RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Mrs2Q5NCE8 434 aa15.55■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Wdr17E9Q271 1322 aa15.55■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Atf3Q60765 181 aa15.54■□□□□ 0.08
Upk3b-201ENSMUST00000062606 FocadA2AKG8 1798 aa15.53■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Ncapd2Q8K2Z4 1392 aa15.53■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Ncoa4Q5U4H9 625 aa15.52■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Tex14Q7M6U3 1450 aa15.52■□□□□ 0.07
Upk3b-201ENSMUST00000062606 IbtkQ6ZPR6 1352 aaKnown RBP15.52■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Chrm1P12657 460 aa15.51■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Ptpn23Q6PB44 1692 aa15.51■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Slc4a2P13808 1237 aaKnown RBP15.5■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Ano8Q6PB70 1060 aa15.5■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Zscan10Q3URR7 782 aa15.49■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Farp2Q91VS8 1065 aa15.49■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Tmed8Q3UHI4 326 aa15.49■□□□□ 0.07
Upk3b-201ENSMUST00000062606 NinlQ6ZQ12 1394 aa15.49■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Paxip1Q6NZQ4 1056 aa15.48■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Exosc9Q9JHI7 438 aaKnown RBP15.48■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Kcng1A2BDX4 514 aa15.48■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Ap3b2Q9JME5 1082 aa15.48■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Znf541Q0GGX2 1363 aa15.48■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Cers3Q1A3B0 383 aa15.47■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Pank3Q8R2W9 370 aa15.47■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Evi5lH3BKQ3 813 aa15.47■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Kif24Q6NWW5 1356 aa15.47■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Sparcl1P70663 650 aa15.47■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Slit2Q9R1B9 1521 aa15.46■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Nhsl1Q8CAF4 1587 aa15.46■□□□□ 0.07
Upk3b-201ENSMUST00000062606 Stac3Q8BZ71 360 aa15.45■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Gimap6Q8K349 305 aa15.44■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Kat6bQ8BRB7 1872 aa15.44■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Cadps2Q8BYR5 1297 aa15.44■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Kcnh8P59111 1102 aa15.43■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Hspa1lP16627 641 aa15.43■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Atf7ipQ7TT18 1306 aa15.43■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Fbxo41Q6NS60 873 aa15.43■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Fbxo2Q80UW2 297 aa15.42■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Frmpd2A0A140LI67 1392 aa15.42■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Wwc2Q6NXJ0 1187 aa15.41■□□□□ 0.06
Upk3b-201ENSMUST00000062606 PogkQ80TC5 607 aa15.41■□□□□ 0.06
Upk3b-201ENSMUST00000062606 MpndQ3TV65 487 aa15.4■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Rab3gap2Q8BMG7 1366 aa15.4■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Inpp5dQ9ES52 1191 aa15.4■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Nid2O88322 1403 aa15.4■□□□□ 0.06
Upk3b-201ENSMUST00000062606 Prdm10Q3UTQ7 1184 aa15.39■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Kif16bB1AVY7 1312 aa15.39■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Exoc6Q8R313 802 aa15.39■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Col22a1E9Q7P1 1613 aa15.38■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Gimap5Q8BWF2 308 aa15.38■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Phf14Q9D4H9 881 aa15.38■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Ybx3Q9JKB3 361 aaKnown RBP15.38■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Myo5bP21271 1818 aa15.38■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Sh3bp1P55194 680 aa15.38■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Shank2Q80Z38 1476 aa15.38■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Gtpbp6Q3U6U5 514 aa15.37■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Trim28Q62318 834 aa15.37■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Ttll13A4Q9F6 804 aa15.36■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Lekr1B2RVN1 116 aa15.36■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Tom1O88746 492 aa15.36■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Trpm3Q5F4S9 1721 aa15.36■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Rrp12Q6P5B0 1295 aaKnown RBP15.35■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Zranb1Q7M760 708 aa15.35■□□□□ 0.05
Upk3b-201ENSMUST00000062606 ZgpatQ8VDM1 511 aa15.35■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Kif20aP97329 887 aa15.34■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Ofd1Q80Z25 1017 aa15.34■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Kcnh5Q920E3 988 aa15.34■□□□□ 0.05
Upk3b-201ENSMUST00000062606 TnrQ8BYI9 1358 aa15.34■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Zhx1P70121 873 aa15.34■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Speer4f2E9Q366 295 aa15.34■□□□□ 0.05
Upk3b-201ENSMUST00000062606 Arfgef2A2A5R2 1792 aa15.33■□□□□ 0.05
Upk3b-201ENSMUST00000062606 L3mbtl2P59178 703 aa15.33■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Slit1Q80TR4 1531 aa15.33■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Kif7B7ZNG0 1348 aa15.32■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Nwd2Q6P5U7 1742 aa15.32■□□□□ 0.04
Upk3b-201ENSMUST00000062606 PnisrA2AJT4 805 aaKnown RBP15.32■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Cald1E9QA15 768 aaKnown RBP15.32■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Slx1bQ8BX32 270 aa15.32■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Nlgn1Q99K10 843 aa15.32■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Tnks1bp1P58871 1720 aa15.32■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Fnbp4Q6ZQ03 1031 aa15.32■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Gys2Q8VCB3 704 aa15.31■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Plin1Q8CGN5 517 aa15.31■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Chmp4cQ9D7F7 232 aa15.31■□□□□ 0.04
Upk3b-201ENSMUST00000062606 MycnP03966 462 aaKnown RBP15.31■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Slc35g1Q8BY79 368 aa15.31■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Fyb1O35601 819 aa15.3■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Znf526Q8BI66 675 aa15.3■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Gpatch11Q3UFS4 262 aa15.3■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Adgrb1Q3UHD1 1582 aa15.3■□□□□ 0.04
Upk3b-201ENSMUST00000062606 CanxP35564 591 aaKnown RBP15.29■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Tpm2P58774 284 aa15.29■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Fer1l6E0CZ42 1862 aa15.29■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Igsf3Q6ZQA6 1194 aa15.29■□□□□ 0.04
Upk3b-201ENSMUST00000062606 EspnQ9ET47 871 aa15.29■□□□□ 0.04
Upk3b-201ENSMUST00000062606 PappaQ8R4K8 1624 aa15.29■□□□□ 0.04
Upk3b-201ENSMUST00000062606 FancaQ9JL70 1439 aa15.29■□□□□ 0.04
Upk3b-201ENSMUST00000062606 PaskQ8CEE6 1383 aa15.28■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Sh3bp5Q9Z131 463 aa15.28■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Ppp2r1aQ76MZ3 589 aa15.28■□□□□ 0.04
Upk3b-201ENSMUST00000062606 Dennd6aQ8BH65 605 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms