RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Aldh1l1Q8R0Y6 902 aa18.22■□□□□ 0.51
Msx3-201ENSMUST00000055353 GorabQ8BRM2 368 aa18.21■□□□□ 0.51
Msx3-201ENSMUST00000055353 Dmrtc1Q9D9R7 182 aa18.21■□□□□ 0.51
Msx3-201ENSMUST00000055353 Tfip11Q9ERA6 838 aaKnown RBP18.21■□□□□ 0.51
Msx3-201ENSMUST00000055353 Cabp2Q9JLK4 216 aa18.21■□□□□ 0.51
Msx3-201ENSMUST00000055353 CltcQ68FD5 1675 aaKnown RBP18.21■□□□□ 0.5
Msx3-201ENSMUST00000055353 Uhrf1bp1lA2RSJ4 1457 aa18.2■□□□□ 0.5
Msx3-201ENSMUST00000055353 Naip7Q9JIB3 1402 aa18.2■□□□□ 0.5
Msx3-201ENSMUST00000055353 U2surpQ6NV83 1029 aaKnown RBP18.2■□□□□ 0.5
Msx3-201ENSMUST00000055353 MvpQ9EQK5 861 aa18.2■□□□□ 0.5
Msx3-201ENSMUST00000055353 Fchsd2Q3USJ8 740 aa18.19■□□□□ 0.5
Msx3-201ENSMUST00000055353 Pabpn1Q8CCS6 302 aaKnown RBP18.19■□□□□ 0.5
Msx3-201ENSMUST00000055353 Atp7bQ64446 1462 aa18.19■□□□□ 0.5
Msx3-201ENSMUST00000055353 Kif13aQ9EQW7 1749 aa18.19■□□□□ 0.5
Msx3-201ENSMUST00000055353 Ddit3P35639 168 aa18.18■□□□□ 0.5
Msx3-201ENSMUST00000055353 Mcm4P49717 862 aa18.18■□□□□ 0.5
Msx3-201ENSMUST00000055353 Wdr63B2RY71 923 aa18.17■□□□□ 0.5
Msx3-201ENSMUST00000055353 Usp16Q99LG0 825 aa18.17■□□□□ 0.5
Msx3-201ENSMUST00000055353 KnstrnQ9D9Z1 312 aaKnown RBP18.17■□□□□ 0.5
Msx3-201ENSMUST00000055353 Usp32F8VPZ3 1604 aa18.17■□□□□ 0.5
Msx3-201ENSMUST00000055353 Plcb2A3KGF7 1181 aa18.17■□□□□ 0.5
Msx3-201ENSMUST00000055353 Ankrd44B2RXR6 993 aa18.17■□□□□ 0.5
Msx3-201ENSMUST00000055353 Il4rP16382 810 aa18.16■□□□□ 0.5
Msx3-201ENSMUST00000055353 Tbc1d9Q3UYK3 1264 aa18.16■□□□□ 0.5
Msx3-201ENSMUST00000055353 Nek4Q9Z1J2 792 aa18.16■□□□□ 0.5
Msx3-201ENSMUST00000055353 Znf541Q0GGX2 1363 aa18.15■□□□□ 0.5
Msx3-201ENSMUST00000055353 Ppp1r15aP17564 657 aa18.15■□□□□ 0.5
Msx3-201ENSMUST00000055353 Gm10093D3YYI8 482 aa18.14■□□□□ 0.49
Msx3-201ENSMUST00000055353 Hdac1O09106 482 aaKnown RBP18.14■□□□□ 0.49
Msx3-201ENSMUST00000055353 CarsQ9ER72 831 aaKnown RBP18.14■□□□□ 0.49
Msx3-201ENSMUST00000055353 Trim27Q62158 513 aa18.13■□□□□ 0.49
Msx3-201ENSMUST00000055353 Gnai1B2RSH2 354 aa18.13■□□□□ 0.49
Msx3-201ENSMUST00000055353 Ccdc146E9Q9F7 977 aa18.13■□□□□ 0.49
Msx3-201ENSMUST00000055353 Stk11ipQ3TAA7 1072 aa18.13■□□□□ 0.49
Msx3-201ENSMUST00000055353 Aifm3Q3TY86 605 aa18.13■□□□□ 0.49
Msx3-201ENSMUST00000055353 Gnai3Q9DC51 354 aa18.13■□□□□ 0.49
Msx3-201ENSMUST00000055353 1700019A02RikA0A087WPV9 146 aa18.12■□□□□ 0.49
Msx3-201ENSMUST00000055353 LifrP42703 1092 aa18.12■□□□□ 0.49
Msx3-201ENSMUST00000055353 NgefQ8CHT1 710 aa18.12■□□□□ 0.49
Msx3-201ENSMUST00000055353 Rsph6aQ8CDR2 708 aa18.11■□□□□ 0.49
Msx3-201ENSMUST00000055353 Itsn1Q9Z0R4 1714 aa18.11■□□□□ 0.49
Msx3-201ENSMUST00000055353 Wwc1Q5SXA9 1104 aa18.1■□□□□ 0.49
Msx3-201ENSMUST00000055353 Ric3Q8BPM6 367 aa18.1■□□□□ 0.49
Msx3-201ENSMUST00000055353 Pibf1E9Q6K3 756 aa18.09■□□□□ 0.49
Msx3-201ENSMUST00000055353 FanclQ9CR14 375 aa18.09■□□□□ 0.49
Msx3-201ENSMUST00000055353 MpripP97434 1024 aa18.09■□□□□ 0.49
Msx3-201ENSMUST00000055353 Ercc6l2Q9JIM3 1537 aa18.08■□□□□ 0.49
Msx3-201ENSMUST00000055353 Nwd1A6H603 1563 aa18.08■□□□□ 0.49
Msx3-201ENSMUST00000055353 Triml2E9PW10 424 aa18.08■□□□□ 0.48
Msx3-201ENSMUST00000055353 Cetn4Q8K4K1 168 aa18.07■□□□□ 0.48
Msx3-201ENSMUST00000055353 Smarca5Q91ZW3 1051 aaKnown RBP18.07■□□□□ 0.48
Msx3-201ENSMUST00000055353 PplQ9R269 1755 aa18.07■□□□□ 0.48
Msx3-201ENSMUST00000055353 Plekhg1F6S200 1446 aa18.07■□□□□ 0.48
Msx3-201ENSMUST00000055353 IghaA0A0A6YXW6 389 aa18.06■□□□□ 0.48
Msx3-201ENSMUST00000055353 AU015836B2RUM3 263 aa18.06■□□□□ 0.48
Msx3-201ENSMUST00000055353 DekQ7TNV0 380 aaKnown RBP18.06■□□□□ 0.48
Msx3-201ENSMUST00000055353 Pdcl3Q8BVF2 240 aa18.06■□□□□ 0.48
Msx3-201ENSMUST00000055353 Fbxo3Q9DC63 480 aa18.06■□□□□ 0.48
Msx3-201ENSMUST00000055353 Vsig10D3YX43 558 aa18.05■□□□□ 0.48
Msx3-201ENSMUST00000055353 Tshz2Q68FE9 1030 aa18.05■□□□□ 0.48
Msx3-201ENSMUST00000055353 MarsQ68FL6 902 aaKnown RBP18.05■□□□□ 0.48
Msx3-201ENSMUST00000055353 Kif24Q6NWW5 1356 aa18.05■□□□□ 0.48
Msx3-201ENSMUST00000055353 Rsph3aQ3UFY4 516 aa18.04■□□□□ 0.48
Msx3-201ENSMUST00000055353 DmtnQ9WV69 405 aa18.04■□□□□ 0.48
Msx3-201ENSMUST00000055353 Eif4a2P10630 407 aa18.03■□□□□ 0.48
Msx3-201ENSMUST00000055353 Rtn4Q99P72 1162 aaKnown RBP18.03■□□□□ 0.48
Msx3-201ENSMUST00000055353 Spef2Q8C9J3 1734 aa18.03■□□□□ 0.48
Msx3-201ENSMUST00000055353 Idi2Q8BFZ6 227 aa18.03■□□□□ 0.48
Msx3-201ENSMUST00000055353 Ppp1r18Q8BQ30 594 aa18.03■□□□□ 0.48
Msx3-201ENSMUST00000055353 Psme1P97371 249 aa18.02■□□□□ 0.48
Msx3-201ENSMUST00000055353 Synj2Q9D2G5 1434 aa18.02■□□□□ 0.47
Msx3-201ENSMUST00000055353 Txndc2Q6P902 515 aa18.02■□□□□ 0.47
Msx3-201ENSMUST00000055353 Eif4g2Q62448 906 aaKnown RBP18.01■□□□□ 0.47
Msx3-201ENSMUST00000055353 EngaseQ8BX80 734 aa18.01■□□□□ 0.47
Msx3-201ENSMUST00000055353 Phf14Q9D4H9 881 aa18.01■□□□□ 0.47
Msx3-201ENSMUST00000055353 Chd4Q6PDQ2 1915 aaKnown RBP18.01■□□□□ 0.47
Msx3-201ENSMUST00000055353 Fam13aQ8BGI4 693 aa18.01■□□□□ 0.47
Msx3-201ENSMUST00000055353 SlkO54988 1233 aa18■□□□□ 0.47
Msx3-201ENSMUST00000055353 Vgll3P85442 326 aa18■□□□□ 0.47
Msx3-201ENSMUST00000055353 Ggnbp2Q5SV77 696 aa18■□□□□ 0.47
Msx3-201ENSMUST00000055353 Snap23O09044 210 aa17.99■□□□□ 0.47
Msx3-201ENSMUST00000055353 CalcaP70160 136 aa17.99■□□□□ 0.47
Msx3-201ENSMUST00000055353 Znf692Q3U381 531 aa17.99■□□□□ 0.47
Msx3-201ENSMUST00000055353 Bloc1s4Q8VED2 215 aa17.99■□□□□ 0.47
Msx3-201ENSMUST00000055353 Kdm4cQ8VCD7 1054 aa17.99■□□□□ 0.47
Msx3-201ENSMUST00000055353 Stk31Q99MW1 1018 aa17.99■□□□□ 0.47
Msx3-201ENSMUST00000055353 CenppQ9CZ92 286 aa17.98■□□□□ 0.47
Msx3-201ENSMUST00000055353 Paxip1Q6NZQ4 1056 aa17.98■□□□□ 0.47
Msx3-201ENSMUST00000055353 Aldh8a1Q8BH00 487 aa17.98■□□□□ 0.47
Msx3-201ENSMUST00000055353 Cc2d1aQ8K1A6 943 aa17.98■□□□□ 0.47
Msx3-201ENSMUST00000055353 Ppp6r3Q922D4 844 aa17.98■□□□□ 0.47
Msx3-201ENSMUST00000055353 Chmp4bQ9D8B3 224 aaKnown RBP17.98■□□□□ 0.47
Msx3-201ENSMUST00000055353 Ppip5k2Q6ZQB6 1129 aa17.97■□□□□ 0.47
Msx3-201ENSMUST00000055353 Prim1P20664 417 aa17.97■□□□□ 0.47
Msx3-201ENSMUST00000055353 Cavin2Q63918 418 aaKnown RBP17.97■□□□□ 0.47
Msx3-201ENSMUST00000055353 Rab11fip3Q8CHD8 1047 aa17.97■□□□□ 0.47
Msx3-201ENSMUST00000055353 4933402E13RikQ9D4D2 429 aa17.97■□□□□ 0.47
Msx3-201ENSMUST00000055353 Ncapd2Q8K2Z4 1392 aa17.97■□□□□ 0.47
Msx3-201ENSMUST00000055353 Pdia3P27773 505 aaKnown RBP17.96■□□□□ 0.47
Msx3-201ENSMUST00000055353 Chl1P70232 1209 aa17.96■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms