RNA–Protein interactions for RNA: ENSMUST00000047207.6

Ccdc27-201, Transcript of Coiled-coil domain-containing protein 27, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc27, Length 2,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27-201ENSMUST00000047207 Zkscan1Q8BGS3 561 aaKnown RBP17.45■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Aldh8a1Q8BH00 487 aa17.45■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 PtmsQ9D0J8 101 aaKnown RBP17.45■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Nsd3Q6P2L6 1439 aa17.45■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 CarsQ9ER72 831 aaKnown RBP17.44■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Aplp1Q03157 653 aa17.43■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Lemd3Q9WU40 921 aa17.43■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Becn1O88597 448 aa17.42■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Q4VA45 678 aa17.42■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Trim27Q62158 513 aa17.42■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 GorabQ8BRM2 368 aa17.42■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Mroh1E0CZ22 1640 aa17.42■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 CltcQ68FD5 1675 aaKnown RBP17.42■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Rasa1E9PYG6 1038 aa17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Pdia4P08003 638 aaKnown RBP17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Mcm2P97310 904 aa17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Nutm1Q8BHP2 1126 aa17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Dmrtc1Q9D9R7 182 aa17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Erbb4Q61527 1308 aa17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Vamp4O70480 141 aa17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Gcc1Q9D4H2 778 aa17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Exosc9Q9JHI7 438 aaKnown RBP17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 NinlQ6ZQ12 1394 aa17.41■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Mdc1Q5PSV9 1707 aa17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Ppip5k2Q6ZQB6 1129 aa17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Mknk2Q8CDB0 459 aa17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 HnrnpuQ8VEK3 800 aaKnown RBP17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Elp1Q7TT37 1333 aaKnown RBP17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Zfp777B9EKF4 885 aa17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 PtmaP26350 111 aa17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Cavin2Q63918 418 aaKnown RBP17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 4931400O07RikQ9D4M5 137 aa17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Erich6bQ9D4S6 220 aa17.4■□□□□ 0.38
Ccdc27-201ENSMUST00000047207 Eif4g2Q62448 906 aaKnown RBP17.38■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Rbm10Q99KG3 930 aaKnown RBP17.38■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Cdc37l1Q9CZP7 335 aa17.38■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Tmco5bQ80X59 307 aa17.38■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Arhgap23Q69ZH9 1483 aa17.37■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Nectin2P32507 530 aa17.36■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Trim28Q62318 834 aa17.36■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Gnai1B2RSH2 354 aa17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Nucb1Q02819 459 aaKnown RBP17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Aldh1l2Q8K009 923 aa17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Ppp6r3Q922D4 844 aa17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Gnai3Q9DC51 354 aa17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Rnf123Q5XPI3 1314 aa17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Lekr1B2RVN1 116 aa17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Slc12a5Q91V14 1138 aa17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Glipr1l2Q9CQ35 332 aa17.35■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Irf5P56477 497 aa17.34■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Kdm4aQ8BW72 1064 aa17.34■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Gli2Q0VGT2 1544 aa17.34■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Ptch1Q61115 1434 aa17.33■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Cyp27a1Q9DBG1 533 aa17.33■□□□□ 0.37
Ccdc27-201ENSMUST00000047207 Synj2Q9D2G5 1434 aa17.33■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Pdia3P27773 505 aaKnown RBP17.33■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Pnma3Q8JZW8 466 aa17.33■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 PalmQ9Z0P4 383 aa17.33■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Cdk12Q14AX6 1484 aaKnown RBP17.33■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Ccdc146E9Q9F7 977 aa17.32■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Rangap1P46061 589 aaKnown RBP17.32■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 MarsQ68FL6 902 aaKnown RBP17.32■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Sos1Q62245 1319 aa17.32■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Gm9992B2RWK3 458 aa17.32■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Unc93aQ710D3 458 aa17.32■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Mrps27Q8BK72 415 aaKnown RBP17.32■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Zdhhc9P59268 364 aa17.31■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Atp10aO54827 1508 aa17.31■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Vsig10D3YX43 558 aa17.3■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Gzf1Q4VBD9 706 aa17.3■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 OvosQ3UU35 1456 aa17.29■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Gsto1O09131 240 aa17.29■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Tm6sf1P58749 370 aa17.29■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Rab11fip3Q8CHD8 1047 aa17.29■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Rcan3Q9JKK0 239 aa17.28■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Mindy4Q3UQI9 744 aa17.28■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Spef2Q8C9J3 1734 aa17.28■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Zscan25B2RX31 543 aa17.27■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Ppp1r15aP17564 657 aa17.27■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Knl1Q66JQ7 1612 aa17.27■□□□□ 0.36
Ccdc27-201ENSMUST00000047207 Arhgef28P97433 1693 aa17.27■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Kif20bQ80WE4 1774 aaKnown RBP17.27■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 NcapgE9PWG6 1004 aa17.27■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 FanclQ9CR14 375 aa17.27■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Adamts7Q68SA9 1657 aa17.26■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Ythdc2B2RR83 1445 aaKnown RBP17.26■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Kif4P33174 1231 aa17.26■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Gripap1Q8VD04 806 aa17.26■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Rps6ka5Q8C050 863 aa17.25■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Pank2Q3U4S0 443 aa17.25■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 PtprmP28828 1452 aa17.25■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Anp32cQ64G17 123 aa17.24■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Zranb1Q7M760 708 aa17.24■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Fam13aQ8BGI4 693 aa17.24■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Ric3Q8BPM6 367 aa17.24■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Gm45015A0A140LII9 184 aa17.24■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Gm18336A0A140LIU8 765 aa17.24■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Ccdc173A0JLY1 547 aa17.24■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Syce3B5KM66 88 aa17.24■□□□□ 0.35
Ccdc27-201ENSMUST00000047207 Wdr78E9PYY5 807 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms