RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 AU015836B2RUM3 263 aa16.97■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Mre11Q61216 706 aa16.97■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Sos1Q62245 1319 aa16.97■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Nkx1-2P42580 305 aa16.96■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Cavin2Q63918 418 aaKnown RBP16.96■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Apbb1Q9QXJ1 710 aa16.96■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Nrxn3Q6P9K9 1571 aa16.96■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Frmpd2A0A140LI67 1392 aa16.96■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Gsto1O09131 240 aa16.96■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Utp14aQ640M1 767 aaKnown RBP16.96■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 Dbr1Q923B1 550 aa16.96■□□□□ 0.31
Prpf38b-201ENSMUST00000029480 CemipQ8BI06 1361 aa16.95■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Iqcf3Q9D498 203 aa16.95■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Ubr1O70481 1757 aa16.95■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Rreb1Q3UH06 1700 aaKnown RBP16.95■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Stk26Q99JT2 416 aa16.95■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Adgrb1Q3UHD1 1582 aa16.94■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Cavin4A2AMM0 362 aa16.94■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Astn2Q80Z10 1352 aa16.93■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Pdlim2Q8R1G6 349 aa16.93■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Col16a1Q8BLX7 1580 aa16.93■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Ankrd50F7BE84 1390 aa16.93■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 NudcO35685 332 aaKnown RBP16.93■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Dusp27Q148W8 1138 aa16.93■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 P2rx7Q9Z1M0 595 aa16.93■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Scn4aQ9ER60 1841 aa16.92■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Ncapd2Q8K2Z4 1392 aa16.92■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Irx6Q9ER75 438 aa16.92■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 DaxxO35613 739 aa16.91■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Ppp1r15aP17564 657 aa16.91■□□□□ 0.3
Prpf38b-201ENSMUST00000029480 Prdm10Q3UTQ7 1184 aa16.89■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Wwc1Q5SXA9 1104 aa16.88■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Atp2b2Q9R0K7 1198 aa16.88■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Neurod2Q62414 383 aa16.88■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Chmp5Q9D7S9 219 aa16.87■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Phlpp2Q8BXA7 1320 aa16.87■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 CanxP35564 591 aaKnown RBP16.87■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Idi2Q8BFZ6 227 aa16.87■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 IbspQ61711 324 aa16.86■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Arid4aF8VPQ2 1261 aaKnown RBP16.86■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Ltbp4Q8K4G1 1666 aa16.86■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Ipo8Q7TMY7 1010 aa16.85■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Pik3c2aQ61194 1686 aa16.85■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 NinlQ6ZQ12 1394 aa16.85■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 HnrnpmQ9D0E1 729 aaKnown RBP16.84■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Robo1O89026 1612 aa16.84■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Cdk19Q8BWD8 501 aa16.83■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Tmem132aQ922P8 1018 aa16.83■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 PtprvP70289 1705 aa16.83■□□□□ 0.29
Prpf38b-201ENSMUST00000029480 Chrm1P12657 460 aa16.83■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Tex2Q6ZPJ0 1128 aaKnown RBP16.83■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Tns3Q5SSZ5 1440 aa16.83■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Ppp2r3aB2RXC8 1150 aa16.82■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 CastP51125 788 aa16.82■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Plcd3Q8K2J0 785 aa16.82■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Map3k19E9Q3S4 1311 aa16.82■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Map2P20357 1828 aa16.81■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Tsen2Q6P7W5 460 aa16.81■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Dhx30Q99PU8 1217 aaKnown RBP16.81■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Ppp1r9bQ6R891 817 aaKnown RBP16.8■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Dnai1Q8C0M8 701 aa16.8■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Exosc9Q9JHI7 438 aaKnown RBP16.8■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Sart3Q9JLI8 962 aaKnown RBP16.8■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Tbc1d32Q3URV1 1296 aa16.8■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Q4VA45 678 aa16.8■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Abcc10Q8R4P9 1501 aa16.8■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Col14a1Q80X19 1797 aa16.79■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Duxf3A0A0N4SV92 674 aa16.79■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Swt1Q9DBQ9 907 aa16.79■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Camta1A2A891 1682 aa16.79■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Chd4Q6PDQ2 1915 aaKnown RBP16.79■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Q3UJC8 639 aa16.78■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Aldh1l2Q8K009 923 aa16.78■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Map7O88735 730 aa16.78■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Col18a1P39061 1774 aa16.78■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Kiaa1211Q5PR69 1207 aa16.78■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 ScaperF8VQ70 1398 aaKnown RBP16.77■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Trim26Q99PN3 545 aa16.77■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Gtf3c6Q9D8P7 227 aa16.77■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 C3P01027 1663 aa16.77■□□□□ 0.28
Prpf38b-201ENSMUST00000029480 Ccdc183A2AJB1 534 aa16.77■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Cetn4Q8K4K1 168 aa16.77■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Tspyl2Q7TQI8 677 aa16.75■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Rab11fip3Q8CHD8 1047 aa16.75■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Rnf123Q5XPI3 1314 aa16.75■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Cnga1P29974 684 aa16.75■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 BcorQ8CGN4 1759 aa16.75■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Gas2l2Q5SSG4 860 aa16.74■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Rapgef3Q8VCC8 918 aa16.74■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Gnai1B2RSH2 354 aa16.73■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Gnai3Q9DC51 354 aa16.73■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Cgnl1Q6AW69 1298 aa16.72■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 U2af1Q9D883 239 aaKnown RBP16.72■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Uhrf1bp1lA2RSJ4 1457 aa16.72■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Wnk3Q80XP9 1757 aa16.72■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Htatsf1Q8BGC0 757 aa16.72■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Trim30dE9PWL0 497 aa16.71■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Rabep1O35551 862 aa16.71■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Arfgef2A2A5R2 1792 aa16.71■□□□□ 0.27
Prpf38b-201ENSMUST00000029480 Igsf1Q7TQA1 1317 aa16.71■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms