RNA–Protein interactions for RNA: ENSMUST00000034388.9

Vps4a-201, Transcript of Vacuolar protein sorting-associated protein 4A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4a, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4a-201ENSMUST00000034388 Cgnl1Q6AW69 1298 aa21.85■■□□□ 1.09
Vps4a-201ENSMUST00000034388 Nsd3Q6P2L6 1439 aa21.84■■□□□ 1.09
Vps4a-201ENSMUST00000034388 Nsfl1cQ9CZ44 370 aaKnown RBP21.83■■□□□ 1.09
Vps4a-201ENSMUST00000034388 NinlQ6ZQ12 1394 aa21.82■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Slc12a5Q91V14 1138 aa21.82■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Vamp4O70480 141 aa21.82■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Cavin2Q63918 418 aaKnown RBP21.82■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Prrc2bQ7TPM1 1486 aaKnown RBP21.81■■□□□ 1.08
Vps4a-201ENSMUST00000034388 1700010I14RikQ7TPG0 532 aa21.81■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Stk26Q99JT2 416 aa21.81■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Cdc37l1Q9CZP7 335 aa21.81■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Gnai1B2RSH2 354 aa21.8■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Rfx1P48377 963 aa21.8■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Tbc1d9Q3UYK3 1264 aa21.8■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Gnai3Q9DC51 354 aa21.8■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Plekhg1F6S200 1446 aa21.8■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Rrp12Q6P5B0 1295 aaKnown RBP21.8■■□□□ 1.08
Vps4a-201ENSMUST00000034388 PalmQ9Z0P4 383 aa21.8■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Arhgef28P97433 1693 aa21.79■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Anapc15-psA0A140T8L6 141 aa21.78■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Aldh8a1Q8BH00 487 aa21.78■■□□□ 1.08
Vps4a-201ENSMUST00000034388 CarsQ9ER72 831 aaKnown RBP21.78■■□□□ 1.08
Vps4a-201ENSMUST00000034388 PtprmP28828 1452 aa21.78■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Tmco5bQ80X59 307 aa21.78■■□□□ 1.08
Vps4a-201ENSMUST00000034388 HnrnpuQ8VEK3 800 aaKnown RBP21.78■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Ppp1r15aP17564 657 aa21.77■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Nutm1Q8BHP2 1126 aa21.77■■□□□ 1.08
Vps4a-201ENSMUST00000034388 NktrP30415 1453 aa21.77■■□□□ 1.08
Vps4a-201ENSMUST00000034388 Shq1Q7TMX5 569 aa21.77■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Cep170bQ80U49 1574 aa21.76■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Sos1Q62245 1319 aa21.76■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Paxip1Q6NZQ4 1056 aa21.76■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Zranb1Q7M760 708 aa21.76■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Cdk19Q8BWD8 501 aa21.76■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Trim44Q9QXA7 346 aa21.76■■□□□ 1.07
Vps4a-201ENSMUST00000034388 CenppQ9CZ92 286 aa21.75■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Ahdc1Q6PAL7 1594 aaKnown RBP21.75■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Mcm2P97310 904 aa21.75■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Trim27Q62158 513 aa21.75■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Tfip11Q9ERA6 838 aaKnown RBP21.75■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Casq1O09165 405 aa21.74■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Ddrgk1Q80WW9 315 aa21.74■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Gcc1Q9D4H2 778 aa21.74■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Nek4Q9Z1J2 792 aa21.74■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Nectin2P32507 530 aa21.73■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Atp2b2Q9R0K7 1198 aa21.73■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Aldh1l2Q8K009 923 aa21.72■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Dip2bQ3UH60 1574 aa21.72■■□□□ 1.07
Vps4a-201ENSMUST00000034388 Eif4g2Q62448 906 aaKnown RBP21.71■■□□□ 1.07
Vps4a-201ENSMUST00000034388 MarsQ68FL6 902 aaKnown RBP21.7■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Atp1b4Q99ME6 356 aa21.7■■□□□ 1.06
Vps4a-201ENSMUST00000034388 ScaperF8VQ70 1398 aaKnown RBP21.7■■□□□ 1.06
Vps4a-201ENSMUST00000034388 4930407I10RikD3Z5T8 1512 aa21.7■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Aplp1Q03157 653 aa21.7■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Abca14E9Q8F8 1683 aa21.7■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Spef2Q8C9J3 1734 aa21.69■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Rangap1P46061 589 aaKnown RBP21.68■■□□□ 1.06
Vps4a-201ENSMUST00000034388 EngaseQ8BX80 734 aa21.68■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Utp14aQ640M1 767 aaKnown RBP21.68■■□□□ 1.06
Vps4a-201ENSMUST00000034388 PtmsQ9D0J8 101 aaKnown RBP21.68■■□□□ 1.06
Vps4a-201ENSMUST00000034388 DekQ7TNV0 380 aaKnown RBP21.67■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Tmx3Q8BXZ1 456 aa21.67■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Bag4Q8CI61 457 aa21.67■■□□□ 1.06
Vps4a-201ENSMUST00000034388 SlkO54988 1233 aa21.67■■□□□ 1.06
Vps4a-201ENSMUST00000034388 GorabQ8BRM2 368 aa21.67■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Ercc6l2Q9JIM3 1537 aa21.66■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Ppip5k2Q6ZQB6 1129 aa21.65■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Rab11fip3Q8CHD8 1047 aa21.65■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Zkscan1Q8BGS3 561 aaKnown RBP21.65■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Elp1Q7TT37 1333 aaKnown RBP21.64■■□□□ 1.06
Vps4a-201ENSMUST00000034388 PplQ9R269 1755 aa21.64■■□□□ 1.06
Vps4a-201ENSMUST00000034388 Bcl9Q9D219 1425 aa21.64■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Map3k19E9Q3S4 1311 aa21.64■■□□□ 1.05
Vps4a-201ENSMUST00000034388 ImpactO55091 318 aa21.64■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Brwd3A2AHJ4 1799 aa21.63■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Tm6sf1P58749 370 aa21.63■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Usp16Q99LG0 825 aa21.63■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Cdk12Q14AX6 1484 aaKnown RBP21.62■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Hoxb7P09024 217 aa21.62■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Bloc1s4Q8VED2 215 aa21.62■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Kif1aP33173 1695 aa21.62■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Tpm2P58774 284 aa21.61■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Nucb1Q02819 459 aaKnown RBP21.61■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Ric3Q8BPM6 367 aa21.61■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Ppp6r3Q922D4 844 aa21.61■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Clcn1Q64347 994 aa21.61■■□□□ 1.05
Vps4a-201ENSMUST00000034388 PogkQ80TC5 607 aa21.61■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Q9D9H8 365 aa21.61■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Pdcl2Q78Y63 240 aa21.6■■□□□ 1.05
Vps4a-201ENSMUST00000034388 DmtnQ9WV69 405 aa21.6■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Kif20bQ80WE4 1774 aaKnown RBP21.59■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Rnf123Q5XPI3 1314 aa21.59■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Uhrf1bp1lA2RSJ4 1457 aa21.59■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Ccdc146E9Q9F7 977 aa21.58■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Rsph6aQ8CDR2 708 aa21.58■■□□□ 1.05
Vps4a-201ENSMUST00000034388 Nwd1A6H603 1563 aa21.58■■□□□ 1.04
Vps4a-201ENSMUST00000034388 Pdia3P27773 505 aaKnown RBP21.57■■□□□ 1.04
Vps4a-201ENSMUST00000034388 Kif24Q6NWW5 1356 aa21.57■■□□□ 1.04
Vps4a-201ENSMUST00000034388 Birc3O08863 600 aa21.57■■□□□ 1.04
Vps4a-201ENSMUST00000034388 GphnQ8BUV3 769 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms