RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 LONP2Q86WA8 852 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZC3HC1Q86WB0 502 aaKnown RBP5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CEP57Q86XR8 500 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CRLF3Q8IUI8 442 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 LRRC49Q8IUZ0 686 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ARHGAP18Q8N392 663 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TEX26Q8N6G2 289 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 IPMKQ8NFU5 416 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ARRDC2Q8TBH0 407 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 FBXO32Q969P5 355 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 HMCESQ96FZ2 354 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 IMP4Q96G21 291 aaKnown RBP5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ABHD17AQ96GS6 310 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ATXN7L3BQ96GX2 97 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NSL1Q96IY1 281 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 VPS39Q96JC1 886 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SPATA17Q96L03 361 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CCDC106Q9BWC9 280 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 VN1R3Q9BXE9 311 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZCCHC2Q9C0B9 1178 aaKnown RBP5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SLC25A51Q9H1U9 297 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 RHOJQ9H4E5 214 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 FBXO44Q9H4M3 255 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ARNT2Q9HBZ2 717 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MRM3Q9HC36 420 aaKnown RBP5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PNPOQ9NVS9 261 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ARMCX1Q9P291 453 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MARCOQ9UEW3 520 aaPredicted RBP5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 DNAJC16Q9Y2G8 782 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 STK38LQ9Y2H1 464 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TCAF1Q9Y4C2 921 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MYO18AQ92614 2054 aaKnown RBP5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PLXNA3P51805 1871 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TTC3P53804 2025 aa5.35□□□□□ -1.55
ERVFRD-3-201ENST00000578561 AP3B1O00203 1094 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 AURKAO14965 403 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 GSC2O15499 205 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TIMM44O43615 452 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 HNRNPCL1O60812 293 aaKnown RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PEX11AO75192 247 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PMPCBO75439 489 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 GJB3O75712 270 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 RTN3O95197 1032 aaPredicted RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 VAPBO95292 243 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ALDH2P05091 517 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MPOP05164 745 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 KITP10721 976 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SLC2A3P11169 496 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 RALBP11234 206 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CPA3P15088 417 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ATF6P18850 670 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MNAT1P51948 309 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ARPP19P56211 112 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 WNT3AP56704 352 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MPP1Q00013 466 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CTBSQ01459 385 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 DLG1Q12959 904 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 DUSP4Q13115 394 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ITGA9Q13797 1035 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 HNRNPDQ14103 355 aaKnown RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CNGA3Q16281 694 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CCDC153Q494R4 210 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 C5orf22Q49AR2 442 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PREPLQ4J6C6 727 aaPredicted RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZNF789Q5FWF6 425 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 RAP1GAP2Q684P5 730 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TIGD7Q6NT04 549 aaPredicted RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 RFWD3Q6PCD5 774 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TFAP2DQ7Z6R9 452 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CIR1Q86X95 450 aaPredicted RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CEP97Q8IW35 865 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 DENND6AQ8IWF6 608 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 RNF168Q8IYW5 571 aaPredicted RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CENPLQ8N0S6 344 aaPredicted RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PGBD5Q8N414 524 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 FBXO27Q8NI29 283 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PIWIL2Q8TC59 973 aaKnown RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 SPPL2BQ8TCT7 592 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PSMG2Q969U7 264 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 VWCEQ96DN2 955 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 BTN2A3PQ96KV6 586 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 GPR78Q96P69 363 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 KLHL5Q96PQ7 755 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 FAM193BQ96PV7 902 aaPredicted RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 BTBD10Q9BSF8 475 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TTLL2Q9BWV7 592 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ZYG11BQ9C0D3 744 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ATXN3LQ9H3M9 355 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 CCSER2Q9H7U1 834 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 EBF2Q9HAK2 575 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 ENTPD7Q9NQZ7 604 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 COMMD8Q9NX08 183 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TAS2R1Q9NYW7 299 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 MARCH2Q9P0N8 246 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 TXNDC16Q9P2K2 825 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 NKX1-2Q9UD57 310 aaPredicted RBP5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 L3MBTL1Q9Y468 752 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PCDHB7Q9Y5E2 793 aa5.34□□□□□ -1.55
ERVFRD-3-201ENST00000578561 PCDHGC4Q9Y5F7 938 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms