RNA–Protein interactions for RNA: ENSMUST00000076372.4

Sf3b4-201, Transcript of Splicing factor 3B subunit 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4-201ENSMUST00000076372 Robo1O89026 1612 aa20.25■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 1700123L14RikQ3V2K7 440 aa20.24■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Gas2l2Q5SSG4 860 aa20.23■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Cadps2Q8BYR5 1297 aa20.23■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Acsbg1Q99PU5 721 aa20.23■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Spef2Q8C9J3 1734 aa20.23■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Hspa1lP16627 641 aa20.23■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Stk31Q99MW1 1018 aa20.23■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Tet3Q8BG87 1668 aa20.23■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Znf541Q0GGX2 1363 aa20.22■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Erbb3Q61526 1339 aa20.22■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Siglec1Q62230 1695 aa20.22■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Smim5Q8BT42 78 aa20.22■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Nid2O88322 1403 aa20.21■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Atp7bQ64446 1462 aa20.21■□□□□ 0.83
Sf3b4-201ENSMUST00000076372 Atp10bB1AWN4 1474 aa20.2■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Ncbp3Q8BZR9 615 aaKnown RBP20.2■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Ciz1Q8VEH2 845 aa20.2■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Swt1Q9DBQ9 907 aa20.2■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Txnrd1Q9JMH6 613 aa20.2■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Ptpn23Q6PB44 1692 aa20.2■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Nol11Q8BJW5 723 aaKnown RBP20.19■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Zfp777B9EKF4 885 aa20.19■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Card10P58660 1021 aa20.19■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Amotl2Q8K371 772 aa20.19■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Kank1E9Q238 1360 aa20.19■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Uhrf1bp1B2KF50 1429 aa20.18■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Abca15E9PWH4 1668 aa20.18■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Zmym3Q9JLM4 1370 aa20.18■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Iqcf3Q9D498 203 aa20.17■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Tom1O88746 492 aa20.16■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Bcl9lQ67FY2 1494 aa20.16■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.15■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 TmpoQ61033 693 aaKnown RBP20.15■□□□□ 0.82
Sf3b4-201ENSMUST00000076372 OptnQ8K3K8 584 aa20.14■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Znf526Q8BI66 675 aa20.14■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Ybx3Q9JKB3 361 aaKnown RBP20.14■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Qtrt2B8ZXI1 415 aa20.13■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Ksr2Q3UVC0 959 aa20.13■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Cdhr2E9Q7P9 1308 aa20.13■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Kdm6aO70546 1401 aa20.13■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 CrklP47941 303 aa20.12■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 ZgpatQ8VDM1 511 aa20.12■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Col15a1O35206 1367 aa20.11■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 HdgfP51859 237 aaKnown RBP20.11■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 HypkQ9CR41 129 aa20.11■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Plekhh1Q80TI1 1356 aa20.11■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Slit2Q9R1B9 1521 aa20.11■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Senp3Q9EP97 568 aaKnown RBP20.1■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Upf2A2AT37 1269 aaKnown RBP20.1■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Snap23O09044 210 aa20.1■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Ppp1r37Q8BKR5 712 aa20.1■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Bcl2l12Q9D3J3 255 aa20.1■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Gm10471E9Q1C7 252 aa20.09■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Aplp2Q06335 707 aa20.09■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 RgmbQ7TQ33 436 aa20.09■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 TkfcQ8VC30 578 aa20.09■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Trim26Q99PN3 545 aa20.09■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Gsdma3Q5Y4Y6 464 aa20.08■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Ddx54Q8K4L0 874 aaKnown RBP20.08■□□□□ 0.81
Sf3b4-201ENSMUST00000076372 Ttc41Q692V3 1318 aa20.08■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Ttc21aQ8C0S4 1314 aa20.06■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Rbm25B2RY56 838 aaKnown RBP20.06■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Rab11fip3Q8CHD8 1047 aa20.06■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Polr3glQ8R0C0 218 aa20.06■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Ankrd50F7BE84 1390 aa20.06■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Zranb3Q6NZP1 1069 aa20.06■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Cdc37l1Q9CZP7 335 aa20.04■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Rtf1A2AQ19 715 aaKnown RBP20.04■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Arhgef1Q61210 920 aaKnown RBP20.04■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Klhdc4Q921I2 584 aa20.04■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Apbb1Q9QXJ1 710 aa20.04■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Calr4Q3TQS0 420 aa20.03■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Ccar1Q8CH18 1146 aaKnown RBP20.03■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Simc1E9Q6E9 1354 aa20.03■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Pak3Q61036 559 aa20.02■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Amotl1Q9D4H4 968 aa20.02■□□□□ 0.8
Sf3b4-201ENSMUST00000076372 Gnai1B2RSH2 354 aa20.02■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 CastP51125 788 aa20.02■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Slx1bQ8BX32 270 aa20.02■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Rwdd1Q9CQK7 243 aa20.02■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Gnai3Q9DC51 354 aa20.02■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Zfp142G5E869 1843 aa20.01■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Rtl5Q5DTT4 599 aa20.01■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 U2surpQ6NV83 1029 aaKnown RBP20.01■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Ahnak2E9PYB0 1738 aaKnown RBP20.01■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Marf1Q8BJ34 1730 aaKnown RBP20■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Ggnbp2Q5SV77 696 aa20■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Slc5a4bQ91ZP4 660 aa20■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Slit1Q80TR4 1531 aa20■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Prim1P20664 417 aa20■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Lrrc59Q922Q8 307 aaKnown RBP20■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 ThemisQ8BGW0 636 aa19.99■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Trpm3Q5F4S9 1721 aa19.99■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 NudcO35685 332 aaKnown RBP19.98■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Usp16Q99LG0 825 aa19.98■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Pard3Q99NH2 1333 aa19.98■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Fam50bQ9WTJ8 334 aa19.98■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Plekhd1B2RPU2 505 aa19.97■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Zpr1Q62384 459 aa19.97■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms