RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Bcl11bQ99PV8 884 aa10.91□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Lmbr1Q9JIT0 490 aa10.91□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Pdia4P08003 638 aaKnown RBP10.91□□□□□ -0.66
Col6a5-201ENSMUST00000165165 DesP31001 469 aaKnown RBP10.91□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Tnpo1Q8BFY9 898 aaKnown RBP10.91□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Cc2d1bQ8BRN9 848 aa10.91□□□□□ -0.66
Col6a5-201ENSMUST00000165165 RalylQ8BTF8 293 aa10.91□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Plekhd1B2RPU2 505 aa10.9□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Nectin2P32507 530 aa10.9□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Nutm1Q8BHP2 1126 aa10.9□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Syap1Q9D5V6 365 aa10.9□□□□□ -0.66
Col6a5-201ENSMUST00000165165 Gm21190A0A0G2JGJ6 266 aa10.9□□□□□ -0.66
Col6a5-201ENSMUST00000165165 LarsQ8BMJ2 1178 aa10.9□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Cfap65Q3V0B4 1847 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Zscan20B2KFW1 1030 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Iqca1Q9CUL5 857 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Q9D9S1 216 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ppp2r3aB2RXC8 1150 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Zkscan2G3X952 960 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Prl7d1P04769 244 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gse1Q3U3C9 1213 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Cdr1E9Q0B4 517 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Zfp42P22227 288 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Aebp1Q640N1 1128 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 ZfxP17012 799 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ctnna2Q61301 953 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Zpr1Q62384 459 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 SkilQ60665 675 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Lman1Q9D0F3 517 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Zeb2Q9R0G7 1215 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Lemd3Q9WU40 921 aa10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Nop53Q8BK35 484 aaKnown RBP10.89□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gnl3lQ6PGG6 577 aaKnown RBP10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Sh3d21Q7TSG5 549 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Rpap1Q80TE0 1409 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Hsf2bpQ9D4G2 338 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gm21671G3UY31 267 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Bcl2l13P59017 434 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Camk4P08414 469 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ctage5Q8R311 779 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Znf710Q3U288 666 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Samm50Q8BGH2 469 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ccdc73Q8CDM4 1066 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Galntl5Q9D4M9 431 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Cdkl5Q3UTQ8 938 aa10.88□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Dact3Q0PHV7 610 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Hspa4Q61316 841 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Nup88Q8CEC0 753 aaKnown RBP10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Tsg101Q61187 391 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Znf131Q8K3J5 619 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Pank1Q8K4K6 548 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Tmco5aQ9D9D5 303 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Tubb6Q922F4 447 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gm21680A0A0G2JGR8 267 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gbp1Q01514 589 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Cdc45Q9Z1X9 566 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ncbp1Q3UYV9 790 aaKnown RBP10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Noc2lQ9WV70 747 aaKnown RBP10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Arid3cA6PWV5 409 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Rfc1P35601 1131 aa10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Naa15Q80UM3 865 aaKnown RBP10.87□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Nap1l5Q9JJF0 156 aa10.86□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ankrd24Q80VM7 985 aa10.86□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Rufy2Q8R4C2 606 aa10.86□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ccdc88bQ4QRL3 1481 aa10.86□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Fermt2Q8CIB5 680 aa10.86□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Crybg2B7ZCC2 1516 aa10.86□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Rnf216P58283 853 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Mcm2P97310 904 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Olr1Q9EQ09 363 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 MvpQ9EQK5 861 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Nfxl1E9Q8I7 918 aaKnown RBP10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gbp8Q2V6D6 525 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Inpp5dQ9ES52 1191 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gnai1B2RSH2 354 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ccdc6D3YZP9 469 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Psmc4P54775 418 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gnai3Q9DC51 354 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Fyb1O35601 819 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Arl1P61211 181 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Soga3Q6NZL0 945 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Fam177a1Q8BR63 207 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Fam184aE9PW83 1143 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 NcapgE9PWG6 1004 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Tex35Q14BK3 207 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Kif3bQ61771 747 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Trap1aP19473 224 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Vps37dQ810I0 261 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gle1Q8R322 699 aa10.85□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Fsd1Q7TPM6 496 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Cetn1P41209 172 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Nbr1P97432 988 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Smg7Q5RJH6 1138 aaKnown RBP10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ccdc172Q810N9 267 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Gigyf1Q99MR1 1044 aaKnown RBP10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ttll5Q8CHB8 1328 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Cacna2d4Q5RJF7 1116 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Nup133Q8R0G9 1155 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Specc1Q5SXY1 1067 aa10.84□□□□□ -0.67
Col6a5-201ENSMUST00000165165 Ccdc178Q8CDV0 866 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 76.9 ms