RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Gm21663A0A0G2JE01 267 aa13□□□□□ -0.33
Clip1-204ENSMUST00000111564 Gm7361D3Z6R1 267 aa13□□□□□ -0.33
Clip1-204ENSMUST00000111564 5031410I06RikE9Q4E0 267 aa13□□□□□ -0.33
Clip1-204ENSMUST00000111564 Gm1979E9QAN3 267 aa13□□□□□ -0.33
Clip1-204ENSMUST00000111564 Gm5862K7N5V5 267 aa13□□□□□ -0.33
Clip1-204ENSMUST00000111564 Gm10220K7N660 267 aa13□□□□□ -0.33
Clip1-204ENSMUST00000111564 Trim58Q5NCC9 485 aa12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 PsapQ61207 557 aaKnown RBP12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Afap1Q80YS6 731 aa12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Supt6hQ62383 1726 aaKnown RBP12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Washc2Q6PGL7 1334 aa12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Trim34bJ3QNR8 485 aa12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Rbm25B2RY56 838 aaKnown RBP12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Smc2Q8CG48 1191 aaKnown RBP12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Cchcr1Q8K2I2 770 aa12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Usp54Q8BL06 1588 aaKnown RBP12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Lamc1P02468 1607 aaKnown RBP12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 Setbp1Q9Z180 1582 aa12.99□□□□□ -0.33
Clip1-204ENSMUST00000111564 HmmrQ00547 794 aaKnown RBP12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 GphnQ8BUV3 769 aaKnown RBP12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 4930572O03RikQ8C5Y0 211 aa12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Psma5Q9Z2U1 241 aaKnown RBP12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Dennd6aQ8BH65 605 aa12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Znf704Q9ERQ3 566 aa12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Sall3Q62255 1320 aa12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Abca9Q8K449 1623 aa12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Hnrnpul1Q8VDM6 859 aaKnown RBP12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Znf518aB2RRF6 1478 aaKnown RBP12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Gli2Q0VGT2 1544 aa12.98□□□□□ -0.33
Clip1-204ENSMUST00000111564 Pde4bB1AWC9 736 aa12.97□□□□□ -0.33
Clip1-204ENSMUST00000111564 Fkbp4P30416 458 aa12.97□□□□□ -0.33
Clip1-204ENSMUST00000111564 Nap1l1P28656 391 aaKnown RBP12.97□□□□□ -0.33
Clip1-204ENSMUST00000111564 Ccdc34Q3UI66 367 aa12.97□□□□□ -0.33
Clip1-204ENSMUST00000111564 Neurl4Q5NCX5 1563 aa12.97□□□□□ -0.33
Clip1-204ENSMUST00000111564 Trpm2Q91YD4 1506 aa12.97□□□□□ -0.33
Clip1-204ENSMUST00000111564 Esx1O88933 382 aa12.97□□□□□ -0.33
Clip1-204ENSMUST00000111564 DroshaQ5HZJ0 1373 aaKnown RBP12.96□□□□□ -0.33
Clip1-204ENSMUST00000111564 Znf710Q3U288 666 aa12.96□□□□□ -0.33
Clip1-204ENSMUST00000111564 Ddrgk1Q80WW9 315 aa12.96□□□□□ -0.33
Clip1-204ENSMUST00000111564 Nos1Q9Z0J4 1429 aa12.96□□□□□ -0.33
Clip1-204ENSMUST00000111564 Gcom1E9PZ54 550 aa12.96□□□□□ -0.33
Clip1-204ENSMUST00000111564 MyzapQ3UIJ9 466 aa12.96□□□□□ -0.33
Clip1-204ENSMUST00000111564 Nectin2P32507 530 aa12.95□□□□□ -0.34
Clip1-204ENSMUST00000111564 TbcaP48428 108 aaKnown RBP12.95□□□□□ -0.34
Clip1-204ENSMUST00000111564 Pdcl3Q8BVF2 240 aa12.95□□□□□ -0.34
Clip1-204ENSMUST00000111564 Slc5a4bQ91ZP4 660 aa12.95□□□□□ -0.34
Clip1-204ENSMUST00000111564 NaspQ99MD9 773 aaKnown RBP12.95□□□□□ -0.34
Clip1-204ENSMUST00000111564 Pdcd11Q6NS46 1862 aaKnown RBP12.95□□□□□ -0.34
Clip1-204ENSMUST00000111564 Cyp46a1Q9WVK8 500 aa12.95□□□□□ -0.34
Clip1-204ENSMUST00000111564 MpripP97434 1024 aa12.94□□□□□ -0.34
Clip1-204ENSMUST00000111564 Plagl1Q9JLQ4 704 aa12.94□□□□□ -0.34
Clip1-204ENSMUST00000111564 Zrsr2Q62377 462 aaKnown RBP12.94□□□□□ -0.34
Clip1-204ENSMUST00000111564 NgdnQ9DB96 315 aaKnown RBP12.94□□□□□ -0.34
Clip1-204ENSMUST00000111564 Rfx1P48377 963 aa12.94□□□□□ -0.34
Clip1-204ENSMUST00000111564 ApobrQ8VBT6 942 aa12.94□□□□□ -0.34
Clip1-204ENSMUST00000111564 Clasp1Q80TV8 1535 aaKnown RBP12.94□□□□□ -0.34
Clip1-204ENSMUST00000111564 Kif1bQ60575 1816 aaKnown RBP12.93□□□□□ -0.34
Clip1-204ENSMUST00000111564 Rufy1Q8BIJ7 712 aa12.93□□□□□ -0.34
Clip1-204ENSMUST00000111564 Stk3Q9JI10 497 aa12.93□□□□□ -0.34
Clip1-204ENSMUST00000111564 Flad1Q8R123 492 aa12.93□□□□□ -0.34
Clip1-204ENSMUST00000111564 Mad1l1Q9WTX8 717 aaKnown RBP12.93□□□□□ -0.34
Clip1-204ENSMUST00000111564 Ripk4Q9ERK0 786 aa12.93□□□□□ -0.34
Clip1-204ENSMUST00000111564 Synj2Q9D2G5 1434 aa12.92□□□□□ -0.34
Clip1-204ENSMUST00000111564 Yeats2Q3TUF7 1407 aa12.92□□□□□ -0.34
Clip1-204ENSMUST00000111564 Znhit6Q3UFB2 460 aaKnown RBP12.92□□□□□ -0.34
Clip1-204ENSMUST00000111564 Hmgn5Q9JL35 406 aa12.92□□□□□ -0.34
Clip1-204ENSMUST00000111564 Kif4P33174 1231 aa12.92□□□□□ -0.34
Clip1-204ENSMUST00000111564 Naip6Q9JIB6 1403 aa12.91□□□□□ -0.34
Clip1-204ENSMUST00000111564 Kif16bB1AVY7 1312 aa12.91□□□□□ -0.34
Clip1-204ENSMUST00000111564 GlmnQ8BZM1 596 aa12.91□□□□□ -0.34
Clip1-204ENSMUST00000111564 Asxl1P59598 1514 aa12.91□□□□□ -0.34
Clip1-204ENSMUST00000111564 Ttc19Q8CC21 365 aa12.91□□□□□ -0.34
Clip1-204ENSMUST00000111564 Ubxn4Q8VCH8 506 aa12.91□□□□□ -0.34
Clip1-204ENSMUST00000111564 Smg6P61406 1418 aaKnown RBP12.91□□□□□ -0.34
Clip1-204ENSMUST00000111564 Camsap2Q8C1B1 1461 aa12.91□□□□□ -0.34
Clip1-204ENSMUST00000111564 A0A0U1RNP2 1173 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Bicdl1A0JNT9 577 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Lrrc45Q8CIM1 670 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 AglF8VPN4 1532 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Atp10aO54827 1508 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Chmp4cQ9D7F7 232 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Gripap1Q8VD04 806 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Eif3aP23116 1344 aaKnown RBP12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Pprc1Q6NZN1 1644 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Ints3Q7TPD0 1041 aaKnown RBP12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 Ccdc30Q8BVF4 654 aa12.9□□□□□ -0.34
Clip1-204ENSMUST00000111564 4933402E13RikQ9D4D2 429 aa12.9□□□□□ -0.35
Clip1-204ENSMUST00000111564 Nol8Q3UHX0 1147 aaKnown RBP12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Ccdc171E9Q1U1 1324 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Kif3cO35066 796 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Nutm1Q8BHP2 1126 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Erc1Q99MI1 1120 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Ush1cQ9ES64 910 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Mcm2P97310 904 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Atl3Q91YH5 541 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Polr3aB2RXC6 1390 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Cfap69Q8BH53 942 aa12.89□□□□□ -0.35
Clip1-204ENSMUST00000111564 Zkscan2G3X952 960 aa12.88□□□□□ -0.35
Clip1-204ENSMUST00000111564 Usp48Q3V0C5 1052 aa12.88□□□□□ -0.35
Clip1-204ENSMUST00000111564 Plcd4Q8K3R3 807 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms