RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Cabp2Q9JLK4 216 aa19.18■□□□□ 0.66
Trim11-203ENSMUST00000108810 Ccdc171E9Q1U1 1324 aa19.18■□□□□ 0.66
Trim11-203ENSMUST00000108810 Duxf3A0A0N4SV92 674 aa19.17■□□□□ 0.66
Trim11-203ENSMUST00000108810 Cdc37l1Q9CZP7 335 aa19.17■□□□□ 0.66
Trim11-203ENSMUST00000108810 Tmem2Q5FWI3 1383 aa19.17■□□□□ 0.66
Trim11-203ENSMUST00000108810 AampJ3QN89 436 aa19.17■□□□□ 0.66
Trim11-203ENSMUST00000108810 Robo1O89026 1612 aa19.16■□□□□ 0.66
Trim11-203ENSMUST00000108810 MpripP97434 1024 aa19.16■□□□□ 0.66
Trim11-203ENSMUST00000108810 Nckap5lQ6GQX2 1323 aa19.15■□□□□ 0.66
Trim11-203ENSMUST00000108810 NudcO35685 332 aaKnown RBP19.15■□□□□ 0.66
Trim11-203ENSMUST00000108810 Trpm3Q5F4S9 1721 aa19.15■□□□□ 0.66
Trim11-203ENSMUST00000108810 Slc35g1Q8BY79 368 aa19.14■□□□□ 0.66
Trim11-203ENSMUST00000108810 Ccdc60Q8C4J0 545 aa19.14■□□□□ 0.66
Trim11-203ENSMUST00000108810 Ppp1r3fQ9JIG4 799 aa19.14■□□□□ 0.66
Trim11-203ENSMUST00000108810 Rlbp1Q9Z275 317 aa19.13■□□□□ 0.65
Trim11-203ENSMUST00000108810 Gm21190A0A0G2JGJ6 266 aa19.13■□□□□ 0.65
Trim11-203ENSMUST00000108810 Gnai1B2RSH2 354 aa19.13■□□□□ 0.65
Trim11-203ENSMUST00000108810 Stk31Q99MW1 1018 aa19.13■□□□□ 0.65
Trim11-203ENSMUST00000108810 Gnai3Q9DC51 354 aa19.13■□□□□ 0.65
Trim11-203ENSMUST00000108810 Nfat5Q9WV30 1534 aa19.11■□□□□ 0.65
Trim11-203ENSMUST00000108810 Rad17Q6NXW6 688 aa19.11■□□□□ 0.65
Trim11-203ENSMUST00000108810 Nsd3Q6P2L6 1439 aa19.11■□□□□ 0.65
Trim11-203ENSMUST00000108810 Scaf1Q5U4C3 1256 aaKnown RBP19.11■□□□□ 0.65
Trim11-203ENSMUST00000108810 Adgrb1Q3UHD1 1582 aa19.1■□□□□ 0.65
Trim11-203ENSMUST00000108810 Vamp4O70480 141 aa19.1■□□□□ 0.65
Trim11-203ENSMUST00000108810 B4galnt3Q6L8S8 986 aa19.1■□□□□ 0.65
Trim11-203ENSMUST00000108810 Cabp4Q8VHC5 271 aa19.1■□□□□ 0.65
Trim11-203ENSMUST00000108810 Chmp5Q9D7S9 219 aa19.1■□□□□ 0.65
Trim11-203ENSMUST00000108810 EspnQ9ET47 871 aa19.1■□□□□ 0.65
Trim11-203ENSMUST00000108810 Wnk3Q80XP9 1757 aa19.1■□□□□ 0.65
Trim11-203ENSMUST00000108810 Ano8Q6PB70 1060 aa19.09■□□□□ 0.65
Trim11-203ENSMUST00000108810 Iqcf3Q9D498 203 aa19.09■□□□□ 0.65
Trim11-203ENSMUST00000108810 Sos1Q62245 1319 aa19.09■□□□□ 0.65
Trim11-203ENSMUST00000108810 Ncapd2Q8K2Z4 1392 aa19.08■□□□□ 0.65
Trim11-203ENSMUST00000108810 G3bp1P97855 465 aaKnown RBP19.08■□□□□ 0.65
Trim11-203ENSMUST00000108810 Plin1Q8CGN5 517 aa19.08■□□□□ 0.65
Trim11-203ENSMUST00000108810 Col18a1P39061 1774 aa19.07■□□□□ 0.64
Trim11-203ENSMUST00000108810 Hoxc9P09633 260 aa19.07■□□□□ 0.64
Trim11-203ENSMUST00000108810 Eya1P97767 591 aa19.07■□□□□ 0.64
Trim11-203ENSMUST00000108810 Siglec1Q62230 1695 aa19.06■□□□□ 0.64
Trim11-203ENSMUST00000108810 Ahnak2E9PYB0 1738 aaKnown RBP19.06■□□□□ 0.64
Trim11-203ENSMUST00000108810 Plekhm2Q80TQ5 1018 aa19.06■□□□□ 0.64
Trim11-203ENSMUST00000108810 Zfp777B9EKF4 885 aa19.05■□□□□ 0.64
Trim11-203ENSMUST00000108810 Arfgef2A2A5R2 1792 aa19.05■□□□□ 0.64
Trim11-203ENSMUST00000108810 Maco1Q7TQE6 664 aaKnown RBP19.05■□□□□ 0.64
Trim11-203ENSMUST00000108810 Dbr1Q923B1 550 aa19.05■□□□□ 0.64
Trim11-203ENSMUST00000108810 TmpoQ61033 693 aaKnown RBP19.04■□□□□ 0.64
Trim11-203ENSMUST00000108810 Scn4aQ9ER60 1841 aa19.04■□□□□ 0.64
Trim11-203ENSMUST00000108810 Ncoa4Q5U4H9 625 aa19.03■□□□□ 0.64
Trim11-203ENSMUST00000108810 Ccne1Q61457 408 aa19.03■□□□□ 0.64
Trim11-203ENSMUST00000108810 Klhdc4Q921I2 584 aa19.03■□□□□ 0.64
Trim11-203ENSMUST00000108810 Usp16Q99LG0 825 aa19.03■□□□□ 0.64
Trim11-203ENSMUST00000108810 KarsQ99MN1 595 aaKnown RBP19.03■□□□□ 0.64
Trim11-203ENSMUST00000108810 Wdr17E9Q271 1322 aa19.03■□□□□ 0.64
Trim11-203ENSMUST00000108810 Gm6268A2A3U9 297 aa19.02■□□□□ 0.64
Trim11-203ENSMUST00000108810 Q3UPC7 1272 aa19.02■□□□□ 0.64
Trim11-203ENSMUST00000108810 Cavin2Q63918 418 aaKnown RBP19.02■□□□□ 0.64
Trim11-203ENSMUST00000108810 Aldh1l1Q8R0Y6 902 aa19.01■□□□□ 0.63
Trim11-203ENSMUST00000108810 Slain2Q8CI08 581 aa19.01■□□□□ 0.63
Trim11-203ENSMUST00000108810 Gli3Q61602 1583 aa19■□□□□ 0.63
Trim11-203ENSMUST00000108810 Znf330Q922H9 316 aa19■□□□□ 0.63
Trim11-203ENSMUST00000108810 Nectin2P32507 530 aa18.99■□□□□ 0.63
Trim11-203ENSMUST00000108810 Tmem132eQ6IEE6 982 aa18.99■□□□□ 0.63
Trim11-203ENSMUST00000108810 MarsQ68FL6 902 aaKnown RBP18.99■□□□□ 0.63
Trim11-203ENSMUST00000108810 U2surpQ6NV83 1029 aaKnown RBP18.99■□□□□ 0.63
Trim11-203ENSMUST00000108810 TimelessQ9R1X4 1197 aa18.99■□□□□ 0.63
Trim11-203ENSMUST00000108810 Myo5bP21271 1818 aa18.98■□□□□ 0.63
Trim11-203ENSMUST00000108810 Fyb1O35601 819 aa18.98■□□□□ 0.63
Trim11-203ENSMUST00000108810 Tmco5bQ80X59 307 aa18.98■□□□□ 0.63
Trim11-203ENSMUST00000108810 Gimap6Q8K349 305 aa18.98■□□□□ 0.63
Trim11-203ENSMUST00000108810 Senp3Q9EP97 568 aaKnown RBP18.98■□□□□ 0.63
Trim11-203ENSMUST00000108810 Rtl5Q5DTT4 599 aa18.97■□□□□ 0.63
Trim11-203ENSMUST00000108810 Rangap1P46061 589 aaKnown RBP18.96■□□□□ 0.63
Trim11-203ENSMUST00000108810 Nutm1Q8BHP2 1126 aa18.96■□□□□ 0.63
Trim11-203ENSMUST00000108810 Ipo9Q91YE6 1041 aa18.96■□□□□ 0.63
Trim11-203ENSMUST00000108810 Kdm6aO70546 1401 aa18.94■□□□□ 0.62
Trim11-203ENSMUST00000108810 Nid2O88322 1403 aa18.94■□□□□ 0.62
Trim11-203ENSMUST00000108810 Brwd3A2AHJ4 1799 aa18.94■□□□□ 0.62
Trim11-203ENSMUST00000108810 Ltbp4Q8K4G1 1666 aa18.94■□□□□ 0.62
Trim11-203ENSMUST00000108810 Snap23O09044 210 aa18.94■□□□□ 0.62
Trim11-203ENSMUST00000108810 Hs1bp3Q3TC93 395 aa18.94■□□□□ 0.62
Trim11-203ENSMUST00000108810 MvpQ9EQK5 861 aa18.94■□□□□ 0.62
Trim11-203ENSMUST00000108810 Kif24Q6NWW5 1356 aa18.93■□□□□ 0.62
Trim11-203ENSMUST00000108810 Kcna6Q61923 529 aa18.93■□□□□ 0.62
Trim11-203ENSMUST00000108810 Rab11fip3Q8CHD8 1047 aa18.93■□□□□ 0.62
Trim11-203ENSMUST00000108810 Nup153E9Q3G8 1462 aaKnown RBP18.93■□□□□ 0.62
Trim11-203ENSMUST00000108810 AU019823E9PUQ3 292 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Prim1P20664 417 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Ggnbp2Q5SV77 696 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Atl3Q91YH5 541 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Kcnh5Q920E3 988 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Armcx1Q9CX83 456 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Ankrd44B2RXR6 993 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Evi5lH3BKQ3 813 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Chl1P70232 1209 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 HypkQ9CR41 129 aa18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 Msh6P54276 1358 aaKnown RBP18.92■□□□□ 0.62
Trim11-203ENSMUST00000108810 TatQ8QZR1 454 aa18.91■□□□□ 0.62
Trim11-203ENSMUST00000108810 Rtf1A2AQ19 715 aaKnown RBP18.91■□□□□ 0.62
Trim11-203ENSMUST00000108810 Igsf1Q7TQA1 1317 aa18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms