.09□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Pcgf6Q99NA9 353 aa13.09□□□□□ -0.31
Ccdc28a-205ENSMUST00000174592 Fmnl2A2APV2 1086 aa13.08□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Adgre1Q61549 931 aa13.08□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Pnpla7A2AJ88 1352 aa13.07□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 TnrQ8BYI9 1358 aa13.07□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Gm16486A0A1D5RMD1 1434 aa13.07□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Zpr1Q62384 459 aa13.07□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Nol11Q8BJW5 723 aaKnown RBP13.07□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Chrna2Q91X60 512 aa13.07□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 NktrP30415 1453 aa13.07□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 CenpjQ569L8 1344 aa13.07□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 RalgapbQ8BQZ4 1484 aa13.06□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Las1lA2BE28 776 aaKnown RBP13.06□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 ErfeQ6PGN1 340 aa13.06□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 TatQ8QZR1 454 aa13.06□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Ptpn23Q6PB44 1692 aa13.05□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Plekhd1B2RPU2 505 aa13.05□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Znf335A2A5K6 1337 aa13.05□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Gtf2e1Q9D0D5 440 aa13.04□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Exosc9Q9JHI7 438 aaKnown RBP13.04□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Map3k19E9Q3S4 1311 aa13.04□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Dennd6aQ8BH65 605 aa13.03□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Podxl2Q8CAE9 603 aa13.03□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Spon1Q8VCC9 807 aa13.03□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Rnaseh2aQ9CWY8 301 aa13.03□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 FanciQ8K368 1330 aa13.03□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Sipa1l1Q8C0T5 1782 aa13.02□□□□□ -0.32
Ccdc28a-205ENSMUST00000174592 Kcnh4A2A5F7 1018 aa13.02□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Cabp4Q8VHC5 271 aa13.02□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Sos2Q02384 1333 aa13.02□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Ccer2J3QPU5 274 aa13.01□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 CrklP47941 303 aa13.01□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 OptnQ8K3K8 584 aa13.01□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Znrd1-asQ8R0E5 213 aa13.01□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Nlgn1Q99K10 843 aa13.01□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Usp47Q8BY87 1376 aa13.01□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Smg6P61406 1418 aaKnown RBP13.01□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 FancaQ9JL70 1439 aa13□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Jdp2P97875 163 aa13□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Supt5hO55201 1082 aaKnown RBP12.98□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Senp3Q9EP97 568 aaKnown RBP12.98□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Nphp4P59240 1425 aa12.97□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Kif16bB1AVY7 1312 aa12.97□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Elp1Q7TT37 1333 aaKnown RBP12.97□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Kiaa0319lQ8K135 1048 aa12.97□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 SnrkQ8VDU5 748 aa12.97□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 MeiocA2AG06 965 aa12.96□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Zranb3Q6NZP1 1069 aa12.96□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Stard8Q8K031 1019 aa12.96□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 Cc2d1aQ8K1A6 943 aa12.96□□□□□ -0.33
Ccdc28a-205ENSMUST00000174592 UtrnE9Q6R7 3430 aa12.95□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Rps6ka4Q9Z2B9 773 aa12.95□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Slit1Q80TR4 1531 aa12.94□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Zbtb4Q5F293 982 aa12.94□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 VwdeQ6DFV8 926 aa12.94□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Msl1Q6PDM1 616 aa12.94□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Zswim8Q3UHH1 1832 aaKnown RBP12.93□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 NppbP40753 121 aa12.93□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Col23a1Q8K4G2 532 aa12.93□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Igsf1Q7TQA1 1317 aa12.92□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Gtpbp6Q3U6U5 514 aa12.92□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Cyp2c69E9PXC3 491 aa12.91□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Cyp2c40P56657 491 aa12.91□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 ArsiQ32KI9 573 aa12.91□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Prom2Q3UUY6 835 aa12.91□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Ano8Q6PB70 1060 aa12.91□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Arfgef2A2A5R2 1792 aa12.91□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Tmem132eQ6IEE6 982 aa12.9□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 TkfcQ8VC30 578 aa12.9□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Srcin1Q9QWI6 1250 aa12.9□□□□□ -0.34
Ccdc28a-205ENSMUST00000174592 Tmf1B9EKI3 1091 aa12.89□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Klc3Q91W40 508 aa12.89□□□□□ -0.35
Ccdc28a-205ENSMUST00000174592 Itgb4A2A863 1818 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms